Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30527X
(378 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 108 5e-24
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 108 5e-24
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 108 5e-24
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 108 5e-24
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 108 5e-24
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 108 5e-24
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 105 5e-23
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 76 4e-14
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 52 5e-07
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 52 5e-07
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 50 3e-06
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 30 2.9
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 30 2.9
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 30 2.9
BC001845-1|AAH01845.1| 421|Homo sapiens chromosome 7 open readi... 29 5.0
BC000769-1|AAH00769.1| 421|Homo sapiens chromosome 7 open readi... 29 5.0
AK129666-1|BAC85212.1| 125|Homo sapiens protein ( Homo sapiens ... 29 5.0
AK024820-1|BAB15019.1| 421|Homo sapiens protein ( Homo sapiens ... 29 5.0
AK094331-1|BAC04333.1| 129|Homo sapiens protein ( Homo sapiens ... 28 8.8
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 108 bits (260), Expect = 5e-24
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 53
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQ 95
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 108 bits (260), Expect = 5e-24
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 53
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQ 95
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 108 bits (260), Expect = 5e-24
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 53
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQ 95
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 108 bits (260), Expect = 5e-24
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 53
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQ 95
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 108 bits (260), Expect = 5e-24
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 53
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 63 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQ 95
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 108 bits (260), Expect = 5e-24
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 85
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 95 TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQ 127
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 105 bits (252), Expect = 5e-23
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW 251
MPPKFDPNEIK+V LRC GEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDW 53
Score = 57.2 bits (132), Expect = 2e-08
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +1
Query: 280 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQ 378
T++NRQAQI VVPSA+A II+ALK+PPRDRKKQ
Sbjct: 63 TIENRQAQIEVVPSASAPIIKALKKPPRDRKKQ 95
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 75.8 bits (178), Expect = 4e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 93 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 203
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 304 IAVVPSAAALIIRALKEPPRDRKKQ 378
I VVPSA+ALII+ALKEPPRDRKKQ
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQ 62
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 52.4 bits (120), Expect = 5e-07
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -1
Query: 255 PTSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 154
P+SH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 52.4 bits (120), Expect = 5e-07
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -1
Query: 255 PTSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 154
P+SH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1
Query: 255 PTSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 154
P+SH PWQCHH PF TD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 111 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 233
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 206 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 250
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 111 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 233
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 199 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 243
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 111 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 233
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 136 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 180
>BC001845-1|AAH01845.1| 421|Homo sapiens chromosome 7 open reading
frame 25 protein.
Length = 421
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -3
Query: 322 QREQQLSGLVCF----ELFSCHSDLETYQSLVALAMSSPTFLGDRPRGPILGAKDDVAPT 155
++EQ L L F ELF+C S ++ +QS++ + P G+R R +L + +V P
Sbjct: 284 RKEQVLPQLEAFMKDKELFACESAVKDFQSILD-TLGGP---GERERATVLIKRINVVPD 339
Query: 154 SP 149
P
Sbjct: 340 QP 341
>BC000769-1|AAH00769.1| 421|Homo sapiens chromosome 7 open reading
frame 25 protein.
Length = 421
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -3
Query: 322 QREQQLSGLVCF----ELFSCHSDLETYQSLVALAMSSPTFLGDRPRGPILGAKDDVAPT 155
++EQ L L F ELF+C S ++ +QS++ + P G+R R +L + +V P
Sbjct: 284 RKEQVLPQLEAFMKDKELFACESAVKDFQSILD-TLGGP---GERERATVLIKRINVVPD 339
Query: 154 SP 149
P
Sbjct: 340 QP 341
>AK129666-1|BAC85212.1| 125|Homo sapiens protein ( Homo sapiens
cDNA FLJ26155 fis, clone ADG01203. ).
Length = 125
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 181 LKSVLLVCLLKRWVMTLPRPQVTGRSQDHC 270
L S L VC L++ + LPR + +G HC
Sbjct: 61 LPSCLFVCFLRKSLTLLPRQECSGMFSAHC 90
>AK024820-1|BAB15019.1| 421|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21167 fis, clone CAS10861. ).
Length = 421
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -3
Query: 322 QREQQLSGLVCF----ELFSCHSDLETYQSLVALAMSSPTFLGDRPRGPILGAKDDVAPT 155
++EQ L L F ELF+C S ++ +QS++ + P G+R R +L + +V P
Sbjct: 284 RKEQVLPQLEAFMKDKELFACESAVKDFQSILD-TLGGP---GERERATVLIKRINVVPD 339
Query: 154 SP 149
P
Sbjct: 340 QP 341
>AK094331-1|BAC04333.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ37012 fis, clone BRACE2010170. ).
Length = 129
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 193 LLVCLLKRWVMTL-PRPQVTGRSQDHCD 273
+++ L RW + L PRP+ G + DHC+
Sbjct: 14 IVLFLFLRWSLPLSPRPECGGTTSDHCN 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,778,950
Number of Sequences: 237096
Number of extensions: 1124703
Number of successful extensions: 2332
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2332
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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