Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30531
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal prote... 149 1e-36
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 30 1.4
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 30 1.4
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 29 4.2
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.2
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 29 4.2
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 29 4.2
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 29 4.2
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 29 4.2
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 29 4.2
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 29 4.2
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 29 4.2
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 29 4.2
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 7.3
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical pr... 27 9.7
U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein... 27 9.7
AC024817-56|AAK68528.1| 166|Caenorhabditis elegans Hypothetical... 27 9.7
>U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 3 protein.
Length = 247
Score = 149 bits (362), Expect = 1e-36
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +1
Query: 256 VQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAR 435
VQKRF E SVELYAEKV+ RGLCA+AQ ESLRYKL+GGLAVRRACYGVLRFIMESGA+
Sbjct: 75 VQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQ 134
Query: 436 GCEVVVSGKLRGQRAKSMKFVDGL 507
G EV+VSGKLRGQRAK+MKFVDGL
Sbjct: 135 GVEVIVSGKLRGQRAKAMKFVDGL 158
Score = 110 bits (265), Expect = 8e-25
Identities = 54/73 (73%), Positives = 64/73 (87%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MAVN-NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSV 214
MA N N++KK+K V G+FKAELN FL +ELAEDGYSGVEVR TP R+E+IIMATRTQ+V
Sbjct: 1 MAANQNVTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNV 60
Query: 215 LGEKGRRIRELTS 253
LGE+GRRI+ELTS
Sbjct: 61 LGERGRRIKELTS 73
Score = 93.1 bits (221), Expect = 2e-19
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = +3
Query: 510 IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEP 689
IHSG P NDY+ A RHV LRQGV+GIKVKIMLP+D +G+NGP+ PDH+ + EP++E
Sbjct: 160 IHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEV 219
Query: 690 VP 695
+P
Sbjct: 220 LP 221
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +2
Query: 542 QHCYQTCASQTRSTRNQGQNHVA 610
Q CY CAS T ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +2
Query: 542 QHCYQTCASQTRSTRNQGQNHVA 610
Q CY CAS T ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 29 VAIMAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGY 142
+A +I KK F GDG F E E+ +DGY
Sbjct: 885 IAARLSRDIPKKFSFKGDGEFFVSQREVFENEILDDGY 922
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 29 VAIMAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGY 142
+A +I KK F GDG F E E+ +DGY
Sbjct: 885 IAARLSRDIPKKFSFKGDGEFFVSQREVFENEILDDGY 922
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 688 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 587
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 688 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 587
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
>Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical
protein Y49E10.6 protein.
Length = 136
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein 71
protein.
Length = 136
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 309 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 413
GG P RYRPG ++ + R + T L+ PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68
>AC024817-56|AAK68528.1| 166|Caenorhabditis elegans Hypothetical
protein Y54G2A.3 protein.
Length = 166
Score = 27.5 bits (58), Expect = 9.7
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = +3
Query: 57 QRSENLLEMGFSRQN-----SMSSSLGSWPRTATPAWK--CGSLPSARRSLLWPPGHRVC 215
QR + L G + +N S S SL P+ P+ K S P R+L PG V
Sbjct: 79 QRRKFSLACGLNHRNGNGEPSSSVSLRRRPKKK-PSMKEHSSSAPVLSRNLS-QPGESVS 136
Query: 216 SERKDAESVSSLPSTEAIQH 275
RK+A +VS+ + IQH
Sbjct: 137 ESRKEASAVSNRRKSAPIQH 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,041,472
Number of Sequences: 27780
Number of extensions: 377321
Number of successful extensions: 1286
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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