Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30533
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43332| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_7923| Best HMM Match : Remorin_C (HMM E-Value=1.4) 31 1.00
SB_42825| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_25397| Best HMM Match : zf-C2H2 (HMM E-Value=0.38) 30 1.7
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34) 29 3.0
SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_37894| Best HMM Match : DUF16 (HMM E-Value=9.4) 29 4.0
SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.0
SB_31204| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 29 5.3
SB_34342| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 28 7.0
SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18) 28 7.0
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45) 28 7.0
SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_51373| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_57593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1) 28 9.3
>SB_43332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/67 (53%), Positives = 46/67 (68%)
Frame = +1
Query: 22 KRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHC 201
++K+ H D HLKK++R R R KDLD+I +DLK A KLL+Q+VD DLPG Q YCL C
Sbjct: 5 RKKRMHSNDKHLKKKYRTRKRTKDLDQIHEDLKPVKAAKLLSQEVDTDLPGCGQFYCLQC 64
Query: 202 ARYFIDE 222
A + E
Sbjct: 65 ALRMLKE 71
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 267 LKALELEPYTIEESERAAGHGSFK-KATKRKIVSQNIEKSQTD 392
L+ L+ PYTIEESE AAG GS+ +TK ++V Q+ + + D
Sbjct: 66 LRMLKEVPYTIEESEAAAGMGSYPFTSTKPELVDQHKAEMEID 108
>SB_7923| Best HMM Match : Remorin_C (HMM E-Value=1.4)
Length = 201
Score = 31.1 bits (67), Expect = 1.00
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 16 TYKRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYC 192
T +K +HC + LKK V KK LD+ E EKL+ +K +LD A H+C
Sbjct: 143 TLWKKLHHCNE-ELKKYSHVN--KKALDQFINF--SEQKEKLMKRKDELDKGYEASHHC 196
>SB_42825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 181 QHYCLHCARYFIDEQALNDHFK 246
++ CLHCAR F + LN+H K
Sbjct: 252 EYKCLHCAREFYRKDNLNEHLK 273
>SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 142 LNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKTK 252
+N+ +DL +CL+C + F D Q L DH + K
Sbjct: 200 INEFLDLLEEKLESLHCLYCEKVFKDRQILKDHMRKK 236
>SB_25397| Best HMM Match : zf-C2H2 (HMM E-Value=0.38)
Length = 283
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 163 DLPGAAQHYCLHCARYFIDEQALNDHFKTKVINGD*KHSS 282
D P +++C HC + F+ ++ L H T+V + H +
Sbjct: 236 DDPQGKRNFCDHCGKEFLLKEVLRTHINTEVAKREPSHET 275
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 509 KKIFSSFHQWCQGNRKLCLCHSIFRLSRKISEHK 610
+ + S+H +CQ R+LC H I + ++E K
Sbjct: 349 RAVKQSYHYYCQNTRQLCTGHRIVNVPYYVTEKK 382
>SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 79 NRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFK 246
N+ ++ +Q L ++ K +K + + ++ CLHCAR F + LN H K
Sbjct: 520 NQSFQCEKCEQSLNRKDTFKRHMKKYNQE----KEYKCLHCAREFYRKDNLNQHLK 571
>SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34)
Length = 405
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 49 THLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCL 195
T +K R + + ++D ++ D D+ +E A L ++K L +PG Q L
Sbjct: 127 TKIKNRRQEGSDQEDSEDDDSDIDDELAGYLYDKKPSLPIPGYGQSMVL 175
>SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 294 TIEESERAAGHGSFKKATKRKIVSQNIEKSQTDEDGDAILEES 422
T +ESE+AA KKA + ++ + QT +D +A+ EES
Sbjct: 27 TFKESEKAAKETKDKKAKSARPSVKDGKPQQTKKDKEAVNEES 69
>SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 22 KRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEK 138
KRK Y+C T KR R +++++E +++ +EE E+
Sbjct: 111 KRKLYYCNLTITIKRRRREEEEEEVEEEEEEEEEEEEEE 149
>SB_37894| Best HMM Match : DUF16 (HMM E-Value=9.4)
Length = 244
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 507 PKRYSALFINGAKATENYVYVTPYLDFP 590
P + A G++A E YVYV LDFP
Sbjct: 164 PGLFKATLKYGSRAAEQYVYVIKDLDFP 191
>SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 509 KKIFSSFHQWCQGNRKLCLCHSI 577
KK+FSSF QW + K+ C+S+
Sbjct: 771 KKVFSSFLQWGRNKTKILECNSL 793
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 166 LPGAAQHYCLHCARYFIDEQALNDHFKT 249
LP +H C+ C + F AL HF+T
Sbjct: 181 LPRERKHECMECQKLFDSPNALEVHFRT 208
>SB_31204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Frame = +1
Query: 181 QHYCLHCARYFIDEQALNDHFKTKV---INGD*---KHSSLNLIL*KSQRELLATGVSKK 342
Q+ C CAR+ I +N H+ V +NGD K S ++ ATG K
Sbjct: 721 QYQCTTCARHEIH---INAHYAVVVFTALNGDSISVKPDSFLAQSCQASTGFFATGTKSK 777
Query: 343 QQNEKLFHKILRNLKQMKMVMLF*RKVQTKRRKLMT 450
+F L+++K F K +TK+ + +T
Sbjct: 778 DIPASIFGVFLKDIKTALQTSYFATKTETKKGEEIT 813
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +1
Query: 79 NRKKDLDEIDQDLKE---ENAEKLLNQKVDL----DLPGAAQHYCLHCARYFIDEQALND 237
NR + L + +++ N +K K DL A +H C C + + D ++L D
Sbjct: 228 NRNRHLRTVHSNIRPYTCNNCQKTFKTKCDLKQHISRHNAGKHQCNVCKKSYADLKSLED 287
Query: 238 HFKTKV 255
H ++ V
Sbjct: 288 HLRSHV 293
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 184 HYCLHCARYFIDEQALNDHFKTKVIN 261
+YC HC R F + L H KT V N
Sbjct: 298 NYCDHCNRTFYIRELLRQHIKTVVKN 323
>SB_34342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = +3
Query: 300 EESERAAGHGSFKKAT-----KRKIVSQNIEKSQTDEDGDAILEESP 425
+ SER AGH + T + + S ++ + D+DGD + E P
Sbjct: 460 DRSERQAGHSQWGSTTSLNISRGSVSSYDVAHGEDDDDGDGLHRERP 506
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 142 LNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKTKV 255
L Q + P A ++YC HC + F + AL H K V
Sbjct: 992 LQQNPAKEDPRANENYCDHCDKTFEETDALRLHVKKAV 1029
>SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18)
Length = 283
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 404 ITIFICLRFLNIL*NNFSFCCFFETPVASSSL*LFYSIRFKLECF 270
+ +F C L +L F CCF+ + A ++ L +RF CF
Sbjct: 114 VVVFRCCLLLLLLFLRFYCCCFYGSIAAVFTVLLLLFLRFYCCCF 158
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 28.3 bits (60), Expect = 7.0
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 RKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKTKVIN 261
R+K L ++ ++LK KLL ++ +L Q R F+ EQ H K
Sbjct: 290 RRKQLQKMQEELKHR---KLLQEQEELKHRKLLQEQEELKHRKFLQEQEELKHRKLLQEK 346
Query: 262 GD*-KHSSLNLIL*K-SQRELLATGVSKKQQNEKLFHKILRNLKQMKMVMLF*RKVQTKR 435
D KH L + QRELL KKQQ + L+ ++++ L + + K
Sbjct: 347 EDEIKHRKLIQQQEELKQRELLKQQEVKKQQKLLKQQERLKQQEEIRHRQLLKEQEELKH 406
Query: 436 RKLM 447
RKL+
Sbjct: 407 RKLL 410
>SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45)
Length = 853
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 142 VIFQHFLPLNLGLFHPNLSFCYALSTAFLNVC 47
+I F+P ++ + + F YALST FLN+C
Sbjct: 13 LILAVFVPSHIAVIAISSFFGYALSTDFLNLC 44
>SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 666
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 593 KISEHK*YKR*FEKKEIPL*F*KLEDLWHVYEELRQKRNQY 715
KIS+H+ YK+ + E L + E+L H +EEL+QK Q+
Sbjct: 265 KISKHEHYKKQVLESEARLA--EGEELSHDHEELKQKEKQH 303
>SB_51373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 16 TYKRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVD 159
T+K +++ D H+ R R + +D + D D+ N ++ N +VD
Sbjct: 7 THKDDEWNDSDRHISPRVRHKKTHEDDEWSDLDINTSNRKRHKNTRVD 54
>SB_57593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 237 SFQDKSHKRRLKALELEPYTIEESERAAGHGSFKKATKRKIVSQNIEKSQTDEDGDAILE 416
S QD+++ R+ +A + +RA HG + + N K T ED +LE
Sbjct: 12 SRQDRANSRQDRANSRQDRANSRQDRANSHGKIEHMWPAECAEINKSKMATGEDERTVLE 71
>SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)
Length = 1188
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 19 YKRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLK 120
YK K++HCG K VR+ +K+ D+I +L+
Sbjct: 661 YKEKRFHCGQVDEK----VRSLQKERDQIFSELE 690
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,383,134
Number of Sequences: 59808
Number of extensions: 350437
Number of successful extensions: 1246
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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