Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30539
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U83661-1|AAB71758.2| 1437|Homo sapiens multidrug resistance prot... 37 0.087
AY196484-1|AAO49801.1| 1394|Homo sapiens ATP-binding cassette C5... 37 0.087
AF146074-1|AAD37716.1| 1437|Homo sapiens ABC protein protein. 37 0.087
AF104942-1|AAD04169.1| 1437|Homo sapiens ABC transporter MOAT-C ... 37 0.087
AB209454-1|BAD92691.1| 1430|Homo sapiens Multidrug resistance-as... 37 0.087
AB209103-1|BAD92340.1| 799|Homo sapiens ATP-binding cassette C5... 37 0.087
AB019002-1|BAA76608.1| 1437|Homo sapiens MRP5 protein. 37 0.087
AB005659-1|BAA22887.1| 946|Homo sapiens SMRP protein. 37 0.087
AL392043-11|CAI39951.1| 222|Homo sapiens novel protein protein. 32 1.9
BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation ... 31 3.3
BC022260-1|AAH22260.1| 400|Homo sapiens Unknown (protein for IM... 31 3.3
BC006970-1|AAH06970.1| 363|Homo sapiens Unknown (protein for IM... 31 3.3
AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein pr... 31 3.3
AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein. 31 3.3
AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation ... 31 3.3
AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein. 31 3.3
AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein. 31 3.3
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 5.7
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 5.7
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 5.7
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 5.7
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 5.7
>U83661-1|AAB71758.2| 1437|Homo sapiens multidrug resistance protein
5 protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.087
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 649 NPKRDTSSSEKDPK-RGKKTDSIK-EKALSPEVAKLKKVEDK 530
N K++TS S+K + +G KT S+K EKA+ PE +L ++E+K
Sbjct: 795 NSKKETSGSQKKSQDKGPKTGSVKKEKAVKPEEGQLVQLEEK 836
>AY196484-1|AAO49801.1| 1394|Homo sapiens ATP-binding cassette C5
splicing variant A protein.
Length = 1394
Score = 36.7 bits (81), Expect = 0.087
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 649 NPKRDTSSSEKDPK-RGKKTDSIK-EKALSPEVAKLKKVEDK 530
N K++TS S+K + +G KT S+K EKA+ PE +L ++E+K
Sbjct: 795 NSKKETSGSQKKSQDKGPKTGSVKKEKAVKPEEGQLVQLEEK 836
>AF146074-1|AAD37716.1| 1437|Homo sapiens ABC protein protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.087
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 649 NPKRDTSSSEKDPK-RGKKTDSIK-EKALSPEVAKLKKVEDK 530
N K++TS S+K + +G KT S+K EKA+ PE +L ++E+K
Sbjct: 795 NSKKETSGSQKKSQDKGPKTGSVKKEKAVKPEEGQLVQLEEK 836
>AF104942-1|AAD04169.1| 1437|Homo sapiens ABC transporter MOAT-C
protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.087
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 649 NPKRDTSSSEKDPK-RGKKTDSIK-EKALSPEVAKLKKVEDK 530
N K++TS S+K + +G KT S+K EKA+ PE +L ++E+K
Sbjct: 795 NSKKETSGSQKKSQDKGPKTGSVKKEKAVKPEEGQLVQLEEK 836
>AB209454-1|BAD92691.1| 1430|Homo sapiens Multidrug
resistance-associated protein 5 variant protein.
Length = 1430
Score = 36.7 bits (81), Expect = 0.087
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 649 NPKRDTSSSEKDPK-RGKKTDSIK-EKALSPEVAKLKKVEDK 530
N K++TS S+K + +G KT S+K EKA+ PE +L ++E+K
Sbjct: 788 NSKKETSGSQKKSQDKGPKTGSVKKEKAVKPEEGQLVQLEEK 829
>AB209103-1|BAD92340.1| 799|Homo sapiens ATP-binding cassette C5
splicing variant A variant protein.
Length = 799
Score = 36.7 bits (81), Expect = 0.087
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 649 NPKRDTSSSEKDPK-RGKKTDSIK-EKALSPEVAKLKKVEDK 530
N K++TS S+K + +G KT S+K EKA+ PE +L ++E+K
Sbjct: 693 NSKKETSGSQKKSQDKGPKTGSVKKEKAVKPEEGQLVQLEEK 734
>AB019002-1|BAA76608.1| 1437|Homo sapiens MRP5 protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.087
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 649 NPKRDTSSSEKDPK-RGKKTDSIK-EKALSPEVAKLKKVEDK 530
N K++TS S+K + +G KT S+K EKA+ PE +L ++E+K
Sbjct: 795 NSKKETSGSQKKSQDKGPKTGSVKKEKAVKPEEGQLVQLEEK 836
>AB005659-1|BAA22887.1| 946|Homo sapiens SMRP protein.
Length = 946
Score = 36.7 bits (81), Expect = 0.087
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 649 NPKRDTSSSEKDPK-RGKKTDSIK-EKALSPEVAKLKKVEDK 530
N K++TS S+K + +G KT S+K EKA+ PE +L ++E+K
Sbjct: 304 NSKKETSGSQKKSQDKGPKTGSVKKEKAVKPEEGQLVQLEEK 345
>AL392043-11|CAI39951.1| 222|Homo sapiens novel protein protein.
Length = 222
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -3
Query: 643 KRDTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
K + S EKD ++GK+ + +KE S A +K++ED P ++
Sbjct: 54 KENERSKEKDKEKGKE-EKVKEPKQSQSPAPIKQLEDLPMSIE 95
>BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation
initiation factor 5B protein.
Length = 1220
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 637 DTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
D +K K+G+K + KEK P A +K +++ AK+K
Sbjct: 312 DKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 352
>BC022260-1|AAH22260.1| 400|Homo sapiens Unknown (protein for
IMAGE:4804924) protein.
Length = 400
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 637 DTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
D +K K+G+K + KEK P A +K +++ AK+K
Sbjct: 312 DKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 352
>BC006970-1|AAH06970.1| 363|Homo sapiens Unknown (protein for
IMAGE:4041983) protein.
Length = 363
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 637 DTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
D +K K+G+K + KEK P A +K +++ AK+K
Sbjct: 312 DKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 352
>AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein
protein.
Length = 1132
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 637 DTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
D +K K+G+K + KEK P A +K +++ AK+K
Sbjct: 224 DKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 264
>AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein.
Length = 1220
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 637 DTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
D +K K+G+K + KEK P A +K +++ AK+K
Sbjct: 312 DKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 352
>AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation
factor IF2 protein.
Length = 1220
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 637 DTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
D +K K+G+K + KEK P A +K +++ AK+K
Sbjct: 312 DKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 352
>AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 637 DTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
D +K K+G+K + KEK P A +K +++ AK+K
Sbjct: 312 DKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 352
>AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein.
Length = 1222
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 637 DTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
D +K K+G+K + KEK P A +K +++ AK+K
Sbjct: 314 DKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLK 354
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.7
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -1
Query: 219 NNEDLEKKLRERALKSMKK 163
N +DLEK LRE+AL+SM+K
Sbjct: 879 NLDDLEKHLREKALRSMRK 897
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.7
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -1
Query: 219 NNEDLEKKLRERALKSMKK 163
N +DLEK LRE+AL+SM+K
Sbjct: 879 NLDDLEKHLREKALRSMRK 897
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 5.7
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -1
Query: 219 NNEDLEKKLRERALKSMKK 163
N +DLEK LRE+AL+SM+K
Sbjct: 888 NLDDLEKHLREKALRSMRK 906
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.7
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -1
Query: 219 NNEDLEKKLRERALKSMKK 163
N +DLEK LRE+AL+SM+K
Sbjct: 879 NLDDLEKHLREKALRSMRK 897
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 5.7
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -1
Query: 219 NNEDLEKKLRERALKSMKK 163
N +DLEK LRE+AL+SM+K
Sbjct: 888 NLDDLEKHLREKALRSMRK 906
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,069,298
Number of Sequences: 237096
Number of extensions: 872358
Number of successful extensions: 2604
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2584
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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