Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30526
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094692-1|AAM11045.1|  326|Drosophila melanogaster GH09240p pro...    63   3e-10
AE014134-1452|AAF52633.1|  326|Drosophila melanogaster CG7870-PA...    63   3e-10

>AY094692-1|AAM11045.1|  326|Drosophila melanogaster GH09240p
           protein.
          Length = 326

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 31/69 (44%), Positives = 40/69 (57%)
 Frame = +1

Query: 313 TDTYPVVERYKDEETYNDYLTNTKLRFPSIXXXXXXXXXXXXPAYNEEKRLPPMLDETIE 492
           T  YP ++R+KDEET+ D  T   + FPS+            PAYNEE+RLP MLDE + 
Sbjct: 31  TKPYPNIKRHKDEETFLDPHTIKTVTFPSLEDSPSLELSVIVPAYNEEQRLPSMLDECLA 90

Query: 493 FLENRQKKT 519
           FLE +   T
Sbjct: 91  FLEQKSAGT 99



 Score = 32.7 bits (71), Expect = 0.43
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = +3

Query: 495 LGEPTKENPSYKYEIIIVSDGSKDSTL 575
           L + +   P++ YE+I+VSDGS+D+T+
Sbjct: 92  LEQKSAGTPNFTYEVIVVSDGSQDATV 118



 Score = 31.1 bits (67), Expect = 1.3
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +2

Query: 572 VKVAESYSIKYGSDKVKCLELIKN 643
           V VA  YS K+G++KV+ LELI+N
Sbjct: 118 VSVALGYSKKHGAEKVRVLELIEN 141


>AE014134-1452|AAF52633.1|  326|Drosophila melanogaster CG7870-PA
           protein.
          Length = 326

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 31/69 (44%), Positives = 40/69 (57%)
 Frame = +1

Query: 313 TDTYPVVERYKDEETYNDYLTNTKLRFPSIXXXXXXXXXXXXPAYNEEKRLPPMLDETIE 492
           T  YP ++R+KDEET+ D  T   + FPS+            PAYNEE+RLP MLDE + 
Sbjct: 31  TKPYPNIKRHKDEETFLDPHTIKTVTFPSLEDSPSLELSVIVPAYNEEQRLPSMLDECLA 90

Query: 493 FLENRQKKT 519
           FLE +   T
Sbjct: 91  FLEQKSAGT 99



 Score = 32.7 bits (71), Expect = 0.43
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = +3

Query: 495 LGEPTKENPSYKYEIIIVSDGSKDSTL 575
           L + +   P++ YE+I+VSDGS+D+T+
Sbjct: 92  LEQKSAGTPNFTYEVIVVSDGSQDATV 118



 Score = 31.1 bits (67), Expect = 1.3
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +2

Query: 572 VKVAESYSIKYGSDKVKCLELIKN 643
           V VA  YS K+G++KV+ LELI+N
Sbjct: 118 VSVALGYSKKHGAEKVRVLELIEN 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,585,354
Number of Sequences: 53049
Number of extensions: 381088
Number of successful extensions: 582
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)