Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30538
(392 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0540 + 9340379-9340592,9341250-9342988 77 7e-15
05_05_0109 - 22454539-22456268,22457069-22457279 75 3e-14
03_06_0484 + 34233042-34233258,34235317-34237049 74 5e-14
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 73 6e-14
11_08_0075 + 28173220-28173433,28175348-28177083 73 8e-14
03_02_0546 - 9381989-9383733,9385838-9386054 73 1e-13
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 64 5e-11
08_01_0654 - 5639419-5641449 50 7e-07
05_04_0392 - 20889699-20891726 50 7e-07
05_04_0052 - 17515344-17517353 46 8e-06
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 45 2e-05
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 38 0.002
03_02_0097 + 5602912-5603293,5604599-5604676,5604935-5604963 30 0.58
07_03_1157 - 24419157-24419948 29 1.3
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 29 1.8
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 28 2.3
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 28 3.1
02_04_0413 + 22681957-22682035,22682253-22682788 28 3.1
05_02_0121 - 6834843-6835127 27 4.1
04_03_0574 - 17338777-17339077,17339390-17340222,17340304-173407... 27 4.1
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 27 4.1
01_07_0382 + 43188478-43190919 27 4.1
01_07_0019 + 40494709-40494767,40495619-40495703,40495777-404958... 27 4.1
10_02_0146 - 5837734-5837978,5838005-5838196,5838783-5838936 27 5.4
03_02_0967 + 12786219-12786305,12786716-12786781,12786897-127869... 27 5.4
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 27 7.1
07_01_1101 + 10122804-10123758,10123872-10123910,10124072-101242... 27 7.1
07_01_0551 - 4105721-4105774,4106090-4106159,4106880-4106945,410... 27 7.1
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 27 7.1
04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043 27 7.1
02_04_0617 - 24422922-24422927,24423063-24423134,24423223-244233... 27 7.1
12_01_0453 - 3572745-3572918,3573370-3573430,3573646-3573783,357... 26 9.4
11_04_0037 - 12642141-12642239,12643352-12643618,12643682-126437... 26 9.4
09_06_0344 - 22419152-22419250,22419460-22419554,22419952-224201... 26 9.4
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 26 9.4
03_04_0088 + 17209568-17209876,17209966-17210595,17210846-172110... 26 9.4
02_01_0448 + 3227721-3228968 26 9.4
01_02_0005 - 10112657-10113745,10113903-10114066,10116465-10117041 26 9.4
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 76.6 bits (180), Expect = 7e-15
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +2
Query: 2 DEKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
D+K+ K+ ++DK+ I D + I WLDSNQLA+ EE+E K KELEG+ NPII KMYQ
Sbjct: 561 DDKIASKLPEADKKKIEDAIDGAISWLDSNQLAEAEEFEDKMKELEGVCNPIIAKMYQ 618
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 74.5 bits (175), Expect = 3e-14
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +2
Query: 2 DEKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
DEK+ K++ DK+ I D + I WLD+NQLA+ +E+E K KELEGI NPII KMYQ
Sbjct: 560 DEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKMKELEGICNPIIAKMYQ 617
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 73.7 bits (173), Expect = 5e-14
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = +2
Query: 2 DEKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
DEK+ K+ DK+ I D I+WLD+NQLA+ EE+E K KELEG+ NPII KMYQ
Sbjct: 562 DEKIASKLPADDKKKIEDAVEQAIQWLDNNQLAEVEEFEDKMKELEGLCNPIIAKMYQ 619
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 73.3 bits (172), Expect = 6e-14
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = +2
Query: 2 DEKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
D+K+ K+S DK+ I D + I WLDSNQLA+ +E+E K KELE I NPII KMYQ
Sbjct: 753 DDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 810
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 72.9 bits (171), Expect = 8e-14
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +2
Query: 2 DEKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
DEK+ K+ +DK+ I D + I+WLD NQLA+ +E++ K KELEGI NPII KMYQ
Sbjct: 561 DEKIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDDKMKELEGICNPIIAKMYQ 618
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 72.5 bits (170), Expect = 1e-13
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +2
Query: 2 DEKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
DEK+ K+ DK+ I D + IKWLD NQLA+ +E+E K KELE + NPII+KMYQ
Sbjct: 562 DEKIASKLPADDKKKIEDAIEDAIKWLDGNQLAEADEFEDKMKELESLCNPIISKMYQ 619
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 63.7 bits (148), Expect = 5e-11
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = +2
Query: 5 EKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
+KL +K+ +K+ + + ++WLD NQ A+KEEYE K KE+E + NPII+ +YQ
Sbjct: 586 DKLADKLESEEKEKVEEALKEALEWLDENQTAEKEEYEEKLKEVEAVCNPIISAVYQ 642
Score = 30.3 bits (65), Expect = 0.58
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 2 DEKLKEKISDSDK-QTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGI 145
D+K+KE+I ++ +T + NT+ D ++LADK E E K+K E +
Sbjct: 558 DKKVKERIDARNQLETYVYNMKNTVG--DKDKLADKLESEEKEKVEEAL 604
>08_01_0654 - 5639419-5641449
Length = 676
Score = 50.0 bits (114), Expect = 7e-07
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 8 KLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
K+ + + +K + + +WLD N A KEEYE K +ELE + NP+++ +YQ
Sbjct: 597 KMADAMEGEEKDKVEEAVREAYEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQ 652
>05_04_0392 - 20889699-20891726
Length = 675
Score = 50.0 bits (114), Expect = 7e-07
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +2
Query: 8 KLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
K+ + + +K+ + + +WLD N A KEEYE K +ELE + NP+++ +YQ
Sbjct: 597 KMADAMEGEEKEKVEEAVREAHEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQ 652
>05_04_0052 - 17515344-17517353
Length = 669
Score = 46.4 bits (105), Expect = 8e-06
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 35 DKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
+K+ + +WLD NQ KEEYE K +ELE + NP+++ +YQ
Sbjct: 603 EKEKVEAAVMEAYEWLDGNQDVGKEEYEEKLRELEDVCNPVMSAVYQ 649
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 45.2 bits (102), Expect = 2e-05
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 2 DEKLKEKISDSDKQTILDKCNNTIKWLDSN----QLADKEEYEHKQKELEGIYNPIITKM 169
D + KI D D++ + ++WL+ N + A+KE+YE K KE+E + PII ++
Sbjct: 590 DGGMAGKIGDDDRERMESALTEALEWLEDNDGGARTAEKEDYEEKLKEVEQVCGPIIKQV 649
Query: 170 YQ 175
Y+
Sbjct: 650 YK 651
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 56 KCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPI 157
K +WLD N A+KE+YE K KELE P+
Sbjct: 602 KARAASEWLDGNPAAEKEDYEEKLKELEDACGPV 635
>03_02_0097 + 5602912-5603293,5604599-5604676,5604935-5604963
Length = 162
Score = 30.3 bits (65), Expect = 0.58
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 162 RRCTRVPEESPEVCRASRAEHPEPEVPPPGLRRWPHH 272
RR + +P + R+ R P +PPP RR PHH
Sbjct: 35 RRPSVIPPLRAALSRSPRHPSPLEPIPPPVHRRTPHH 71
>07_03_1157 - 24419157-24419948
Length = 263
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 177 VPE-ESPEVCRASRAEHPEPEVPP-PGLRRWPHH 272
VPE PEV A+ E P+PE+PP P + P H
Sbjct: 173 VPELPKPEVPHAAVPELPKPELPPHPAVPELPKH 206
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +3
Query: 180 PEESPEVCRASRAEH-PEPEVPPPGLRRWPHHRGGRLNQH 296
P SP + +S H PEP P P +P G N H
Sbjct: 114 PNPSPSISPSSSFHHHPEPPSPSPSAPSYPSIADGLANMH 153
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 191 GLLRHPGTSS*LSDCKCLPILSACAHTPPCRPA 93
GL P T+S LP +ACA TPP + A
Sbjct: 588 GLPTPPSTTSNAGKLPSLPAATACATTPPVKTA 620
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 5 EKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPI 157
+K EK+S + Q ++ + + K + Q+ D +E EHK KE+ + N +
Sbjct: 866 QKSSEKVSYLEAQVLVVR-SEMEKMVQKTQMLD-QELEHKNKEISELQNSL 914
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 146 KCLPILSACAHTPPCRPAGWNPAT*WCCCTCRG 48
+C P S H PPC+P CCC C G
Sbjct: 128 QCPPSPSCENHHPPCKPG-------CCCCGCSG 153
>05_02_0121 - 6834843-6835127
Length = 94
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 171 TRVPEESPEVCRASRAEHPEPEVPPPGLRRW 263
T PEE E R R H VPPP RRW
Sbjct: 40 TASPEE--EGSRRRRTGHHRHVVPPPAPRRW 68
>04_03_0574 -
17338777-17339077,17339390-17340222,17340304-17340765,
17340843-17341030,17341244-17341576,17341665-17341796,
17342604-17342643
Length = 762
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 WIPTS-WPTRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLR 257
W T W T + + R WKAF + + A+ P ++P G R
Sbjct: 143 WTATEKWFTFPAEAKDRLKWKAFHKMGYIGKEAIWAQEDAAAAAANVPAPFSDIPEQGAR 202
Query: 258 RWPHHRG 278
W RG
Sbjct: 203 NWSRARG 209
>03_01_0582 -
4318837-4318967,4319219-4319399,4319504-4319701,
4319791-4320053,4320453-4320597
Length = 305
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 137 PILSACAHTPPCRPAGWNPA 78
P+ + A PP P GW+PA
Sbjct: 277 PVATEAAVVPPVAPTGWDPA 296
>01_07_0382 + 43188478-43190919
Length = 813
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 207 ASRAEHPEPEVPPPGLRRWPHHRGGRLN 290
A+ A P P++PP W HH RL+
Sbjct: 9 AASASAPPPQMPPSFHFHWRHHAARRLS 36
>01_07_0019 +
40494709-40494767,40495619-40495703,40495777-40495836,
40495934-40496044,40496127-40496204,40496276-40496347,
40496944-40497057,40498034-40498538,40499011-40499108,
40499185-40499215,40499346-40499520,40499849-40500008,
40501436-40501855,40502313-40503203
Length = 952
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 8 KLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITK 166
++KEK+ +K+ +LD C I + ++ A K+E E K LE + +P IT+
Sbjct: 74 RIKEKLDKFNKEKLLDFCE--ILDIHVSRAATKKE-EVSAKLLEFLESPCITR 123
>10_02_0146 - 5837734-5837978,5838005-5838196,5838783-5838936
Length = 196
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 319 GRFKCGVECWFNRPPRWWGQRL 254
GRF+ G CW+NR W RL
Sbjct: 46 GRFQVGRPCWYNRTA--WDNRL 65
>03_02_0967 +
12786219-12786305,12786716-12786781,12786897-12786971,
12787054-12787162,12787253-12787299,12787396-12787453,
12788193-12788242,12788459-12788504,12788758-12788808,
12789376-12789478,12789923-12789956,12790210-12790224
Length = 246
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 236 LRLRVLRPGSPAYLRGLLRHPGTS 165
LR+R+LR G P + G +R P S
Sbjct: 213 LRIRILRMGFPQFALGCMRSPARS 236
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 26.6 bits (56), Expect = 7.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +3
Query: 105 RRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLRRWPHHRGG 281
RRS+S S R R +R P +S E R + + E PPP R+ H GG
Sbjct: 76 RRSLSPSESPPPPAAKR-ERSSSRAPRDSVE-----RRDSADREAPPPSSRKRKGHEGG 128
>07_01_1101 +
10122804-10123758,10123872-10123910,10124072-10124251,
10124841-10124951,10125448-10125560
Length = 465
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 177 VPEESPEVCRASRAEHPEPEVPPPGLRRWPHHRG 278
+ EE + A+ A+H P PPP H G
Sbjct: 34 INEEQDKAAAATTADHTAPPPPPPAAAAVADHAG 67
>07_01_0551 -
4105721-4105774,4106090-4106159,4106880-4106945,
4106985-4107479,4107491-4107672,4107728-4108222
Length = 453
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 225 PEPEVPPPGLRRWPHHR 275
P P PPPGLR PH R
Sbjct: 149 PRPPAPPPGLR--PHRR 163
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 180 PEESPEVCRASRAEHPEPEVPPP 248
P E P C+ P PE PPP
Sbjct: 136 PCEKPPPCKPEEPPKPPPEKPPP 158
>04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043
Length = 436
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 188 LLRHPGTSS*LSDCKCLPILSACAHTPPCRPAGW 87
+L HP T++ LS C +L + AH P GW
Sbjct: 315 ILAHPSTAAFLSHCGWSSVLESMAHGVPV--IGW 346
>02_04_0617 -
24422922-24422927,24423063-24423134,24423223-24423324,
24423443-24423559,24423626-24423764,24423857-24423963,
24424052-24424161,24425749-24425882,24426005-24426145,
24426241-24426440,24426781-24426941,24427753-24427897
Length = 477
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 83 DSNQLADKEEYEHKQKELEGIY 148
D NQL EEY+ +K L+G++
Sbjct: 285 DVNQLFSTEEYDKVEKALQGVF 306
>12_01_0453 -
3572745-3572918,3573370-3573430,3573646-3573783,
3573882-3574003,3574078-3574233,3575337-3575477,
3575643-3576044
Length = 397
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 180 PEESPEVCRASRAEHPEPEVPPPGLRRW 263
P V R RA P P PP + RW
Sbjct: 37 PRRVAAVLRQCRAAAPPPPAPPDAVPRW 64
>11_04_0037 -
12642141-12642239,12643352-12643618,12643682-12643750,
12643919-12644116,12644262-12644267
Length = 212
Score = 26.2 bits (55), Expect = 9.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 71 IKWLDSNQLADKEEYEHKQKE 133
+KW+DS L ++E + KQ++
Sbjct: 93 VKWIDSGALGEEEVVDEKQRQ 113
>09_06_0344 -
22419152-22419250,22419460-22419554,22419952-22420108,
22420825-22420869,22421080-22421211,22421496-22421594,
22421690-22421785,22421968-22422149,22422242-22422494,
22422867-22422974,22423037-22423094,22423462-22423613,
22423698-22423792,22424172-22424287,22424369-22424495,
22424565-22424661,22424745-22424913,22425879-22426027
Length = 742
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 65 NTIKWLDSNQLADKEEYEHKQKELEGIYNP 154
NT +W D ++ + E+Y KQ+E++ P
Sbjct: 473 NTSEWDDFGEVINPEDYLMKQEEMDNTLMP 502
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 180 PEESPEVCRASRAEHPEPEVPPPGLRRWPHHR 275
PE +P R RA + +P+ PPP P R
Sbjct: 82 PEPAPRKARLPRACNSKPKPPPPPPPERPRRR 113
>03_04_0088 +
17209568-17209876,17209966-17210595,17210846-17211019,
17211434-17211515,17212091-17212278,17212993-17213152,
17213441-17213763,17213860-17213967,17214116-17214189,
17214249-17214361,17214461-17214741
Length = 813
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 278 SSMVGPAPQPRGRHLRLRVLRPGSPAYLRGLLR 180
S G + QP+G LR + RP +P Y ++R
Sbjct: 237 SGSSGGSKQPKGSSLRSKDGRPKNPTYAMKMMR 269
>02_01_0448 + 3227721-3228968
Length = 415
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 245 GRHLRLRVLRPGSPAY 198
GRH +L V RPG+PA+
Sbjct: 191 GRHGKLAVCRPGAPAW 206
>01_02_0005 - 10112657-10113745,10113903-10114066,10116465-10117041
Length = 609
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 266 GPAPQPRGRHLRLRVLRPGSPAYLRGLLRHPGTSS*LSDCKCLPIL 129
GP P PR L ++VL P LR LR + D L +L
Sbjct: 42 GPGPDPRRFSLLIKVLAYDRPGPLRRCLRSLAAADYAGDRVALHVL 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,822,693
Number of Sequences: 37544
Number of extensions: 205225
Number of successful extensions: 1053
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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