Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30532
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    26   1.4  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    26   1.4  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    25   2.4  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   2.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   5.4  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    24   5.4  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   9.5  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +3

Query: 225 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 311
           GT +VPL   RRSP  P       HL A HS
Sbjct: 149 GTSSVPLTIHRRSPGVPHHVAEPQHLGATHS 179


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +3

Query: 225 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 311
           GT +VPL   RRSP  P       HL A HS
Sbjct: 149 GTSSVPLTIHRRSPGVPHHVAEPQHLGATHS 179


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +3

Query: 225 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 311
           GT +VPL   RRSP  P       H+ A HS
Sbjct: 125 GTSSVPLTIHRRSPGVPHHVPEPQHMGATHS 155


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +3

Query: 225 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 311
           GT +VPL   RRSP  P       H+ A HS
Sbjct: 125 GTSSVPLTIHRRSPGVPHHVPEPQHMGATHS 155


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +2

Query: 314 KHVR--RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 445
           KHV+  +   +LK  +VC+     +  +RVV  GI  SGL L +GP
Sbjct: 109 KHVKFCQFAFDLKCDSVCV---NPYHYERVVSPGIDLSGLTLQSGP 151


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 22/101 (21%), Positives = 40/101 (39%)
 Frame = +2

Query: 407 GILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTEFHSATSNCQNTSMMITSRRIRSASN 586
           GI+ S  LL+      +  P+ R          T   +A +N     +      IR  + 
Sbjct: 425 GIMASNSLLMQLQADLSGIPVLRTEVHEPAALGTAMAAAQAN--GVDLYKLEAEIRGYAG 482

Query: 587 VQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSE 709
           VQS+ +  + +  +++RN  +      ++R      SK SE
Sbjct: 483 VQSHHETFLPTTTEEERNARYTKWKMAVQRSLGWAVSKKSE 523


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 518 SEIRWRCRSHSAEEYGVA 465
           S  RWR R   AE +GVA
Sbjct: 232 SGTRWRTRHFDAELFGVA 249


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,983
Number of Sequences: 2352
Number of extensions: 15515
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)