Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30527X
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.19 
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    21   4.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   7.2  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    20   7.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   9.5  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.4 bits (53), Expect = 0.19
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 190 PILGAKDDVAPTSPPT 143
           PIL  K  V+PT+PPT
Sbjct: 85  PILAEKVSVSPTTPPT 100


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 238 PQVTGRSQDHCDS*TVQN 291
           P++ G++ + CDS  V N
Sbjct: 57  PEIIGKNCERCDSRQVAN 74


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 112 QMKLKS*ICDVSAGKSVPHHLWPLK 186
           Q  ++  +C++S    +P H+W  K
Sbjct: 273 QFNIEMFLCNMSLLTVIPIHVWTSK 297


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 134 IHDFNFIWVKL 102
           ++DF FIW+ L
Sbjct: 491 VNDFGFIWLVL 501


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 303 LGLSVLNCSAVTVILRPTSHLWPWQCHHPP 214
           LG   + C+ + +     +HL  +  HH P
Sbjct: 86  LGEDFVTCNGLKLPKSTITHLHIYDLHHNP 115


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 211 KRWVMTLPRPQVTGRS 258
           K WV +  RP++T +S
Sbjct: 242 KAWVASFGRPKMTPQS 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,811
Number of Sequences: 336
Number of extensions: 1851
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)