Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30521
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    70   1e-13
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   9.1  

>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 69.7 bits (163), Expect = 1e-13
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = +3

Query: 75  GKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKT 239
           GKKYKM  SE FD++M  +GVG++ RK  N+++PTVEL K+GDEY   T S  +T
Sbjct: 35  GKKYKMEKSEGFDDYMLALGVGMVLRKLGNSISPTVELVKNGDEYTFNTLSPSRT 89



 Score = 31.5 bits (68), Expect = 0.034
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +2

Query: 266 EF*DVRSDGAKVKSVCTFEGNTL 334
           EF +   DG  VKSVCTF+GN L
Sbjct: 99  EFDEETVDGRMVKSVCTFDGNKL 121


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 358 VGGHLNLLECIAFECAYGFHLSTVRADILELFAGL 254
           V G  +   C    CAYG H S    +++ +F  L
Sbjct: 466 VNGTWDFSACEETSCAYGLHNSFQVMELVSVFGPL 500


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,038
Number of Sequences: 2352
Number of extensions: 9928
Number of successful extensions: 59
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)