Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30533
         (751 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL391650-8|CAI17137.1|  134|Homo sapiens zinc finger protein 593...    60   6e-09
D45213-1|BAA20369.1|  116|Homo sapiens zinc finger protein protein.    58   3e-08
BC019267-1|AAH19267.1|  116|Homo sapiens zinc finger protein 593...    58   3e-08
BC002580-1|AAH02580.1|  116|Homo sapiens zinc finger protein 593...    58   3e-08

>AL391650-8|CAI17137.1|  134|Homo sapiens zinc finger protein 593
           protein.
          Length = 134

 Score = 60.5 bits (140), Expect = 6e-09
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = +1

Query: 55  LKKRWRVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQ 225
           L ++ + + R+ DLDEI ++L+ + + +     N + D DLPG   H CL CARYFID  
Sbjct: 15  LARQMKAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDST 74

Query: 226 ALNDHFKTK 252
            L  HF++K
Sbjct: 75  NLKTHFRSK 83



 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = +3

Query: 222 TSFE*SFQDKSHKRRLKALELEPYTIEESERAAGHGSF 335
           T+ +  F+ K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 74  TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 111


>D45213-1|BAA20369.1|  116|Homo sapiens zinc finger protein protein.
          Length = 116

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = +1

Query: 70  RVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQALNDH 240
           + + R+ DLDEI ++L+ + + +     N + D DLPG   H CL CARYFID   L  H
Sbjct: 2   KAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTH 61

Query: 241 FKTK 252
           F++K
Sbjct: 62  FRSK 65



 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = +3

Query: 222 TSFE*SFQDKSHKRRLKALELEPYTIEESERAAGHGSF 335
           T+ +  F+ K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 56  TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 93


>BC019267-1|AAH19267.1|  116|Homo sapiens zinc finger protein 593
           protein.
          Length = 116

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = +1

Query: 70  RVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQALNDH 240
           + + R+ DLDEI ++L+ + + +     N + D DLPG   H CL CARYFID   L  H
Sbjct: 2   KAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTH 61

Query: 241 FKTK 252
           F++K
Sbjct: 62  FRSK 65



 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = +3

Query: 222 TSFE*SFQDKSHKRRLKALELEPYTIEESERAAGHGSF 335
           T+ +  F+ K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 56  TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 93


>BC002580-1|AAH02580.1|  116|Homo sapiens zinc finger protein 593
           protein.
          Length = 116

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = +1

Query: 70  RVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQALNDH 240
           + + R+ DLDEI ++L+ + + +     N + D DLPG   H CL CARYFID   L  H
Sbjct: 2   KAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTH 61

Query: 241 FKTK 252
           F++K
Sbjct: 62  FRSK 65



 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = +3

Query: 222 TSFE*SFQDKSHKRRLKALELEPYTIEESERAAGHGSF 335
           T+ +  F+ K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 56  TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,881,001
Number of Sequences: 237096
Number of extensions: 1643049
Number of successful extensions: 4818
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4814
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)