Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30520
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB...   106   2e-23
AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p pro...   100   1e-21
AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA...   100   1e-21

>AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB,
           isoform B protein.
          Length = 215

 Score =  106 bits (255), Expect = 2e-23
 Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 6/78 (7%)
 Frame = +1

Query: 292 MNSATVPLLDDDTIAFGEEDN------ANKQFVHPYIVFFHLVFRCSAIIVYILCGWFSD 453
           M SATVPLLDDDTI FGEED       A +++ HPY+ FFHL FR +AI++Y+ CGWFSD
Sbjct: 1   MASATVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGWFSD 60

Query: 454 SFIASFVLGIRQLSADFW 507
           SFI SFV  +  LSADFW
Sbjct: 61  SFITSFVFVVLFLSADFW 78



 Score = 92.7 bits (220), Expect = 4e-19
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = +3

Query: 510 VKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNKHESRLFWMG 647
           VKNISGRLLVGLRWWNYVDD+G SHWVFE++ SRVNK+E R+FW+G
Sbjct: 80  VKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSRVNKNEQRIFWLG 125


>AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p
           protein.
          Length = 223

 Score =  100 bits (240), Expect = 1e-21
 Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 9/81 (11%)
 Frame = +1

Query: 292 MNSATV---PLLDDDTIAFGEEDN------ANKQFVHPYIVFFHLVFRCSAIIVYILCGW 444
           M SATV   PLLDDDTI FGEED       A +++ HPY+ FFHL FR +AI++Y+ CGW
Sbjct: 1   MASATVRNVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGW 60

Query: 445 FSDSFIASFVLGIRQLSADFW 507
           FSDSFI SFV  +  LSADFW
Sbjct: 61  FSDSFITSFVFVVLFLSADFW 81



 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 38/51 (74%), Positives = 44/51 (86%), Gaps = 5/51 (9%)
 Frame = +3

Query: 510 VKNISGRLLVGLRWWNYVDDNGKSHWVFEAR-----QSRVNKHESRLFWMG 647
           VKNISGRLLVGLRWWNYVDD+G SHWVFE++     QSRVNK+E R+FW+G
Sbjct: 83  VKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSESYQSRVNKNEQRIFWLG 133


>AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA,
           isoform A protein.
          Length = 218

 Score =  100 bits (240), Expect = 1e-21
 Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 9/81 (11%)
 Frame = +1

Query: 292 MNSATV---PLLDDDTIAFGEEDN------ANKQFVHPYIVFFHLVFRCSAIIVYILCGW 444
           M SATV   PLLDDDTI FGEED       A +++ HPY+ FFHL FR +AI++Y+ CGW
Sbjct: 1   MASATVRNVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGW 60

Query: 445 FSDSFIASFVLGIRQLSADFW 507
           FSDSFI SFV  +  LSADFW
Sbjct: 61  FSDSFITSFVFVVLFLSADFW 81



 Score = 92.7 bits (220), Expect = 4e-19
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = +3

Query: 510 VKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNKHESRLFWMG 647
           VKNISGRLLVGLRWWNYVDD+G SHWVFE++ SRVNK+E R+FW+G
Sbjct: 83  VKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSRVNKNEQRIFWLG 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,135,807
Number of Sequences: 53049
Number of extensions: 616265
Number of successful extensions: 1323
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)