Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30529X
         (354 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061111-1|AAL28659.1|  494|Drosophila melanogaster LD09584p pro...    28   3.9  
AE014296-2311|AAF49794.2|  494|Drosophila melanogaster CG8745-PA...    28   3.9  

>AY061111-1|AAL28659.1|  494|Drosophila melanogaster LD09584p
           protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 17  HSHVSRLVSIGRYSLPQPGXGQARQENPQFQHVCPAATTGRRRFLLATDG-YPD 175
           H H+  ++ +  Y   QPG G+A+   P + HV P       +F   TD  YPD
Sbjct: 151 HGHLQSVMEVSPYKFNQPG-GEAK---PDYVHVAPCPDVYGGKF---TDKMYPD 197


>AE014296-2311|AAF49794.2|  494|Drosophila melanogaster CG8745-PA
           protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 17  HSHVSRLVSIGRYSLPQPGXGQARQENPQFQHVCPAATTGRRRFLLATDG-YPD 175
           H H+  ++ +  Y   QPG G+A+   P + HV P       +F   TD  YPD
Sbjct: 151 HGHLQSVMEVSPYKFNQPG-GEAK---PDYVHVAPCPDVYGGKF---TDKMYPD 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,689,621
Number of Sequences: 53049
Number of extensions: 380223
Number of successful extensions: 1000
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)