Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30538
(392 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 92 1e-19
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 83 9e-17
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 55 2e-08
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 55 2e-08
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 55 2e-08
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 52 2e-07
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 52 2e-07
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 51 3e-07
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 28 2.7
AF039037-7|AAC48231.3| 441|Caenorhabditis elegans Nuclear hormo... 28 2.7
AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical... 28 2.7
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 27 3.6
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 3.6
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 3.6
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 26 8.4
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ... 26 8.4
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 92.3 bits (219), Expect = 1e-19
Identities = 39/58 (67%), Positives = 50/58 (86%)
Frame = +2
Query: 2 DEKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
DEKLK+KIS DK+ I DKC+ +KWLDSNQ A+KEE+EH+QK+LEG+ NPII+K+YQ
Sbjct: 556 DEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 82.6 bits (195), Expect = 9e-17
Identities = 35/58 (60%), Positives = 47/58 (81%)
Frame = +2
Query: 2 DEKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
DEKLK+KIS DK+ I DKC+ +KWLDSNQ A+KEE+E +QK+LEG+ P ++K+YQ
Sbjct: 556 DEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLYQ 613
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 55.2 bits (127), Expect = 2e-08
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +2
Query: 5 EKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMY 172
EKL K++D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 213 EKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 55.2 bits (127), Expect = 2e-08
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +2
Query: 5 EKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMY 172
EKL K++D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 582 EKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +2
Query: 5 EKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
++ K+S D + + T++WLDSN LA+K+E E K KEL+ + I+TKM+Q
Sbjct: 555 DEYSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +2
Query: 5 EKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
++ K+S D + + T++WLDSN LA+K+E E K KEL+ + I+TKM+Q
Sbjct: 555 DEYSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 51.6 bits (118), Expect = 2e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2
Query: 5 EKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
EKL K+ + DK+TI + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 585 EKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 51.6 bits (118), Expect = 2e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2
Query: 5 EKLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
EKL K+ + DK+TI + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 585 EKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 50.8 bits (116), Expect = 3e-07
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 23 ISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 175
+S D + D +T++W++ N LADK+E E K KEL+ I I+TKM+Q
Sbjct: 561 LSAEDAKRAKDAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQ 611
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 5 EKLKEKISDSDK-QTILDKCNNTIKWLDSNQLADKEEYEHKQKEL 136
+ L +K+S++++ Q +D + IKW+D + E+Y E+
Sbjct: 172 DSLHKKLSENERFQKFVDNAEDLIKWMDDKEKEICEKYSKMDFEV 216
>AF039037-7|AAC48231.3| 441|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 204 protein.
Length = 441
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 189 SPEVCRASRAEHPEPEVP---PPGLRRW 263
SPE ASR +P P P PP +++W
Sbjct: 221 SPETIEASRKPNPNPGSPRILPPNVKKW 248
>AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical
protein Y71G12B.10 protein.
Length = 318
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 8 KLKEKISDSDKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPII 160
+L +++S+ QT+ + KW+ QLAD E K + EG+ P++
Sbjct: 44 ELIDRLSECGFQTVETTSFVSPKWVP--QLADHNEIVKKHRRFEGVSYPVL 92
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 67 HHQVAGFQPAGRQGGV*AQAERIGRHLQSDNYEDVPGCRRSPRR 198
H V G G+ +Q +I + + NY+ +P CR +PRR
Sbjct: 18 HLPVQGPSTIASSNGLRSQQSKIIKRPPT-NYKSIPACRLAPRR 60
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 35 DKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITK 166
D +L K I+ L LAD++E KQK ++ I TK
Sbjct: 1042 DSMEMLRKKEKEIRELQQKVLADRDELAEKQKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 35 DKQTILDKCNNTIKWLDSNQLADKEEYEHKQKELEGIYNPIITK 166
D +L K I+ L LAD++E KQK ++ I TK
Sbjct: 1042 DSMEMLRKKEKEIRELQQKVLADRDELAEKQKAIDAQEEEIQTK 1085
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 180 PEESPEVCRASRAEHPEPEVPP--PGLRR 260
PEE+P + R R P PE P P LRR
Sbjct: 573 PEEAPRINRLGRRWQPPPERPYVWPTLRR 601
>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
protein F28H6.4 protein.
Length = 1000
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 102 TRRSMSTSRKNWKAFT 149
T SM+ R+NWKAFT
Sbjct: 200 TELSMAPHRRNWKAFT 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,835,917
Number of Sequences: 27780
Number of extensions: 157027
Number of successful extensions: 647
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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