Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30527X
(378 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 109 2e-23
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 108 3e-23
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 108 3e-23
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 98 4e-20
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 87 8e-17
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 87 1e-16
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 82 3e-15
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 76 2e-13
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 71 7e-12
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 70 1e-11
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 69 4e-11
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 67 1e-10
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 62 3e-09
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 56 2e-07
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 56 3e-07
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 53 2e-06
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 52 3e-06
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 52 4e-06
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 48 6e-05
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 32 3.1
UniRef50_UPI00006CB830 Cluster: hypothetical protein TTHERM_0057... 31 7.1
UniRef50_Q9PGY0 Cluster: Anhydro-N-acetylmuramic acid kinase; n=... 31 7.1
UniRef50_A5ZC07 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 31 9.4
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 109 bits (262), Expect = 2e-23
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDW
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDW 195
Score = 61.3 bits (142), Expect = 6e-09
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQ
Sbjct: 205 TIQNRQAAISVVPSAASLIIKALKEPPRDRKKQ 237
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 108 bits (260), Expect = 3e-23
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 85
Score = 62.9 bits (146), Expect = 2e-09
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 95 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQ 127
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 108 bits (260), Expect = 3e-23
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 53
Score = 62.9 bits (146), Expect = 2e-09
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQ 95
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 98.3 bits (234), Expect = 4e-20
Identities = 41/53 (77%), Positives = 48/53 (90%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDW 53
Score = 58.0 bits (134), Expect = 5e-08
Identities = 24/33 (72%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+
Sbjct: 87 TIQNRQAAVSVVPSASSLVIKALKEPPRDRKKE 119
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 87.4 bits (207), Expect = 8e-17
Identities = 41/55 (74%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Frame = +3
Query: 90 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DW 251
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DW
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDW 116
Score = 52.4 bits (120), Expect = 3e-06
Identities = 23/32 (71%), Positives = 31/32 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKK 375
TVQNRQA+++VVP+A+AL+I+ALKEP +DRKK
Sbjct: 126 TVQNRQAKVSVVPTASALVIKALKEPFQDRKK 157
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 87.0 bits (206), Expect = 1e-16
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = +3
Query: 90 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DW
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDW 108
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 283 VQNRQAQIAVVPSAAALIIRALKEPPRDRKK 375
V+NR A + V PS A+ +IRALKEPPRDRKK
Sbjct: 119 VKNRVATVIVTPSVASRLIRALKEPPRDRKK 149
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 82.2 bits (194), Expect = 3e-15
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +3
Query: 129 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 146
Score = 62.9 bits (146), Expect = 2e-09
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 156 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQ 188
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 76.2 bits (179), Expect = 2e-13
Identities = 30/53 (56%), Positives = 41/53 (77%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + W
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKW 53
Score = 34.3 bits (75), Expect = 0.76
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 286 QNRQAQIAVVPSAAALIIRALKEPPRDRKK 375
QNR A + V+P+++AL+I+ + RDRKK
Sbjct: 65 QNRNADVTVIPTSSALLIKEIGGYERDRKK 94
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 70.9 bits (166), Expect = 7e-12
Identities = 36/61 (59%), Positives = 41/61 (67%)
Frame = -3
Query: 289 FELFSCHSDLETYQSLVALAMSSPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFG 110
F +F+ L SLVALA+SSPTF GD+P GPI GAK APTSPPT K+ L SFG
Sbjct: 39 FWIFNWTVTLIPLNSLVALAISSPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFG 98
Query: 109 S 107
S
Sbjct: 99 S 99
Score = 33.5 bits (73), Expect = 1.3
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 374 FLRSRGGSLRALMIRAAAEGTTAIWACLF 288
F S GGS +A+M + A+GTT ACLF
Sbjct: 11 FFLSLGGSFKAVMTKEEADGTTEAAACLF 39
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 70.1 bits (164), Expect = 1e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 126 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T W
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSW 74
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 68.5 bits (160), Expect = 4e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +3
Query: 129 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T W
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSW 65
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +1
Query: 268 CDS*TVQNRQAQIAVVPSAAALIIRALKEPPRDRKK 375
C T+QNRQA+I VVP++A+++++ L E PRDRKK
Sbjct: 71 CVKLTIQNRQAKIEVVPTSASMVLKELNEAPRDRKK 106
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 66.9 bits (156), Expect = 1e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 203
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 62.5 bits (145), Expect = 3e-09
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +3
Query: 99 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKK 215
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPKK
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPKK 169
Score = 50.0 bits (114), Expect = 1e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 295 QAQIAVVPSAAALIIRALKEPPRDRKKQ 378
QAQI VVPSA+ALII+ALKEP RDRKKQ
Sbjct: 171 QAQIEVVPSASALIIKALKEPARDRKKQ 198
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 56.0 bits (129), Expect = 2e-07
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGY 53
Score = 33.5 bits (73), Expect = 1.3
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +1
Query: 286 QNRQAQIAVVPSAAALIIRALKEPPR 363
+NRQ ++VVP+A++L+++AL E PR
Sbjct: 65 KNRQPTVSVVPTASSLLVKALGEGPR 90
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 55.6 bits (128), Expect = 3e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = -2
Query: 254 LPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGH 93
LP+T LG+VI HLF RQT+ + GQ GTD P Q+HDF+ + V+L H
Sbjct: 96 LPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDFDLVGVELGWH 149
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 53.2 bits (122), Expect = 2e-06
Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +3
Query: 123 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-SDW 251
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNW 50
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 52.4 bits (120), Expect = 3e-06
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -1
Query: 255 PTSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 154
P+SH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 52.0 bits (119), Expect = 4e-06
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +3
Query: 108 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADY 53
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = +1
Query: 283 VQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
+++R+A + V PS A LII++LKEPPRDRKK+
Sbjct: 64 IKDRKATVEVQPSVATLIIKSLKEPPRDRKKE 95
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 48.0 bits (109), Expect = 6e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = -2
Query: 254 LPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 87
L + GLG++ T+L QT+ T+ Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 127 LEILGGLGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 32.3 bits (70), Expect = 3.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 123 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
++V + GG A L P IGPLG++ +V +I + T D+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDY 46
>UniRef50_UPI00006CB830 Cluster: hypothetical protein
TTHERM_00579290; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00579290 - Tetrahymena
thermophila SB210
Length = 739
Score = 31.1 bits (67), Expect = 7.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 146 DTSQIHDFNFIWVKLRGHFVDYLVQLYTIITLNPNG*VWIPQVYRLNV 3
DTS+I ++K H V Y +LYT++ N + +PQ +LN+
Sbjct: 469 DTSRIQGIKTYYLKNLKHIVQYFQKLYTLVGGFLNSVLLMPQEIQLNL 516
>UniRef50_Q9PGY0 Cluster: Anhydro-N-acetylmuramic acid kinase; n=12;
Gammaproteobacteria|Rep: Anhydro-N-acetylmuramic acid
kinase - Xylella fastidiosa
Length = 381
Score = 31.1 bits (67), Expect = 7.1
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1
Query: 193 LLVCLLKRWVMTLPRPQVTGRSQDHCDS*TVQ 288
LL CLL TLP P+ TGR Q H D T Q
Sbjct: 237 LLACLLADPWFTLPPPKSTGREQFHLDWVTKQ 268
>UniRef50_A5ZC07 Cluster: Putative uncharacterized protein; n=1;
Bacteroides caccae ATCC 43185|Rep: Putative
uncharacterized protein - Bacteroides caccae ATCC 43185
Length = 223
Score = 30.7 bits (66), Expect = 9.4
Identities = 9/19 (47%), Positives = 17/19 (89%)
Frame = -1
Query: 66 YYNNVKSKWMSLDSASLPP 10
YYN+V S W+++D++++PP
Sbjct: 155 YYNSVLSTWLNVDTSTMPP 173
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 30.7 bits (66), Expect = 9.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 123 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
++V + GG+ A L P IGPLG++ +V I T D+
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDY 46
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,826,604
Number of Sequences: 1657284
Number of extensions: 7205328
Number of successful extensions: 17311
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 16972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17309
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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