Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30529X
(354 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014492-1|AAH14492.1| 210|Homo sapiens LOC200420 protein. 30 2.4
AB053446-1|BAB61903.2| 3434|Homo sapiens KIAA1773 protein protein. 30 2.4
AB000895-1|BAA21133.1| 137|Homo sapiens cadherin FIB1 protein. 30 2.4
L34838-1|AAB08516.1| 139|Homo sapiens EPIL protein. 29 4.1
BC026254-1|AAH26254.1| 139|Homo sapiens insulin-like 4 (placent... 29 4.1
AL133547-2|CAH70506.1| 139|Homo sapiens insulin-like 4 (placent... 29 4.1
AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1 s... 29 4.1
AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1 p... 29 4.1
AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein. 29 4.1
BC043488-1|AAH43488.1| 595|Homo sapiens C13orf18 protein protein. 28 7.2
BC004495-1|AAH04495.1| 429|Homo sapiens C13orf18 protein protein. 28 7.2
AL139801-3|CAH71682.1| 645|Homo sapiens chromosome 13 open read... 28 7.2
AK025215-1|BAB15086.1| 635|Homo sapiens protein ( Homo sapiens ... 28 7.2
>BC014492-1|AAH14492.1| 210|Homo sapiens LOC200420 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 194 IFQYRPNLDTRPWRVKIFGVLSWPQDKHVEIEGFLDGPG 78
I + P T+PWR ++ +W Q +H++ G+L GPG
Sbjct: 32 ISRLEPVTKTKPWREPLWE-RNW-QGQHLDSRGYLAGPG 68
>AB053446-1|BAB61903.2| 3434|Homo sapiens KIAA1773 protein protein.
Length = 3434
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Frame = -1
Query: 333 DSGTPSTSFSAAFGIDVDTFSINSE*F------PQSSPEAS*PTSFLVRVAPNIP 187
DSG+P AAF + V + N+ F P+ PE + P SF+VRV P
Sbjct: 582 DSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLPEVALPGSFVVRVTARDP 636
>AB000895-1|BAA21133.1| 137|Homo sapiens cadherin FIB1 protein.
Length = 137
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Frame = -1
Query: 333 DSGTPSTSFSAAFGIDVDTFSINSE*F------PQSSPEAS*PTSFLVRVAPNIP 187
DSG+P AAF + V + N+ F P+ PE + P SF+VRV P
Sbjct: 13 DSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLPEVALPGSFVVRVTARDP 67
>L34838-1|AAB08516.1| 139|Homo sapiens EPIL protein.
Length = 139
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -1
Query: 354 TITPG--ILDSGTPSTSFSAAFGIDVDTFSINSE*FPQSSPEAS*PTS 217
T TPG +L+SG P S + D SE P SPE P S
Sbjct: 51 TTTPGGWLLESGRPKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLS 98
>BC026254-1|AAH26254.1| 139|Homo sapiens insulin-like 4 (placenta)
protein.
Length = 139
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -1
Query: 354 TITPG--ILDSGTPSTSFSAAFGIDVDTFSINSE*FPQSSPEAS*PTS 217
T TPG +L+SG P S + D SE P SPE P S
Sbjct: 51 TTTPGGWLLESGRPKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLS 98
>AL133547-2|CAH70506.1| 139|Homo sapiens insulin-like 4 (placenta)
protein.
Length = 139
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -1
Query: 354 TITPG--ILDSGTPSTSFSAAFGIDVDTFSINSE*FPQSSPEAS*PTS 217
T TPG +L+SG P S + D SE P SPE P S
Sbjct: 51 TTTPGGWLLESGRPKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLS 98
>AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1
short form protein protein.
Length = 807
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 72 AXARPVKKTLNFNMFVLRPRQDAEDFYSPRTGIQIGAVLEYLVQRVQG 215
A P+ + +FVL +A +PR G IGAV E LV R+ G
Sbjct: 540 AGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTIGAVSE-LVPRLVG 586
>AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1
protein.
Length = 950
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 72 AXARPVKKTLNFNMFVLRPRQDAEDFYSPRTGIQIGAVLEYLVQRVQG 215
A P+ + +FVL +A +PR G IGAV E LV R+ G
Sbjct: 540 AGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTIGAVSE-LVPRLVG 586
>AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein.
Length = 807
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 72 AXARPVKKTLNFNMFVLRPRQDAEDFYSPRTGIQIGAVLEYLVQRVQG 215
A P+ + +FVL +A +PR G IGAV E LV R+ G
Sbjct: 540 AGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTIGAVSE-LVPRLVG 586
>BC043488-1|AAH43488.1| 595|Homo sapiens C13orf18 protein protein.
Length = 595
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 112 CLSCGHDRTPKIFTRHGRVSRLGRYWNIWCNAYKE*C 222
C CG PK R LG+Y+ C++Y E C
Sbjct: 367 CAGCGTPVEPKFVKRLRYCEYLGKYFCDCCHSYAESC 403
>BC004495-1|AAH04495.1| 429|Homo sapiens C13orf18 protein protein.
Length = 429
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 112 CLSCGHDRTPKIFTRHGRVSRLGRYWNIWCNAYKE*C 222
C CG PK R LG+Y+ C++Y E C
Sbjct: 201 CAGCGTPVEPKFVKRLRYCEYLGKYFCDCCHSYAESC 237
>AL139801-3|CAH71682.1| 645|Homo sapiens chromosome 13 open reading
frame 18 protein.
Length = 645
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 112 CLSCGHDRTPKIFTRHGRVSRLGRYWNIWCNAYKE*C 222
C CG PK R LG+Y+ C++Y E C
Sbjct: 444 CAGCGTPVEPKFVKRLRYCEYLGKYFCDCCHSYAESC 480
>AK025215-1|BAB15086.1| 635|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21562 fis, clone COL06420. ).
Length = 635
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 112 CLSCGHDRTPKIFTRHGRVSRLGRYWNIWCNAYKE*C 222
C CG PK R LG+Y+ C++Y E C
Sbjct: 434 CAGCGTPVEPKFVKRLRYCEYLGKYFCDCCHSYAESC 470
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,088,018
Number of Sequences: 237096
Number of extensions: 1302205
Number of successful extensions: 3752
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3752
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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