Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30526
         (643 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g39630.2 68415.m04859 glycosyl transferase family 2 protein s...    37   0.013
At2g39630.1 68415.m04858 glycosyl transferase family 2 protein s...    37   0.013
At5g53520.1 68418.m06651 oligopeptide transporter OPT family pro...    27   8.0  

>At2g39630.2 68415.m04859 glycosyl transferase family 2 protein
           similar to dolichyl-phosphate beta-glucosyltransferase
           from Saccharomyces cerevisiae [SP|P40350]; contains Pfam
           glycosyltransferase group 2 domain PF00535
          Length = 236

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = +1

Query: 439 PAYNEEKRLPPMLDETIEFLENRQKK 516
           PAYNEE RLP  L+ET+++L++R  +
Sbjct: 73  PAYNEELRLPAALEETMDYLQDRASR 98


>At2g39630.1 68415.m04858 glycosyl transferase family 2 protein
           similar to dolichyl-phosphate beta-glucosyltransferase
           from Saccharomyces cerevisiae [SP|P40350]; contains Pfam
           glycosyltransferase group 2 domain PF00535
          Length = 336

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = +1

Query: 439 PAYNEEKRLPPMLDETIEFLENRQKK 516
           PAYNEE RLP  L+ET+++L++R  +
Sbjct: 73  PAYNEELRLPAALEETMDYLQDRASR 98


>At5g53520.1 68418.m06651 oligopeptide transporter OPT family
           protein similar to SP|P40900 Sexual differentiation
           process protein isp4 {Schizosaccharomyces pombe},
           oligopeptide transporter Opt1p [Candida albicans]
           GI:2367386; contains Pfam profile PF03169: OPT
           oligopeptide transporter protein
          Length = 733

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 616 FVTTIFYRVALGYFNVLSLLPSLTMIISYLYEGFSFVGSPRTQLFHP 476
           + T I   V L Y   L  LP+L ++I+    GF + G  R  L  P
Sbjct: 129 YATHILSAVKLYYKRRLDFLPALLVMITTQVLGFGWAGLYRKHLVEP 175


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,107,738
Number of Sequences: 28952
Number of extensions: 188658
Number of successful extensions: 342
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)