Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30529X
         (354 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   0.40 
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   2.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   8.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   8.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    20   8.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    20   8.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   8.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   8.6  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 0.40
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 58  PASTRQXPGPSRKPSISTCLSCGHDRTP 141
           P+ST+    PSR  + + C   G+ R P
Sbjct: 404 PSSTKAPAPPSRDLTTTLCTKAGYVRDP 431


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 116 CPAATTGRRRFLLATDGYP 172
           CP A  G R+F+  T   P
Sbjct: 104 CPKAKPGERKFIKVTTKAP 122


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 349 HTRHLGLWDTVHFIL 305
           ++ HL LW TV FIL
Sbjct: 251 YSLHLLLWITVTFIL 265


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 134  LSWPQDKHVEIEGFLDGP 81
            +S P D+ +E   F DGP
Sbjct: 1162 VSQPSDEVMENSWFYDGP 1179


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 134  LSWPQDKHVEIEGFLDGP 81
            +S P D+ +E   F DGP
Sbjct: 1162 VSQPSDEVMENSWFYDGP 1179


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 87  VKKTLNFNMFVLRPRQ 134
           ++K  +FN ++ RPR+
Sbjct: 19  LEKEFHFNKYLCRPRR 34


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 323 HRPLHSQQH 297
           H+P H QQH
Sbjct: 179 HQPHHQQQH 187


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +2

Query: 161 DGYPDWGGIGIFGATRT 211
           + YPD+   G F   +T
Sbjct: 308 NNYPDFSAAGFFSINKT 324


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 323 HRPLHSQQH 297
           H+P H QQH
Sbjct: 181 HQPHHQQQH 189


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 87  VKKTLNFNMFVLRPRQ 134
           ++K  +FN ++ RPR+
Sbjct: 150 LEKEFHFNKYLCRPRR 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,456
Number of Sequences: 336
Number of extensions: 1888
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)