Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30531
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13690-1|AAA28875.1|  246|Drosophila melanogaster ribosomal prot...   153   2e-37
BT024258-1|ABC86320.1|  253|Drosophila melanogaster IP15838p pro...   153   2e-37
AY118971-1|AAM50831.1|  246|Drosophila melanogaster LD47488p pro...   153   2e-37
AE014297-3319|AAF56129.1|  246|Drosophila melanogaster CG6779-PA...   153   2e-37
X72921-1|CAA51425.1|  246|Drosophila melanogaster ribosomal prot...   150   2e-36
AE014298-2726|AAF48847.1|  494|Drosophila melanogaster CG15046-P...    33   0.49 
AE014296-1922|AAF50084.1|  557|Drosophila melanogaster CG7616-PA...    29   6.0  

>L13690-1|AAA28875.1|  246|Drosophila melanogaster ribosomal protein
           S3/AP endonucleaseDNA repair protein protein.
          Length = 246

 Score =  153 bits (372), Expect = 2e-37
 Identities = 74/84 (88%), Positives = 77/84 (91%)
 Frame = +1

Query: 256 VQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAR 435
           VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+
Sbjct: 75  VQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 134

Query: 436 GCEVVVSGKLRGQRAKSMKFVDGL 507
           GCEVVVSGKLRGQRAKSMKFVDGL
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGL 158



 Score =  126 bits (303), Expect = 4e-29
 Identities = 61/77 (79%), Positives = 68/77 (88%)
 Frame = +2

Query: 53  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 232
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66

Query: 233 RIRELTSEYRSDSTFQS 283
           RIRELT+  +    F++
Sbjct: 67  RIRELTAMVQKRFNFET 83



 Score =  107 bits (256), Expect = 2e-23
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +3

Query: 510 IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEP 689
           IHSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E 
Sbjct: 160 IHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEK 219

Query: 690 V 692
           +
Sbjct: 220 I 220


>BT024258-1|ABC86320.1|  253|Drosophila melanogaster IP15838p
           protein.
          Length = 253

 Score =  153 bits (372), Expect = 2e-37
 Identities = 74/84 (88%), Positives = 77/84 (91%)
 Frame = +1

Query: 256 VQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAR 435
           VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+
Sbjct: 82  VQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 141

Query: 436 GCEVVVSGKLRGQRAKSMKFVDGL 507
           GCEVVVSGKLRGQRAKSMKFVDGL
Sbjct: 142 GCEVVVSGKLRGQRAKSMKFVDGL 165



 Score =  126 bits (303), Expect = 4e-29
 Identities = 61/77 (79%), Positives = 68/77 (88%)
 Frame = +2

Query: 53  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 232
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR
Sbjct: 14  ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 73

Query: 233 RIRELTSEYRSDSTFQS 283
           RIRELT+  +    F++
Sbjct: 74  RIRELTAMVQKRFNFET 90



 Score =  107 bits (256), Expect = 2e-23
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +3

Query: 510 IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEP 689
           IHSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E 
Sbjct: 167 IHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEK 226

Query: 690 V 692
           +
Sbjct: 227 I 227


>AY118971-1|AAM50831.1|  246|Drosophila melanogaster LD47488p
           protein.
          Length = 246

 Score =  153 bits (372), Expect = 2e-37
 Identities = 74/84 (88%), Positives = 77/84 (91%)
 Frame = +1

Query: 256 VQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAR 435
           VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+
Sbjct: 75  VQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 134

Query: 436 GCEVVVSGKLRGQRAKSMKFVDGL 507
           GCEVVVSGKLRGQRAKSMKFVDGL
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGL 158



 Score =  126 bits (303), Expect = 4e-29
 Identities = 61/77 (79%), Positives = 68/77 (88%)
 Frame = +2

Query: 53  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 232
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66

Query: 233 RIRELTSEYRSDSTFQS 283
           RIRELT+  +    F++
Sbjct: 67  RIRELTAMVQKRFNFET 83



 Score =  107 bits (256), Expect = 2e-23
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +3

Query: 510 IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEP 689
           IHSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E 
Sbjct: 160 IHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEK 219

Query: 690 V 692
           +
Sbjct: 220 I 220


>AE014297-3319|AAF56129.1|  246|Drosophila melanogaster CG6779-PA
           protein.
          Length = 246

 Score =  153 bits (372), Expect = 2e-37
 Identities = 74/84 (88%), Positives = 77/84 (91%)
 Frame = +1

Query: 256 VQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAR 435
           VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+
Sbjct: 75  VQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 134

Query: 436 GCEVVVSGKLRGQRAKSMKFVDGL 507
           GCEVVVSGKLRGQRAKSMKFVDGL
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGL 158



 Score =  126 bits (303), Expect = 4e-29
 Identities = 61/77 (79%), Positives = 68/77 (88%)
 Frame = +2

Query: 53  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 232
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66

Query: 233 RIRELTSEYRSDSTFQS 283
           RIRELT+  +    F++
Sbjct: 67  RIRELTAMVQKRFNFET 83



 Score =  107 bits (256), Expect = 2e-23
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +3

Query: 510 IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEP 689
           IHSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E 
Sbjct: 160 IHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEK 219

Query: 690 V 692
           +
Sbjct: 220 I 220


>X72921-1|CAA51425.1|  246|Drosophila melanogaster ribosomal protein
           S3 protein.
          Length = 246

 Score =  150 bits (364), Expect = 2e-36
 Identities = 73/84 (86%), Positives = 76/84 (90%)
 Frame = +1

Query: 256 VQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAR 435
           VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL G LAVRRACYGVLR+IMESGA+
Sbjct: 75  VQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAK 134

Query: 436 GCEVVVSGKLRGQRAKSMKFVDGL 507
           GCEVVVSGKLRGQRAKSMKFVDGL
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGL 158



 Score =  121 bits (292), Expect = 8e-28
 Identities = 59/77 (76%), Positives = 66/77 (85%)
 Frame = +2

Query: 53  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 232
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP  +EIIIMAT+TQ VL EKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGR 66

Query: 233 RIRELTSEYRSDSTFQS 283
           RIRELT+  +    F++
Sbjct: 67  RIRELTAMVQKRFNFET 83



 Score =  107 bits (256), Expect = 2e-23
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = +3

Query: 510 IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEP 689
           IHSGDPCNDYV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E 
Sbjct: 160 IHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEK 219

Query: 690 V 692
           +
Sbjct: 220 I 220


>AE014298-2726|AAF48847.1|  494|Drosophila melanogaster CG15046-PA
           protein.
          Length = 494

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 48  TIFQRSENLLEMGFSRQNSMSSSLGSWPRTATPAWKCGSLPS 173
           T  QRS +L+ +G+ +       L   P    P W CG LP+
Sbjct: 364 TRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWACGDLPN 405


>AE014296-1922|AAF50084.1|  557|Drosophila melanogaster CG7616-PA
           protein.
          Length = 557

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 181 LRADGSDPHFHAGVAVLGQLPSEELIEFCLEN 86
           LR D +DP +   V +L +  +E L+E CL N
Sbjct: 84  LRLDENDPEYETKVKLLHKKSAERLLETCLLN 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,114,749
Number of Sequences: 53049
Number of extensions: 767075
Number of successful extensions: 3014
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3013
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)