Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30520
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011952-1|AAH11952.1| 276|Homo sapiens family with sequence si... 76 9e-14
BC008430-1|AAH08430.1| 205|Homo sapiens family with sequence si... 76 9e-14
AF223467-1|AAF64142.1| 205|Homo sapiens NPD008 protein protein. 76 9e-14
AF151906-1|AAD34143.1| 181|Homo sapiens CGI-148 protein protein. 76 9e-14
AB074181-1|BAE45741.1| 164|Homo sapiens putative protein produc... 75 3e-13
D82344-1|BAA11555.1| 314|Homo sapiens NBPhox protein. 31 3.5
BC017199-1|AAH17199.1| 314|Homo sapiens paired-like homeobox 2b... 31 3.5
AF117979-1|AAD26698.1| 314|Homo sapiens homeodomain transcripti... 31 3.5
AB015671-1|BAA82670.1| 314|Homo sapiens NBPhox protein. 31 3.5
BC129941-1|AAI29942.1| 232|Homo sapiens LHFPL3 protein protein. 31 4.7
BC129938-1|AAI29939.1| 232|Homo sapiens LHFPL3 protein protein. 31 4.7
BC129937-1|AAI29938.1| 236|Homo sapiens lipoma HMGIC fusion par... 31 4.7
AY260763-1|AAP14954.1| 236|Homo sapiens lipoma HMGIC fusion-par... 31 4.7
>BC011952-1|AAH11952.1| 276|Homo sapiens family with sequence
similarity 18, member B2 protein.
Length = 276
Score = 76.2 bits (179), Expect = 9e-14
Identities = 31/57 (54%), Positives = 44/57 (77%), Gaps = 6/57 (10%)
Frame = +3
Query: 495 CRLLDVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQ------SRVNKHESRLFWMG 647
C VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ V++ ESR+FW+G
Sbjct: 74 CDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Score = 53.2 bits (122), Expect = 8e-07
Identities = 33/71 (46%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Frame = +1
Query: 319 DDDTIAFG----EEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFV 474
+DDT A EE+ N+ + HP FFHL FR SAIIV +LC S SFI V
Sbjct: 7 NDDTEAVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSSFITCMV 66
Query: 475 LGIRQLSADFW 507
I LS DFW
Sbjct: 67 TIILLLSCDFW 77
>BC008430-1|AAH08430.1| 205|Homo sapiens family with sequence
similarity 18, member B protein.
Length = 205
Score = 76.2 bits (179), Expect = 9e-14
Identities = 31/57 (54%), Positives = 44/57 (77%), Gaps = 6/57 (10%)
Frame = +3
Query: 495 CRLLDVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQ------SRVNKHESRLFWMG 647
C VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ V++ ESR+FW+G
Sbjct: 74 CDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Score = 60.9 bits (141), Expect = 4e-09
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +1
Query: 319 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLGIR 486
+D ++ EE+ N+ + HP FFHL FR SAIIVY+LCG S SFI V I
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCGLLSSSFITCMVTIIL 70
Query: 487 QLSADFW 507
LS DFW
Sbjct: 71 LLSCDFW 77
>AF223467-1|AAF64142.1| 205|Homo sapiens NPD008 protein protein.
Length = 205
Score = 76.2 bits (179), Expect = 9e-14
Identities = 31/57 (54%), Positives = 44/57 (77%), Gaps = 6/57 (10%)
Frame = +3
Query: 495 CRLLDVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQ------SRVNKHESRLFWMG 647
C VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ V++ ESR+FW+G
Sbjct: 74 CDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Score = 57.6 bits (133), Expect = 4e-08
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +1
Query: 319 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLGIR 486
+D ++ EE+ N+ + HP FFHL FR SAIIVY+LC S SFI V I
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIIL 70
Query: 487 QLSADFW 507
LS DFW
Sbjct: 71 LLSCDFW 77
>AF151906-1|AAD34143.1| 181|Homo sapiens CGI-148 protein protein.
Length = 181
Score = 76.2 bits (179), Expect = 9e-14
Identities = 31/57 (54%), Positives = 44/57 (77%), Gaps = 6/57 (10%)
Frame = +3
Query: 495 CRLLDVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQ------SRVNKHESRLFWMG 647
C VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ V++ ESR+FW+G
Sbjct: 74 CDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Score = 57.6 bits (133), Expect = 4e-08
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +1
Query: 319 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLGIR 486
+D ++ EE+ N+ + HP FFHL FR SAIIVY+LC S SFI V I
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIIL 70
Query: 487 QLSADFW 507
LS DFW
Sbjct: 71 LLSCDFW 77
>AB074181-1|BAE45741.1| 164|Homo sapiens putative protein product
of Nbla10383 protein.
Length = 164
Score = 74.5 bits (175), Expect = 3e-13
Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 6/57 (10%)
Frame = +3
Query: 495 CRLLDVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQ------SRVNKHESRLFWMG 647
C VKN++GRL+VGLRWWN++D++GK HWVFE+R+ V++ ESR+FW+G
Sbjct: 74 CDFWAVKNVTGRLMVGLRWWNHIDEDGKGHWVFESRKESSQENKTVSEAESRIFWLG 130
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 319 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLGIR 486
+D ++ EE+ N+ + HP FFHL FR SAIIV +LC S SFI V I
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSSFITCMVTIIL 70
Query: 487 QLSADFW 507
LS DFW
Sbjct: 71 LLSCDFW 77
>D82344-1|BAA11555.1| 314|Homo sapiens NBPhox protein.
Length = 314
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 431 SCVGGSPTHSLQASY*AFDSCLQTSGCQ 514
SC+ G T SL ++Y F SC Q SG Q
Sbjct: 16 SCMAGMDTSSLASAYADFSSCSQASGFQ 43
>BC017199-1|AAH17199.1| 314|Homo sapiens paired-like homeobox 2b
protein.
Length = 314
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 431 SCVGGSPTHSLQASY*AFDSCLQTSGCQ 514
SC+ G T SL ++Y F SC Q SG Q
Sbjct: 16 SCMAGMDTSSLASAYADFSSCSQASGFQ 43
>AF117979-1|AAD26698.1| 314|Homo sapiens homeodomain transcription
factor NBPHOX protein.
Length = 314
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 431 SCVGGSPTHSLQASY*AFDSCLQTSGCQ 514
SC+ G T SL ++Y F SC Q SG Q
Sbjct: 16 SCMAGMDTSSLASAYADFSSCSQASGFQ 43
>AB015671-1|BAA82670.1| 314|Homo sapiens NBPhox protein.
Length = 314
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 431 SCVGGSPTHSLQASY*AFDSCLQTSGCQ 514
SC+ G T SL ++Y F SC Q SG Q
Sbjct: 16 SCMAGMDTSSLASAYADFSSCSQASGFQ 43
>BC129941-1|AAI29942.1| 232|Homo sapiens LHFPL3 protein protein.
Length = 232
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 382 IVFFHLVFRCSAIIVYILCGWFSDSFIASFVLGIRQLSADFWMS 513
I+ F L F C+ VY +C W + A VLG + D W S
Sbjct: 123 IICFTLFFFCNTATVYKICAWMQLTSAACLVLGC-MIFPDGWDS 165
>BC129938-1|AAI29939.1| 232|Homo sapiens LHFPL3 protein protein.
Length = 232
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 382 IVFFHLVFRCSAIIVYILCGWFSDSFIASFVLGIRQLSADFWMS 513
I+ F L F C+ VY +C W + A VLG + D W S
Sbjct: 123 IICFTLFFFCNTATVYKICAWMQLTSAACLVLGC-MIFPDGWDS 165
>BC129937-1|AAI29938.1| 236|Homo sapiens lipoma HMGIC fusion
partner-like 3 protein.
Length = 236
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 382 IVFFHLVFRCSAIIVYILCGWFSDSFIASFVLGIRQLSADFWMS 513
I+ F L F C+ VY +C W + A VLG + D W S
Sbjct: 123 IICFTLFFFCNTATVYKICAWMQLTSAACLVLGC-MIFPDGWDS 165
>AY260763-1|AAP14954.1| 236|Homo sapiens lipoma HMGIC
fusion-partner-like protein protein.
Length = 236
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 382 IVFFHLVFRCSAIIVYILCGWFSDSFIASFVLGIRQLSADFWMS 513
I+ F L F C+ VY +C W + A VLG + D W S
Sbjct: 123 IICFTLFFFCNTATVYKICAWMQLTSAACLVLGC-MIFPDGWDS 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,978,215
Number of Sequences: 237096
Number of extensions: 2042928
Number of successful extensions: 3943
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3938
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -