Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30534
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   111   7e-25
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   111   7e-25
BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   111   7e-25
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   111   7e-25
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   111   7e-25
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   111   7e-25
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   111   7e-25
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...   108   8e-24
AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p pro...   107   2e-23
AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,...   107   2e-23
AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,...   107   2e-23
BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    33   0.48 
BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p pro...    31   2.0  
BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p pro...    29   6.0  
AY069344-1|AAL39489.2|  985|Drosophila melanogaster LD05471p pro...    29   6.0  
AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.      29   6.0  
AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-P...    29   6.0  

>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  111 bits (268), Expect = 7e-25
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = +1

Query: 499 KTCYRPTIVKKRTKRFIRHQSDRYDKLKRNLRKPRGIDNRVRRRFKGQYLMPNIGYGSNK 678
           +  YRP IVKKRTK FIRHQSDRY KL    RKP+GIDNRVRRRFKGQYLMPNIGYGSNK
Sbjct: 4   RPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNK 63

Query: 679 KT 684
           +T
Sbjct: 64  RT 65


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  111 bits (268), Expect = 7e-25
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = +1

Query: 499 KTCYRPTIVKKRTKRFIRHQSDRYDKLKRNLRKPRGIDNRVRRRFKGQYLMPNIGYGSNK 678
           +  YRP IVKKRTK FIRHQSDRY KL    RKP+GIDNRVRRRFKGQYLMPNIGYGSNK
Sbjct: 4   RPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNK 63

Query: 679 KT 684
           +T
Sbjct: 64  RT 65


>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  111 bits (268), Expect = 7e-25
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = +1

Query: 499 KTCYRPTIVKKRTKRFIRHQSDRYDKLKRNLRKPRGIDNRVRRRFKGQYLMPNIGYGSNK 678
           +  YRP IVKKRTK FIRHQSDRY KL    RKP+GIDNRVRRRFKGQYLMPNIGYGSNK
Sbjct: 17  RPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNK 76

Query: 679 KT 684
           +T
Sbjct: 77  RT 78


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  111 bits (268), Expect = 7e-25
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = +1

Query: 499 KTCYRPTIVKKRTKRFIRHQSDRYDKLKRNLRKPRGIDNRVRRRFKGQYLMPNIGYGSNK 678
           +  YRP IVKKRTK FIRHQSDRY KL    RKP+GIDNRVRRRFKGQYLMPNIGYGSNK
Sbjct: 4   RPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNK 63

Query: 679 KT 684
           +T
Sbjct: 64  RT 65


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  111 bits (268), Expect = 7e-25
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = +1

Query: 499 KTCYRPTIVKKRTKRFIRHQSDRYDKLKRNLRKPRGIDNRVRRRFKGQYLMPNIGYGSNK 678
           +  YRP IVKKRTK FIRHQSDRY KL    RKP+GIDNRVRRRFKGQYLMPNIGYGSNK
Sbjct: 4   RPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNK 63

Query: 679 KT 684
           +T
Sbjct: 64  RT 65


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  111 bits (268), Expect = 7e-25
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = +1

Query: 499 KTCYRPTIVKKRTKRFIRHQSDRYDKLKRNLRKPRGIDNRVRRRFKGQYLMPNIGYGSNK 678
           +  YRP IVKKRTK FIRHQSDRY KL    RKP+GIDNRVRRRFKGQYLMPNIGYGSNK
Sbjct: 4   RPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNK 63

Query: 679 KT 684
           +T
Sbjct: 64  RT 65


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  111 bits (268), Expect = 7e-25
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = +1

Query: 499 KTCYRPTIVKKRTKRFIRHQSDRYDKLKRNLRKPRGIDNRVRRRFKGQYLMPNIGYGSNK 678
           +  YRP IVKKRTK FIRHQSDRY KL    RKP+GIDNRVRRRFKGQYLMPNIGYGSNK
Sbjct: 17  RPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNK 76

Query: 679 KT 684
           +T
Sbjct: 77  RT 78


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score =  108 bits (259), Expect = 8e-24
 Identities = 49/62 (79%), Positives = 52/62 (83%)
 Frame = +1

Query: 499 KTCYRPTIVKKRTKRFIRHQSDRYDKLKRNLRKPRGIDNRVRRRFKGQYLMPNIGYGSNK 678
           +  YRP IVKKRTK FIRHQSDRY KL    RKP+GIDNRV RRFKGQYLMPNIGYGSNK
Sbjct: 4   RPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYGSNK 63

Query: 679 KT 684
           +T
Sbjct: 64  RT 65


>AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p
           protein.
          Length = 123

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = -2

Query: 256 KKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 77
           +KAIARVYIV HQK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK
Sbjct: 51  RKAIARVYIVMHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRK 110

Query: 76  KSLFPPRVYAVKA 38
           +S+FP R +AVKA
Sbjct: 111 RSVFPQRKFAVKA 123



 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 31/52 (59%), Positives = 33/52 (63%)
 Frame = -3

Query: 405 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVKK 250
           M KVKCSELR KD              L +LRVAKVTGG  SKLSKIRVV+K
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRK 52


>AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,
           isoform A protein.
          Length = 123

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = -2

Query: 256 KKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 77
           +KAIARVYIV HQK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK
Sbjct: 51  RKAIARVYIVMHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRK 110

Query: 76  KSLFPPRVYAVKA 38
           +S+FP R +AVKA
Sbjct: 111 RSVFPQRKFAVKA 123



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 31/52 (59%), Positives = 33/52 (63%)
 Frame = -3

Query: 405 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVKK 250
           M KVKCSELR KD              L +LRVAKVTGG  SKLSKIRVV+K
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRK 52


>AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,
           isoform B protein.
          Length = 123

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = -2

Query: 256 KKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 77
           +KAIARVYIV HQK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK
Sbjct: 51  RKAIARVYIVMHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRK 110

Query: 76  KSLFPPRVYAVKA 38
           +S+FP R +AVKA
Sbjct: 111 RSVFPQRKFAVKA 123



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 31/52 (59%), Positives = 33/52 (63%)
 Frame = -3

Query: 405 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVKK 250
           M KVKCSELR KD              L +LRVAKVTGG  SKLSKIRVV+K
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRK 52


>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 606 Y*QQSPQAIQRSILDAQHRLRFQQEDP 686
           Y QQS   +Q ++ DAQHRLR +Q  P
Sbjct: 7   YRQQSASPLQGTVSDAQHRLRIEQAHP 33


>BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p
           protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 32  YSSFNGIDSRWEERFLSDLFPRLDLCFV 115
           Y++F   + +W +  + D+F RL LCFV
Sbjct: 46  YTTFFDDNIQWSQMVIKDIFQRLQLCFV 73


>BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p protein.
          Length = 1190

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 489  LYVSLRNATVNHAVTLFKVRFEENVT 412
            L VSL++   NHA  LF+  FEE V+
Sbjct: 1150 LIVSLKDGLFNHANVLFRTLFEEGVS 1175


>AY069344-1|AAL39489.2|  985|Drosophila melanogaster LD05471p protein.
          Length = 985

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 489  LYVSLRNATVNHAVTLFKVRFEENVT 412
            L VSL++   NHA  LF+  FEE V+
Sbjct: 945  LIVSLKDGLFNHANVLFRTLFEEGVS 970


>AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.
          Length = 1179

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 489  LYVSLRNATVNHAVTLFKVRFEENVT 412
            L VSL++   NHA  LF+  FEE V+
Sbjct: 1139 LIVSLKDGLFNHANVLFRTLFEEGVS 1164


>AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-PA
            protein.
          Length = 1179

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 489  LYVSLRNATVNHAVTLFKVRFEENVT 412
            L VSL++   NHA  LF+  FEE V+
Sbjct: 1139 LIVSLKDGLFNHANVLFRTLFEEGVS 1164


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,639,919
Number of Sequences: 53049
Number of extensions: 435674
Number of successful extensions: 1345
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)