Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30526
         (643 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012531-1|AAH12531.1|  324|Homo sapiens asparagine-linked glyco...    49   1e-05
AL138706-7|CAI14011.1|  324|Homo sapiens asparagine-linked glyco...    49   1e-05
AF183413-1|AAG09682.1|  324|Homo sapiens dolichyl-phosphate beta...    49   1e-05
AF102850-1|AAD41465.1|  324|Homo sapiens dolichyl-phosphate beta...    49   1e-05

>BC012531-1|AAH12531.1|  324|Homo sapiens asparagine-linked
           glycosylation 5 homolog (S. cerevisiae,
           dolichyl-phosphate be protein.
          Length = 324

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 36/64 (56%)
 Frame = +1

Query: 325 PVVERYKDEETYNDYLTNTKLRFPSIXXXXXXXXXXXXPAYNEEKRLPPMLDETIEFLEN 504
           P + R+++E+ + +     K   PSI            P+YNEEKRLP M+DE + +LE 
Sbjct: 35  PALHRHEEEKFFLN-AKGQKETLPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALSYLEK 93

Query: 505 RQKK 516
           RQK+
Sbjct: 94  RQKR 97



 Score = 35.1 bits (77), Expect = 0.21
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +3

Query: 510 KENPSYKYEIIIVSDGSKDSTLK 578
           K +P++ YE+I+V DGSKD T K
Sbjct: 96  KRDPAFTYEVIVVDDGSKDQTSK 118



 Score = 32.7 bits (71), Expect = 1.1
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +2

Query: 566 QHVKVAESYSIKYGSDKVKCLELIKN 643
           Q  KVA  Y  KYGSDKV+ + L+KN
Sbjct: 115 QTSKVAFKYCQKYGSDKVRVITLVKN 140


>AL138706-7|CAI14011.1|  324|Homo sapiens asparagine-linked
           glycosylation 5 homolog (S. cerevisiae,
           dolichyl-phosphate be protein.
          Length = 324

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 36/64 (56%)
 Frame = +1

Query: 325 PVVERYKDEETYNDYLTNTKLRFPSIXXXXXXXXXXXXPAYNEEKRLPPMLDETIEFLEN 504
           P + R+++E+ + +     K   PSI            P+YNEEKRLP M+DE + +LE 
Sbjct: 35  PALHRHEEEKFFLN-AKGQKETLPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALSYLEK 93

Query: 505 RQKK 516
           RQK+
Sbjct: 94  RQKR 97



 Score = 35.1 bits (77), Expect = 0.21
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +3

Query: 510 KENPSYKYEIIIVSDGSKDSTLK 578
           K +P++ YE+I+V DGSKD T K
Sbjct: 96  KRDPAFTYEVIVVDDGSKDQTSK 118



 Score = 32.7 bits (71), Expect = 1.1
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +2

Query: 566 QHVKVAESYSIKYGSDKVKCLELIKN 643
           Q  KVA  Y  KYGSDKV+ + L+KN
Sbjct: 115 QTSKVAFKYCQKYGSDKVRVITLVKN 140


>AF183413-1|AAG09682.1|  324|Homo sapiens dolichyl-phosphate
           beta-glucosyltransferase protein.
          Length = 324

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 36/64 (56%)
 Frame = +1

Query: 325 PVVERYKDEETYNDYLTNTKLRFPSIXXXXXXXXXXXXPAYNEEKRLPPMLDETIEFLEN 504
           P + R+++E+ + +     K   PSI            P+YNEEKRLP M+DE + +LE 
Sbjct: 35  PALHRHEEEKFFLN-AKGQKETLPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALSYLEK 93

Query: 505 RQKK 516
           RQK+
Sbjct: 94  RQKR 97



 Score = 35.1 bits (77), Expect = 0.21
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +3

Query: 510 KENPSYKYEIIIVSDGSKDSTLK 578
           K +P++ YE+I+V DGSKD T K
Sbjct: 96  KRDPAFTYEVIVVDDGSKDQTSK 118



 Score = 32.7 bits (71), Expect = 1.1
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +2

Query: 566 QHVKVAESYSIKYGSDKVKCLELIKN 643
           Q  KVA  Y  KYGSDKV+ + L+KN
Sbjct: 115 QTSKVAFKYCQKYGSDKVRVITLVKN 140


>AF102850-1|AAD41465.1|  324|Homo sapiens dolichyl-phosphate
           beta-glucosyltransferase protein.
          Length = 324

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 36/64 (56%)
 Frame = +1

Query: 325 PVVERYKDEETYNDYLTNTKLRFPSIXXXXXXXXXXXXPAYNEEKRLPPMLDETIEFLEN 504
           P + R+++E+ + +     K   PSI            P+YNEEKRLP M+DE + +LE 
Sbjct: 35  PALHRHEEEKFFLN-AKGQKETLPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALSYLEK 93

Query: 505 RQKK 516
           RQK+
Sbjct: 94  RQKR 97



 Score = 35.1 bits (77), Expect = 0.21
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +3

Query: 510 KENPSYKYEIIIVSDGSKDSTLK 578
           K +P++ YE+I+V DGSKD T K
Sbjct: 96  KRDPAFTYEVIVVDDGSKDQTSK 118



 Score = 32.7 bits (71), Expect = 1.1
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +2

Query: 566 QHVKVAESYSIKYGSDKVKCLELIKN 643
           Q  KVA  Y  KYGSDKV+ + L+KN
Sbjct: 115 QTSKVAFKYCQKYGSDKVRVITLVKN 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,597,458
Number of Sequences: 237096
Number of extensions: 1294401
Number of successful extensions: 1773
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1769
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)