Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30521
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81127-2|CAB03387.1|  137|Caenorhabditis elegans Hypothetical pr...    72   5e-13
AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding...    70   2e-12
Z81127-7|CAB03391.2|  137|Caenorhabditis elegans Hypothetical pr...    69   6e-12
AF003141-5|AAK21486.1|  136|Caenorhabditis elegans Lipid binding...    65   7e-11
AC024771-9|ABA61863.1|  137|Caenorhabditis elegans Lipid binding...    58   8e-09
AC024771-8|AAK70656.1|  152|Caenorhabditis elegans Lipid binding...    58   8e-09
U64855-7|AAB04984.1|  145|Caenorhabditis elegans Lipid binding p...    36   0.028
U40420-6|ABD63223.1|  150|Caenorhabditis elegans Lipid binding p...    31   0.80 
U40420-5|AAA81433.2|  165|Caenorhabditis elegans Lipid binding p...    31   0.80 
U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL021481-1|CAA16333.1|  363|Caenorhabditis elegans Hypothetical ...    31   1.4  
U40420-8|AAA81435.1|  161|Caenorhabditis elegans Lipid binding p...    29   5.7  
U40420-7|AAA81434.1|  159|Caenorhabditis elegans Lipid binding p...    29   5.7  

>Z81127-2|CAB03387.1|  137|Caenorhabditis elegans Hypothetical
           protein T22G5.2 protein.
          Length = 137

 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 33/63 (52%), Positives = 46/63 (73%)
 Frame = +3

Query: 66  EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTD 245
           +F+G+ +K+  +ENFDE+MK IGVGLITRKAA  + P +E+R DG+ +N    STFK T 
Sbjct: 6   DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64

Query: 246 MKF 254
           + F
Sbjct: 65  LSF 67


>AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding
           protein protein 6 protein.
          Length = 135

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 33/66 (50%), Positives = 47/66 (71%)
 Frame = +3

Query: 57  IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFK 236
           +  EFVG+ +K+  SENF+E+MK +GVGLITRKAA  + PT+E++ +GD +     STFK
Sbjct: 1   MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59

Query: 237 TTDMKF 254
            T + F
Sbjct: 60  NTTLSF 65


>Z81127-7|CAB03391.2|  137|Caenorhabditis elegans Hypothetical
           protein T22G5.6 protein.
          Length = 137

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 30/63 (47%), Positives = 46/63 (73%)
 Frame = +3

Query: 66  EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTD 245
           EF+G+ +K+  SENF+E++K IGVGL+ RKAA+  +PT+E++ DGD ++    STFK   
Sbjct: 6   EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64

Query: 246 MKF 254
           + F
Sbjct: 65  LAF 67


>AF003141-5|AAK21486.1|  136|Caenorhabditis elegans Lipid binding
           protein protein 5 protein.
          Length = 136

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 27/64 (42%), Positives = 49/64 (76%)
 Frame = +3

Query: 66  EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTD 245
           +FVG+ +K+  SENF++++K +GVGL+ RKAA    PT+E++ +G+++++   STFK T 
Sbjct: 5   QFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTT 63

Query: 246 MKFS 257
           ++F+
Sbjct: 64  LEFT 67


>AC024771-9|ABA61863.1|  137|Caenorhabditis elegans Lipid binding
           protein protein 9,isoform b protein.
          Length = 137

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 28/72 (38%), Positives = 43/72 (59%)
 Frame = +3

Query: 57  IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFK 236
           I+ + VGK +   SSENFDE++K +GVG   R  A    P +E   +GDE+ + ++STFK
Sbjct: 3   IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 61

Query: 237 TTDMKFSPAKSS 272
              +K+    +S
Sbjct: 62  NYTLKWKLGTAS 73


>AC024771-8|AAK70656.1|  152|Caenorhabditis elegans Lipid binding
           protein protein 9,isoform a protein.
          Length = 152

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 28/72 (38%), Positives = 43/72 (59%)
 Frame = +3

Query: 57  IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFK 236
           I+ + VGK +   SSENFDE++K +GVG   R  A    P +E   +GDE+ + ++STFK
Sbjct: 18  IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 76

Query: 237 TTDMKFSPAKSS 272
              +K+    +S
Sbjct: 77  NYTLKWKLGTAS 88


>U64855-7|AAB04984.1|  145|Caenorhabditis elegans Lipid binding
           protein protein 4 protein.
          Length = 145

 Score = 36.3 bits (80), Expect = 0.028
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 54  SIKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANT--VTPTVELRKDGDEYNLVTSS 227
           S+  +F G+ Y++  SENFDEF+ + GV    R+      +T  +   ++  +YN+   +
Sbjct: 2   SVPDKFFGR-YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLT 60

Query: 228 TFKTTD 245
           + K T+
Sbjct: 61  SKKNTN 66


>U40420-6|ABD63223.1|  150|Caenorhabditis elegans Lipid binding
           protein protein 3,isoform b protein.
          Length = 150

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 57  IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKD--GDEYNLVTSST 230
           I  +F GK Y +  SENFDEF+   GV    R+       +  L K+    +YN+   ++
Sbjct: 8   IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 66

Query: 231 FKTT 242
            K T
Sbjct: 67  KKNT 70


>U40420-5|AAA81433.2|  165|Caenorhabditis elegans Lipid binding
           protein protein 3,isoform a protein.
          Length = 165

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 57  IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANTVTPTVELRKD--GDEYNLVTSST 230
           I  +F GK Y +  SENFDEF+   GV    R+       +  L K+    +YN+   ++
Sbjct: 23  IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 81

Query: 231 FKTT 242
            K T
Sbjct: 82  KKNT 85


>U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical
           protein F08F8.9c protein.
          Length = 517

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 96  SSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTDMKFSPAKSSK 275
           SSE  ++ +  IGV L  RK  +   P      DG+    V +ST K  + K  P K  K
Sbjct: 2   SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPK 61


>U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical
           protein F08F8.9a protein.
          Length = 626

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 96  SSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTDMKFSPAKSSK 275
           SSE  ++ +  IGV L  RK  +   P      DG+    V +ST K  + K  P K  K
Sbjct: 2   SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPK 61


>U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical
           protein F08F8.9b protein.
          Length = 624

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 96  SSENFDEFMKTIGVGLITRKAANTVTPTVELRKDGDEYNLVTSSTFKTTDMKFSPAKSSK 275
           SSE  ++ +  IGV L  RK  +   P      DG+    V +ST K  + K  P K  K
Sbjct: 2   SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPK 61


>AL021481-1|CAA16333.1|  363|Caenorhabditis elegans Hypothetical
           protein Y43F4B.4 protein.
          Length = 363

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -1

Query: 376 VSDFKTVGGHLNLLECIAFECAYGFHLSTVRADI 275
           V  F+TVG H +L+ C++F+  +G  ++T  +D+
Sbjct: 7   VKPFQTVGAHRDLIHCVSFD-PHGRRMATCASDM 39


>U40420-8|AAA81435.1|  161|Caenorhabditis elegans Lipid binding
           protein protein 2 protein.
          Length = 161

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 84  YKMTSSENFDEFMKTIGVGLITRKAANTVT 173
           + +  SENFDE++   G G  TRK     T
Sbjct: 30  FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 59


>U40420-7|AAA81434.1|  159|Caenorhabditis elegans Lipid binding
           protein protein 1 protein.
          Length = 159

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 84  YKMTSSENFDEFMKTIGVGLITRKAANTVT 173
           + +  SENFDE++   G G  TRK     T
Sbjct: 28  FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,069,077
Number of Sequences: 27780
Number of extensions: 213823
Number of successful extensions: 488
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)