Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30526
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   3.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   3.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.6  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -1

Query: 619 HFVTTIFYRVALGYFNVLSLLPSLTMIISYLYEGFSFVGS 500
           +F +   YR   G F  L   P+L   I Y + G    GS
Sbjct: 27  YFASWTIYRPDNGKFTALDTDPNLCTHILYAFVGLREDGS 66


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -1

Query: 619 HFVTTIFYRVALGYFNVLSLLPSLTMIISYLYEGFSFVGS 500
           +F +   YR   G F  L   P+L   I Y + G    GS
Sbjct: 27  YFASWTIYRPDNGKFTALDTDPNLCTHILYAFVGLREDGS 66


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 480 IQHGWQSFFFIICRN 436
           +  GWQ+  F++C N
Sbjct: 303 VGEGWQNTDFVVCFN 317


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 619 HFVTTIFYRVALGYFNVLSLLPSLTMIISYLYEG 518
           +F +   YR   G F  L + P+L   + Y + G
Sbjct: 26  YFTSWTIYRPDNGKFTALDVDPTLCTHLLYAFVG 59


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory
          receptor candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 92 FLVSTIRNDSYSIYIRV 42
          FL+STI    + IY+R+
Sbjct: 49 FLLSTILGTCWIIYVRI 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,961
Number of Sequences: 336
Number of extensions: 2512
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)