Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30539
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 30 2.0
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 29 2.6
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 29 3.5
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 29 3.5
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 29 3.5
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 29 3.5
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 29 3.5
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 29 3.5
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 28 6.0
Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical
protein C27B7.4 protein.
Length = 1274
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/44 (31%), Positives = 31/44 (70%)
Frame = -3
Query: 592 DSIKEKALSPEVAKLKKVEDKPAKVKVDMLNLNLVTKTRKNLKR 461
+++KE+ E ++++ E+KP + ++LN+ + T+T+K+LKR
Sbjct: 8 NTMKEEQEEEERDEIEEKEEKPDAQQQELLNIRIPTQTKKSLKR 51
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 646 PKRDTSSSEKDPK-RGKKTDSIKEKALSPEVAKLKKVEDKPAKVKVD 509
PK++ EK K GKK+D +EK + K K E+K + K D
Sbjct: 65 PKKEEEKKEKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKED 111
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 643 KRDTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVED-KPAKVKV 512
K++ +K K+GKK S +EK+ +PE + K +D K K KV
Sbjct: 14 KKNNVVEKKVDKKGKKNGSKEEKSRNPEKEEKSKFKDLKEEKSKV 58
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 646 PKRD-TSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
P RD P RGK ++ ++ L E AK+K+++ KP + K
Sbjct: 3721 PARDQVKLKTAKPTRGKDLEAGEKVKLKTEKAKIKEIQQKPEQPK 3765
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 646 PKRD-TSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
P RD P RGK ++ ++ L E AK+K+++ KP + K
Sbjct: 3638 PARDQVKLKTAKPTRGKDLEAGEKVKLKTEKAKIKEIQQKPEQPK 3682
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 646 PKRD-TSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
P RD P RGK ++ ++ L E AK+K+++ KP + K
Sbjct: 3959 PARDQVKLKTAKPTRGKDLEAGEKVKLKTEKAKIKEIQQKPEQPK 4003
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 646 PKRD-TSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
P RD P RGK ++ ++ L E AK+K+++ KP + K
Sbjct: 3959 PARDQVKLKTAKPTRGKDLEAGEKVKLKTEKAKIKEIQQKPEQPK 4003
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 646 PKRD-TSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
P RD P RGK ++ ++ L E AK+K+++ KP + K
Sbjct: 3959 PARDQVKLKTAKPTRGKDLEAGEKVKLKTEKAKIKEIQQKPEQPK 4003
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 646 PKRD-TSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVK 515
P RD P RGK ++ ++ L E AK+K+++ KP + K
Sbjct: 3654 PARDQVKLKTAKPTRGKDLEAGEKVKLKTEKAKIKEIQQKPEQPK 3698
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 675 ILMQNLRRKTLNVILLVQKKTQ 610
IL QN+ KTL I+ VQKK Q
Sbjct: 637 ILKQNVNGKTLKTIIFVQKKDQ 658
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -3
Query: 622 EKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVKVDMLNLNLVTKTRKNLKRGKRK 449
E+D K+ +K +EK E K+KK E++ + K + + + K KRK
Sbjct: 145 EEDKKKEEKRKEAEEKKKKDEEEKMKKDEERNKRKKEEEEKKEAKRREDEEKKEAKRK 202
>Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical
protein F10D11.4 protein.
Length = 168
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/66 (24%), Positives = 37/66 (56%)
Frame = -3
Query: 643 KRDTSSSEKDPKRGKKTDSIKEKALSPEVAKLKKVEDKPAKVKVDMLNLNLVTKTRKNLK 464
K+ EK+ K+ K D+ + + ++AK ++ E+ P K ++ + + TK +++ +
Sbjct: 94 KKPDEKVEKEVKKEDKPDNNEPLIKNLKIAKKEQEEENP-KTDLESHDDEVETKKKESRR 152
Query: 463 RGKRKS 446
+ K+KS
Sbjct: 153 QKKKKS 158
>Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical
protein R186.7 protein.
Length = 359
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -3
Query: 589 SIKEKALSPEVAKLKKVEDKPAKVKVDMLNLNLVTKTRKNLKRGKRKS 446
++ K ++ KLK+ E+K +K + L NL+ T + K+ ++K+
Sbjct: 135 ALDSKGREEKIEKLKETENKDSKQRNRRLFSNLIMGTLSSFKKTEKKT 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,004,392
Number of Sequences: 27780
Number of extensions: 154411
Number of successful extensions: 682
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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