Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30533
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   6.0  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   6.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   6.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 525 LFINGAKATENYVYVTPYLDFP 590
           +FIN      N  ++TP+ DFP
Sbjct: 13  VFINPLVKYLNIFFITPWYDFP 34


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 636 FFSNHLLYYLCSEIF 592
           FF+ HLL+ LC + F
Sbjct: 188 FFNMHLLFLLCLDYF 202


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +1

Query: 172 GAAQHYCLHCARYFIDEQALNDHFK 246
           G   + C HC R F+    L  H +
Sbjct: 34  GERPYRCEHCDRQFVQVANLRRHLR 58


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 378 KSQTDEDGDAILEES 422
           K++TD+D DA++ +S
Sbjct: 153 KNKTDDDDDALVSDS 167


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +1

Query: 172 GAAQHYCLHCARYFIDEQALNDHFK 246
           G   + C HC R F+    L  H +
Sbjct: 187 GERPYRCEHCDRQFVQVANLRRHLR 211


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 464 VLYIIVINFLLFVW 423
           +LYI+   FL +VW
Sbjct: 144 ILYILATVFLAYVW 157


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 464 VLYIIVINFLLFVW 423
           +LYI+   FL +VW
Sbjct: 144 ILYILATVFLAYVW 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,166
Number of Sequences: 336
Number of extensions: 3252
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)