Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30521
         (865 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p pro...    96   6e-20
BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p pro...    94   3e-19
BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p pro...    94   3e-19
AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB...    94   3e-19
AE014297-1318|AAN13511.1|  157|Drosophila melanogaster CG6783-PC...    91   2e-18
BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p pro...    58   2e-08
BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p pro...    58   2e-08
AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA...    58   2e-08

>BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p
           protein.
          Length = 142

 Score = 95.9 bits (228), Expect = 6e-20
 Identities = 53/134 (39%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
 Frame = +3

Query: 60  KMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKT 239
           KM FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT
Sbjct: 12  KMSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKT 71

Query: 240 TDMKFS---PAKSSKMSALTVLR*NPYAHSKAIHSSKFRWPPTVLKSLTXXXFGPEEMXA 410
           + + F          +    V        +K     K   P T+++  T       E+  
Sbjct: 72  SAISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT-----DNELIT 126

Query: 411 VMXAXXVXCXRVYK 452
            +    V C RVYK
Sbjct: 127 TLTIGNVKCVRVYK 140


>BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p
           protein.
          Length = 130

 Score = 93.9 bits (223), Expect = 3e-19
 Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
 Frame = +3

Query: 63  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTT 242
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 243 DMKFS---PAKSSKMSALTVLR*NPYAHSKAIHSSKFRWPPTVLKSLTXXXFGPEEMXAV 413
            + F          +    V        +K     K   P T+++  T       E+   
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT-----DNELITT 115

Query: 414 MXAXXVXCXRVYK 452
           +    V C RVYK
Sbjct: 116 LTIGNVKCVRVYK 128


>BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p
           protein.
          Length = 130

 Score = 93.9 bits (223), Expect = 3e-19
 Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
 Frame = +3

Query: 63  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTT 242
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 243 DMKFS---PAKSSKMSALTVLR*NPYAHSKAIHSSKFRWPPTVLKSLTXXXFGPEEMXAV 413
            + F          +    V        +K     K   P T+++  T       E+   
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT-----DNELITT 115

Query: 414 MXAXXVXCXRVYK 452
           +    V C RVYK
Sbjct: 116 LTIGNVKCVRVYK 128


>AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB,
           isoform B protein.
          Length = 130

 Score = 93.9 bits (223), Expect = 3e-19
 Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
 Frame = +3

Query: 63  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTT 242
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 243 DMKFS---PAKSSKMSALTVLR*NPYAHSKAIHSSKFRWPPTVLKSLTXXXFGPEEMXAV 413
            + F          +    V        +K     K   P T+++  T       E+   
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT-----DNELITT 115

Query: 414 MXAXXVXCXRVYK 452
           +    V C RVYK
Sbjct: 116 LTIGNVKCVRVYK 128


>AE014297-1318|AAN13511.1|  157|Drosophila melanogaster CG6783-PC,
           isoform C protein.
          Length = 157

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 39/64 (60%), Positives = 51/64 (79%)
 Frame = +3

Query: 63  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTT 242
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 243 DMKF 254
            + F
Sbjct: 61  AISF 64



 Score = 29.5 bits (63), Expect = 6.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 260 GEEF*DVRSDGAKVKSVCTFEGNTLKQVQ 346
           G EF +   DG  VKS+ T +GN L Q Q
Sbjct: 67  GVEFDEETLDGRNVKSIITLDGNKLTQEQ 95


>BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p
           protein.
          Length = 117

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
 Frame = +3

Query: 126 TIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTDMKFS---PAKSSKMSALTVL 296
           + GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+ + F          +    V 
Sbjct: 9   SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68

Query: 297 R*NPYAHSKAIHSSKFRWPPTVLKSLTXXXFGPEEMXAVMXAXXVXCXRVYK 452
                  +K     K   P T+++  T       E+   +    V C RVYK
Sbjct: 69  SIITLDGNKLTQEQKGDKPTTIVREFT-----DNELITTLTIGNVKCVRVYK 115


>BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p
           protein.
          Length = 117

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
 Frame = +3

Query: 126 TIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTDMKFS---PAKSSKMSALTVL 296
           + GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+ + F          +    V 
Sbjct: 9   SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68

Query: 297 R*NPYAHSKAIHSSKFRWPPTVLKSLTXXXFGPEEMXAVMXAXXVXCXRVYK 452
                  +K     K   P T+++  T       E+   +    V C RVYK
Sbjct: 69  SIITLDGNKLTQEQKGDKPTTIVREFT-----DNELITTLTIGNVKCVRVYK 115


>AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA,
           isoform A protein.
          Length = 117

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
 Frame = +3

Query: 126 TIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTDMKFS---PAKSSKMSALTVL 296
           + GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+ + F          +    V 
Sbjct: 9   SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68

Query: 297 R*NPYAHSKAIHSSKFRWPPTVLKSLTXXXFGPEEMXAVMXAXXVXCXRVYK 452
                  +K     K   P T+++  T       E+   +    V C RVYK
Sbjct: 69  SIITLDGNKLTQEQKGDKPTTIVREFT-----DNELITTLTIGNVKCVRVYK 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,952,166
Number of Sequences: 53049
Number of extensions: 427378
Number of successful extensions: 1000
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)