Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30536X
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    30   1.1  
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    30   1.1  
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 17/74 (22%), Positives = 35/74 (47%)
 Frame = +1

Query: 247 KVLMLVILPHPRTKIADMYKNFAGVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQISTNVV 426
           K  + + LP  R  + D  +   G  ++++   L+          V V++P+F+I   + 
Sbjct: 216 KFTLAIFLPKQRFGLVDALEKINGEYIQNLLNDLKSSY-------VSVQIPKFKIEKELD 268

Query: 427 LNKPLNDMGVYDIF 468
           L + L  +G+ +IF
Sbjct: 269 LKETLEAIGIKEIF 282


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 17/74 (22%), Positives = 35/74 (47%)
 Frame = +1

Query: 247 KVLMLVILPHPRTKIADMYKNFAGVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQISTNVV 426
           K  + + LP  R  + D  +   G  ++++   L+          V V++P+F+I   + 
Sbjct: 216 KFTLAIFLPKQRFGLVDALEKINGEYIQNLLNDLKSSY-------VSVQIPKFKIEKELD 268

Query: 427 LNKPLNDMGVYDIF 468
           L + L  +G+ +IF
Sbjct: 269 LKETLEAIGIKEIF 282


>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical protein
            T01E8.3 protein.
          Length = 1299

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +2

Query: 8    NVLRSDDFQESRLI--LTNVISFKGLWGLPFNKSDTELEPFYNEDRLVIGSVNMMYQKGQ 181
            ++LR+ + +E R+   L+N++ +     +PF+ +    + FY     V G ++ + +KG 
Sbjct: 916  SILRTKE-KEKRIAAELSNLVVY--CQAVPFDPAHIYNDAFYEMCSFVEGKLDKLVEKGL 972

Query: 182  FPFSNLKKLKAF 217
             PF++ K  + +
Sbjct: 973  LPFNSRKLSRVY 984


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,741,963
Number of Sequences: 27780
Number of extensions: 204383
Number of successful extensions: 504
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)