Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30517
(659 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 131 2e-29
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 127 2e-28
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 127 2e-28
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 127 3e-28
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 126 6e-28
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 125 8e-28
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 125 1e-27
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 124 1e-27
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 116 4e-25
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 116 7e-25
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 114 2e-24
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 113 3e-24
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 113 4e-24
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 112 8e-24
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 110 3e-23
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 109 4e-23
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 108 1e-22
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 99 5e-20
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 99 5e-20
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 99 8e-20
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 99 8e-20
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 95 1e-18
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 94 2e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 93 5e-18
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 91 2e-17
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 91 2e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 89 7e-17
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 86 6e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 84 3e-15
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 83 4e-15
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 83 6e-15
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 83 8e-15
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 82 1e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 82 1e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 81 3e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 79 9e-14
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 79 1e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 79 1e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 77 5e-13
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 76 7e-13
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 76 7e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 76 9e-13
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 75 2e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 75 2e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 74 3e-12
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 74 4e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 73 5e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 73 8e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 73 8e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 71 2e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 71 2e-11
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 71 3e-11
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 71 3e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 70 6e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 70 6e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 70 6e-11
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 68 2e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 68 2e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 67 4e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 66 5e-10
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 66 5e-10
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 66 7e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 66 9e-10
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 65 1e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 1e-09
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 65 2e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 65 2e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 2e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 64 3e-09
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 63 5e-09
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 63 5e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 63 7e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 62 9e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 62 1e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 61 3e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 4e-08
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 60 5e-08
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 60 6e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 1e-07
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 59 1e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 58 2e-07
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 56 6e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 56 8e-07
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 56 8e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 55 2e-06
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 54 3e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 54 4e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 53 5e-06
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 52 9e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 52 9e-06
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 49 9e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 41 0.030
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 40 0.053
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 38 0.16
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 38 0.21
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.49
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 36 0.86
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.1
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 36 1.1
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 36 1.1
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.0
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.0
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 35 2.0
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.5
UniRef50_Q380W9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 6.1
UniRef50_UPI000065DB35 Cluster: UPI000065DB35 related cluster; n... 33 8.0
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 33 8.0
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 33 8.0
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 8.0
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 131 bits (316), Expect = 2e-29
Identities = 62/84 (73%), Positives = 68/84 (80%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGH
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGH 243
Query: 434 PEVYILILPGFGIISHIISQERGK 505
PEVYILILPGFGIISHI+S GK
Sbjct: 244 PEVYILILPGFGIISHIVSTFSGK 267
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 124 GSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSS 160
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V AHH+FT G+D+DTRAYFT+AT+IIAVP
Sbjct: 287 FLVWAHHMFTVGLDVDTRAYFTAATMIIAVP 317
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 127 bits (307), Expect = 2e-28
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = +2
Query: 257 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 436
PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 437 EVYILILPGFGIISHIISQERGKKK 511
EVYILILPGFGIISH+++ GKK+
Sbjct: 242 EVYILILPGFGIISHVVAYYAGKKE 266
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 121 GAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
Score = 56.0 bits (129), Expect = 8e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
FIV AHH+FT G+D+DTRAYFTSAT+IIA+P
Sbjct: 285 FIVWAHHMFTVGMDVDTRAYFTSATMIIAIP 315
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 127 bits (307), Expect = 2e-28
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGH
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGH 240
Query: 434 PEVYILILPGFGIISHIISQERGK 505
PEVYILI+PGFG++SHI+S GK
Sbjct: 241 PEVYILIIPGFGMVSHIVSAFSGK 264
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 121 GAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/31 (64%), Positives = 28/31 (90%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V +HH++ G+D+DTRAYFT+AT+IIAVP
Sbjct: 284 FLVWSHHMYAVGLDVDTRAYFTAATMIIAVP 314
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 127 bits (306), Expect = 3e-28
Identities = 61/84 (72%), Positives = 67/84 (79%)
Frame = +2
Query: 260 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 439
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPE
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPE 226
Query: 440 VYILILPGFGIISHIISQERGKKK 511
VYILILPGFGIISH+I E GKK+
Sbjct: 227 VYILILPGFGIISHMIFNESGKKE 250
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = +1
Query: 487 FTRKRKKKTFXXXXXXXXXXXXXXXXFIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F KK+TF FIV AHH+FT G+D+DTRAYFTSAT+IIA+P
Sbjct: 243 FNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIP 299
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 126 bits (303), Expect = 6e-28
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = +2
Query: 257 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 436
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 437 EVYILILPGFGIISHIISQERGKKK 511
EVYILILPGFG+ISHI++ GKK+
Sbjct: 242 EVYILILPGFGMISHIVTYYSGKKE 266
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 121 GAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSS 157
Score = 56.0 bits (129), Expect = 8e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
FIV AHH+FT G+D+DTRAYFTSAT+IIA+P
Sbjct: 285 FIVWAHHMFTVGMDVDTRAYFTSATMIIAIP 315
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 125 bits (302), Expect = 8e-28
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = +2
Query: 257 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 436
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 183 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 242
Query: 437 EVYILILPGFGIISHIISQERGKKK 511
EVYILILPGFG+ISH+++ GKK+
Sbjct: 243 EVYILILPGFGMISHVVTYYAGKKE 267
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 122 GAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISS 158
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 125 bits (301), Expect = 1e-27
Identities = 58/85 (68%), Positives = 67/85 (78%)
Frame = +2
Query: 257 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 436
PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 437 EVYILILPGFGIISHIISQERGKKK 511
EVYILILPGFG+ISH+++ GKK+
Sbjct: 242 EVYILILPGFGMISHVVTYYAGKKE 266
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 121 GAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
Score = 56.0 bits (129), Expect = 8e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
FIV AHH+FT G+D+DTRAYFTSAT+IIA+P
Sbjct: 285 FIVWAHHMFTVGMDVDTRAYFTSATMIIAIP 315
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 124 bits (300), Expect = 1e-27
Identities = 58/79 (73%), Positives = 65/79 (82%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
IPLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGH
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGH 248
Query: 434 PEVYILILPGFGIISHIIS 490
PEVYILILPGFG+ISHI+S
Sbjct: 249 PEVYILILPGFGMISHIVS 267
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 129 GVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASS 165
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
FIV AHH++T G+D+DTRAYFT+AT+IIAVP
Sbjct: 292 FIVWAHHMYTVGLDVDTRAYFTAATMIIAVP 322
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 116 bits (280), Expect = 4e-25
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 434 PEVYILILPGFGIISHIIS 490
PEVYILILPGFG++SHII+
Sbjct: 245 PEVYILILPGFGLVSHIIA 263
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 125 GPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +1
Query: 502 KKKTFXXXXXXXXXXXXXXXXFIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
KK+ F FIV AHH++T GID T+AYFT+AT++IA+P
Sbjct: 267 KKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIP 318
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 116 bits (278), Expect = 7e-25
Identities = 51/79 (64%), Positives = 63/79 (79%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGH
Sbjct: 287 VPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGH 346
Query: 434 PEVYILILPGFGIISHIIS 490
PEVYI+ILP FG+ISHI++
Sbjct: 347 PEVYIVILPAFGVISHIVA 365
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 227 GAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
Score = 39.5 bits (88), Expect = 0.070
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V AHH++T G+ + +AYF AT++IAVP
Sbjct: 390 FVVWAHHMYTVGMTLTQQAYFMVATMVIAVP 420
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 114 bits (274), Expect = 2e-24
Identities = 64/112 (57%), Positives = 72/112 (64%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGH
Sbjct: 178 MPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGH 237
Query: 434 PEVYILILPGFGIISHIISQERGKKKLLVV*G*FMLY*PLGY*GSLFELIIY 589
P++ + ++ K KLLVV FM L Y LFELI+Y
Sbjct: 238 PKLMFSFSQDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMY 289
Score = 75.8 bits (178), Expect = 9e-13
Identities = 40/63 (63%), Positives = 40/63 (63%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 251
NGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFD
Sbjct: 117 NGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFD 176
Query: 252 QYP 260
Q P
Sbjct: 177 QMP 179
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 113 bits (273), Expect = 3e-24
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGH
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGH 241
Query: 434 PEVYILILPGFGIISHIIS 490
PEVYILI+PGFGIISH++S
Sbjct: 242 PEVYILIIPGFGIISHVVS 260
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 121 SGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V +HH++ G+D DTRAYFTSAT+IIA+P
Sbjct: 285 FLVWSHHMYIVGLDADTRAYFTSATMIIAIP 315
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 113 bits (272), Expect = 4e-24
Identities = 52/79 (65%), Positives = 60/79 (75%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGH
Sbjct: 182 MPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGH 241
Query: 434 PEVYILILPGFGIISHIIS 490
PEVYILI+PGFGI+SHI+S
Sbjct: 242 PEVYILIIPGFGIVSHIVS 260
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 121 SGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V +HH++ G+D DTRAYFTSAT+IIA+P
Sbjct: 285 FLVWSHHMYIVGLDADTRAYFTSATMIIAIP 315
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 112 bits (269), Expect = 8e-24
Identities = 53/79 (67%), Positives = 61/79 (77%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGH
Sbjct: 224 MPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGH 283
Query: 434 PEVYILILPGFGIISHIIS 490
PEVYI+ILPGFGIIS I+S
Sbjct: 284 PEVYIMILPGFGIISQIVS 302
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 45.2 bits (102), Expect = 0.001
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V AHH+FT G+ ++ + YFT+AT++IAVP
Sbjct: 327 FVVWAHHMFTTGMSVNVKMYFTAATMVIAVP 357
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 110 bits (265), Expect = 3e-23
Identities = 55/82 (67%), Positives = 59/82 (71%)
Frame = +2
Query: 260 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 439
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPE
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPE 243
Query: 440 VYILILPGFGIISHIISQERGK 505
VYILI+PGFGIIS IS K
Sbjct: 244 VYILIIPGFGIISTTISANSNK 265
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
NG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 121 NGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 53.2 bits (122), Expect = 5e-06
Identities = 21/31 (67%), Positives = 29/31 (93%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V +HH++T G+D+DTRAYFT+AT+IIAVP
Sbjct: 285 FVVWSHHMYTVGLDVDTRAYFTAATLIIAVP 315
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 109 bits (263), Expect = 4e-23
Identities = 52/67 (77%), Positives = 55/67 (82%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGH
Sbjct: 154 MPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGH 213
Query: 434 PEVYILI 454
PEVYILI
Sbjct: 214 PEVYILI 220
Score = 75.8 bits (178), Expect = 9e-13
Identities = 40/63 (63%), Positives = 40/63 (63%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 251
NGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFD
Sbjct: 93 NGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFD 152
Query: 252 QYP 260
Q P
Sbjct: 153 QMP 155
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 108 bits (260), Expect = 1e-22
Identities = 55/84 (65%), Positives = 61/84 (72%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+ LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGH
Sbjct: 208 LALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGH 267
Query: 434 PEVYILILPGFGIISHIISQERGK 505
PEVYILI+PGFGIIS +IS K
Sbjct: 268 PEVYILIIPGFGIISTVISANSNK 291
Score = 53.2 bits (122), Expect = 5e-06
Identities = 21/31 (67%), Positives = 29/31 (93%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
FIV +HH++T G+D+DTRAYFT+AT+IIA+P
Sbjct: 311 FIVWSHHMYTVGLDVDTRAYFTAATLIIAIP 341
Score = 52.4 bits (120), Expect = 9e-06
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
NG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 147 NGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 99 bits (238), Expect = 5e-20
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +2
Query: 320 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 484
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
Score = 39.1 bits (87), Expect = 0.093
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 99 bits (238), Expect = 5e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +2
Query: 329 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 505
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = +1
Query: 580 HHIFTGGIDIDTRAYFTSATIIIAVP 657
HH++T G+D+DTRAYFT+AT+IIAVP
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVP 374
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Frame = +3
Query: 75 GAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 150 GVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 99.1 bits (236), Expect = 8e-20
Identities = 48/87 (55%), Positives = 61/87 (70%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGH
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGH 258
Query: 434 PEVYILILPGFGIISHIISQERGKKKL 514
PEVYILI+P FG++S I+ Q KK +
Sbjct: 259 PEVYILIVPVFGVVSQIV-QVYAKKPI 284
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 139 GPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F V +HH+FT G+D D+RAYF+ A++IIA+P
Sbjct: 302 FCVWSHHMFTVGLDADSRAYFSGASLIIAIP 332
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 99.1 bits (236), Expect = 8e-20
Identities = 48/87 (55%), Positives = 61/87 (70%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGH
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGH 258
Query: 434 PEVYILILPGFGIISHIISQERGKKKL 514
PEVYILI+P FG++S I+ Q KK +
Sbjct: 259 PEVYILIVPVFGVVSQIV-QVYAKKPI 284
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 139 GPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 95.5 bits (227), Expect = 1e-18
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +2
Query: 320 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 499
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 500 GK 505
K
Sbjct: 266 AK 267
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V HH+F G+DIDTRAYFT+AT++IAVP
Sbjct: 288 FLVWGHHMFVAGLDIDTRAYFTAATLMIAVP 318
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 94.3 bits (224), Expect = 2e-18
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2
Query: 260 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 439
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 440 VYILILPGFGIISHII 487
VYI++LP FG+IS I+
Sbjct: 246 VYIILLPVFGLISTIV 261
Score = 38.7 bits (86), Expect = 0.12
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 577 AHHIFTGGIDIDTRAYFTSATIIIAVP 657
AHH+F G+D+D+RAYF +I+I +P
Sbjct: 291 AHHMFVVGMDVDSRAYFGGVSILIGLP 317
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G G G T+YP L H + D +F++HL GISS
Sbjct: 124 GMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 93.1 bits (221), Expect = 5e-18
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +2
Query: 323 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 490
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 46.8 bits (106), Expect = 5e-04
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = +1
Query: 568 IV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
+V HH++T G+++DTRAYFTS TI+I++P
Sbjct: 291 LVWVHHMYTTGLEVDTRAYFTSTTILISIP 320
Score = 35.9 bits (79), Expect = 0.86
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 185
G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 126 GGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +2
Query: 353 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 511
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK++
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKRE 243
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V AHH+FT G+D+DTRAYFT+AT+IIAVP
Sbjct: 262 FLVWAHHMFTVGMDVDTRAYFTAATMIIAVP 292
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
I +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGH
Sbjct: 191 ISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGH 250
Query: 434 PEVYILILPGFGIISHII 487
PEVY++ILP FGIIS +
Sbjct: 251 PEVYVIILPVFGIISEAV 268
Score = 46.8 bits (106), Expect = 5e-04
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +1
Query: 580 HHIFTGGIDIDTRAYFTSATIIIAVP 657
HH++T G+DIDTR YF++AT+IIA+P
Sbjct: 300 HHMYTAGLDIDTRTYFSAATMIIAIP 325
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 89.4 bits (212), Expect = 7e-17
Identities = 43/60 (71%), Positives = 46/60 (76%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 100 MPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 40 GAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 86.2 bits (204), Expect = 6e-16
Identities = 48/103 (46%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +1
Query: 352 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFPYYFTRKRKK-KTFXXXX 528
K KYIIF S W F+STFILIFWT SLYFNFT IWYNF YYF K KK +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 529 XXXXXXXXXXXXFIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
+ + + +I++ YFTSAT+IIAVP
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSN-SYWYSTYFTSATMIIAVP 108
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 83.8 bits (198), Expect = 3e-15
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +2
Query: 272 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 451
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 452 ILPGFGIISHIIS 490
ILPGFGIIS ++S
Sbjct: 253 ILPGFGIISLLLS 265
Score = 39.5 bits (88), Expect = 0.070
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 129 GSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 83.4 bits (197), Expect = 4e-15
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = +2
Query: 251 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 430
S+ LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFG
Sbjct: 164 SLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFG 223
Query: 431 HPEVYILILPGFGIISHII 487
HPEVY++ILP FG+ S I
Sbjct: 224 HPEVYVVILPVFGLFSSSI 242
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/30 (70%), Positives = 28/30 (93%)
Frame = +1
Query: 568 IV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
+V AHH++T G+DIDTR+YFT+AT+IIAVP
Sbjct: 269 VVWAHHMYTAGLDIDTRSYFTAATMIIAVP 298
Score = 36.7 bits (81), Expect = 0.49
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 78 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/59 (69%), Positives = 44/59 (74%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 430
IPLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 182 IPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 122 GAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSS 158
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
FIV A H++ G+D+DTRAYFT+AT+IIAVP
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVP 280
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 82.6 bits (195), Expect = 8e-15
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +2
Query: 251 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 430
S+PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+
Sbjct: 191 SMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYS 250
Query: 431 HPEVYILILPGFGIISHII 487
HP VYI+ILP FG+IS +I
Sbjct: 251 HPAVYIMILPFFGVISEVI 269
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 568 IV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
IV AHH+FT G R +F + T++IAVP
Sbjct: 296 IVWAHHMFTSGTPGWLRMFFMATTMLIAVP 325
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
IPLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGH
Sbjct: 197 IPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGH 256
Query: 434 PEVYILILPGFGIISHIIS 490
PEVYI+ LP G++S I++
Sbjct: 257 PEVYIIFLPAVGMVSSIVA 275
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F FGH
Sbjct: 200 VPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGH 259
Query: 434 PEVYILILPGFGIISHII 487
PEVYILILPGFG+IS +I
Sbjct: 260 PEVYILILPGFGMISEVI 277
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 80.6 bits (190), Expect = 3e-14
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 418
+PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 121 GAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 79.0 bits (186), Expect = 9e-14
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 418
+ LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 164 VSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 103 SGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = -3
Query: 417 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGIDQM 244
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G+ M
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = -2
Query: 184 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAP 74
+E PAKC+EKI STD P CAI SGG TVHPVP P
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTP 114
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = +2
Query: 326 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 505
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 506 K 508
K
Sbjct: 319 K 319
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/78 (51%), Positives = 47/78 (60%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV + AF A LL DR+ T FF P GGD +L+QHLF FFGH
Sbjct: 199 MPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGH 258
Query: 434 PEVYILILPGFGIISHII 487
PEVYILILP GIIS ++
Sbjct: 259 PEVYILILPTMGIISEVL 276
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/61 (60%), Positives = 46/61 (75%)
Frame = +2
Query: 326 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 505
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 506 K 508
+
Sbjct: 350 R 350
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 76.2 bits (179), Expect = 7e-13
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQ 241
Query: 434 PEVYILIL 457
I++L
Sbjct: 242 TVATIIML 249
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 121 SGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 75.8 bits (178), Expect = 9e-13
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +2
Query: 320 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 487
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFG 430
+PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+
Sbjct: 207 MPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYS 265
Query: 431 HPEVYILILPGFGIISHIIS 490
HP VYI++LP FG++S +++
Sbjct: 266 HPAVYIMVLPSFGVMSEVVA 285
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +2
Query: 326 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 490
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
+ V AHH+FT G+DID+R+YF+ AT II++P
Sbjct: 294 YFVWAHHMFTVGLDIDSRSYFSIATSIISIP 324
Score = 33.5 bits (73), Expect = 4.6
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 84 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 185
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +2
Query: 326 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 505
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTR 425
Query: 506 K 508
+
Sbjct: 426 R 426
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF 418
+PL + + +TA A +LL DR+ T FF GGGDPIL+QHLF
Sbjct: 214 LPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLF 273
Query: 419 *FFGHPEVYILILPGFGIISHIIS 490
FGHPEVYI+ILP +GI+ ++S
Sbjct: 274 WIFGHPEVYIMILPAWGILGDVLS 297
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 78 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 73.3 bits (172), Expect = 5e-12
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +2
Query: 323 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 484
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 72.5 bits (170), Expect = 8e-12
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 430
+PLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 182 LPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 121 SGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISS 158
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 72.5 bits (170), Expect = 8e-12
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Frame = +2
Query: 320 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 484
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 485 ISQ 493
I +
Sbjct: 268 IQR 270
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Frame = +2
Query: 335 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 484
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 485 ISQERGK 505
IS K
Sbjct: 298 ISTHARK 304
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLF + + + +++ DR T+FF+P GG+ ++++HLF FGH
Sbjct: 190 LPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGH 249
Query: 434 PEVYILILPGFGIISHII 487
PEVYILILP FGI S +I
Sbjct: 250 PEVYILILPAFGIFSEVI 267
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = +2
Query: 251 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 430
++PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWN 245
Query: 431 HPEVYILIL 457
HPEV I+ L
Sbjct: 246 HPEVKIICL 254
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 127 GAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/78 (43%), Positives = 43/78 (55%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV TA + +R T FFD A GG P+L+Q LF FFGH
Sbjct: 179 MPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGH 238
Query: 434 PEVYILILPGFGIISHII 487
PEVYILILP G++S ++
Sbjct: 239 PEVYILILPAMGLVSELL 256
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/78 (43%), Positives = 45/78 (57%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FGH
Sbjct: 201 MPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGH 260
Query: 434 PEVYILILPGFGIISHII 487
PEVYILILP GIIS +I
Sbjct: 261 PEVYILILPAMGIISEVI 278
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/78 (46%), Positives = 46/78 (58%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+P+FV AV + +F A +L DR FF A GDPIL+QHLF FFGH
Sbjct: 204 MPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGH 262
Query: 434 PEVYILILPGFGIISHII 487
PEVYI+ +P G++S II
Sbjct: 263 PEVYIIFIPALGMVSSII 280
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 69.7 bits (163), Expect = 6e-11
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQ 258
Query: 434 --PEVYILIL 457
P + I+I+
Sbjct: 259 IWPIIIIIII 268
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 139 GPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/78 (43%), Positives = 45/78 (57%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+P+F + + + A +L DR L +DPA GG +L+QHLF FFGH
Sbjct: 207 MPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGH 265
Query: 434 PEVYILILPGFGIISHII 487
PEVY+L LP FGI+S II
Sbjct: 266 PEVYVLALPFFGIVSEII 283
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +2
Query: 335 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 505
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V HH+F G +I TR +++ TI+I++P
Sbjct: 292 FVVWMHHMFITGTNIYTRLFYSITTILISIP 322
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 66.9 bits (156), Expect = 4e-10
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+ H
Sbjct: 200 LPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSH 259
Query: 434 PEVYILILPGFGIISHII 487
P VYI++LP +IS ++
Sbjct: 260 PAVYIMVLPAMAVISEVV 277
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 66.5 bits (155), Expect = 5e-10
Identities = 33/78 (42%), Positives = 45/78 (57%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+P+F A+ I A A +L +R+ FF GGDP+L+QHLF FFGH
Sbjct: 207 MPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGH 266
Query: 434 PEVYILILPGFGIISHII 487
PEVYI+ LP G++S I+
Sbjct: 267 PEVYIIFLPAAGLVSMIV 284
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 66.5 bits (155), Expect = 5e-10
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +2
Query: 320 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 487
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 66.1 bits (154), Expect = 7e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 323 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 502
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S G
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308
Query: 503 KK 508
K+
Sbjct: 309 KR 310
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
F+V HH FT G + A+F AT+II++P
Sbjct: 329 FMVWLHHFFTMGSGANVNAFFGIATMIISIP 359
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 65.7 bits (153), Expect = 9e-10
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPIL 403
+PL + A ITA A +L+ DR+L TSFF AG GG P+L
Sbjct: 233 LPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVL 292
Query: 404 YQHLF*FFGHPEVYILILPGFGIISHIISQERGK 505
+QHLF F GHPEVYI+++P GI S +I+ K
Sbjct: 293 FQHLFWFLGHPEVYIVLIPALGITSEVIATNARK 326
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 110 GAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2
Query: 257 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 379
PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 171 PLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +2
Query: 326 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 478
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPI 400
+PL + A+ ITA A ++L DR + T FF P AGGG P+
Sbjct: 219 LPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPL 278
Query: 401 LYQHLF*FFGHPEVYILILPGFGIISHIIS 490
L+QHLF F+ HP VYI+ILP G++S I++
Sbjct: 279 LWQHLFWFYSHPAVYIMILPAMGMVSDILA 308
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+P++V +V + A ++L +R + S+F+PA GGDP+L+Q F F+ H
Sbjct: 191 MPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSH 250
Query: 434 PEVYILILPGFGIISHIIS 490
P VY+++LP GI++ + S
Sbjct: 251 PTVYVMLLPYLGILAEVAS 269
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = +2
Query: 326 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 472
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 473 ISHII 487
+SHI+
Sbjct: 302 VSHIL 306
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/78 (41%), Positives = 45/78 (57%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+P+F A+ + A A +L +R + FF GGDP+L+QHLF FFGH
Sbjct: 266 MPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGH 325
Query: 434 PEVYILILPGFGIISHII 487
PEVYI+ LP G++S I+
Sbjct: 326 PEVYIIFLPAAGMVSMIV 343
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/59 (52%), Positives = 34/59 (57%)
Frame = +1
Query: 256 TLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 432
T ICM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 94 TFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +3
Query: 72 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 161
NGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 36 NGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +2
Query: 326 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 505
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 506 K 508
+
Sbjct: 309 R 309
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +2
Query: 335 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 505
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ GK
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 62.5 bits (145), Expect = 9e-09
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKN 256
Query: 434 PEVYILILPGFGI 472
P V ILI GI
Sbjct: 257 P-VLILIWLTSGI 268
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 139 GPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/79 (41%), Positives = 42/79 (53%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+P+F IT A+ +L DR FF GG P+L+ +LF +GH
Sbjct: 221 MPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGH 280
Query: 434 PEVYILILPGFGIISHIIS 490
PEVYI+ILP FGI S IIS
Sbjct: 281 PEVYIVILPAFGIFSEIIS 299
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 347 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 487
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 326 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 490
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +2
Query: 335 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 487
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +2
Query: 326 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 487
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 121 GAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +2
Query: 335 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 487
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +2
Query: 338 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 490
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 57.6 bits (133), Expect = 2e-07
Identities = 33/84 (39%), Positives = 41/84 (48%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+PLF TA L DR L+ FF GG+ + + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 434 PEVYILILPGFGIISHIISQERGK 505
PEVYILILP FG+ S I S GK
Sbjct: 305 PEVYILILPAFGVYSEIFSTFSGK 328
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +1
Query: 502 KKKTFXXXXXXXXXXXXXXXXFIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
KK+ F F+V AHH+FT G+D+DTRAYFTSAT+IIAVP
Sbjct: 177 KKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVP 228
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 437 EVYILILPGFGIISHIISQERGKKK 511
EVYILILPGFG+ISHIISQE GKK+
Sbjct: 155 EVYILILPGFGMISHIISQESGKKE 179
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 16 GVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 56.0 bits (129), Expect = 8e-07
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
FIV AHH+FT G+D+DTRAYFTSAT+IIA+P
Sbjct: 50 FIVWAHHMFTVGMDVDTRAYFTSATMIIAIP 80
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 422 FFGHPEVYILILPGFGIISHIISQERGKKK 511
FFGHPEVYILILPGFG+ISHI++ GKK+
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKE 31
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/68 (44%), Positives = 38/68 (55%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
I LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH
Sbjct: 14 INLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGH 73
Query: 434 PEVYILIL 457
+V LIL
Sbjct: 74 TDVLFLIL 81
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 433
+P+F ++ T+ A + + L S F+P GG P+LYQ F F+ H
Sbjct: 199 MPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSH 258
Query: 434 PEVYILILPGFGIISHIIS 490
P VY+++LP GI + + S
Sbjct: 259 PAVYVMLLPYLGIGAEVAS 277
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GGDPI 400
+P+ + + ITA + + DR T FF P+G GG P+
Sbjct: 222 LPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQPL 281
Query: 401 LYQHLF*FFGHPEVYILILPGFGIISHIIS 490
L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 282 LWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 53.2 bits (122), Expect = 5e-06
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +2
Query: 233 K*YII*SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 412
K Y + ++PLFV AV A G +LL ++ S++ GG +++++
Sbjct: 204 KGYRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWEN 262
Query: 413 LF*FFGHPEVYILILPGFGIISHIIS 490
LF +FGHPEVY+L+LPG G + +S
Sbjct: 263 LFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 52.4 bits (120), Expect = 9e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 409 TFILIFWTS*SLYFNFTRIWYNFPYYFTRKRKK 507
+ ++IFW+S SLYFN IWYNFPYY+T K K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGK 34
Score = 35.5 bits (78), Expect = 1.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 474 FPILFHKKEEKKNFWLFRDNLCYTSHWVIRVHCLS 578
FP + K K W F +NLCY S+W + +S
Sbjct: 24 FPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 52.4 bits (120), Expect = 9e-06
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 400
IP+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 401 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 508
L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +1
Query: 565 FIV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
+ V AHH+FT G+D+DTR YF+SAT++IA+P
Sbjct: 42 YFVWAHHMFTVGLDVDTRVYFSSATLLIALP 72
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 75 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 185
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 268 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 420
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +3
Query: 105 PLSSNIAHRGRSVDLAIFSLHLAGISS 185
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 352
+PLF+ AV IT AGAIT+LLTDR
Sbjct: 122 VPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2
Query: 422 FFGHPEVYILILPGFGIISHI 484
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 40.7 bits (91), Expect = 0.030
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +1
Query: 577 AHHIFTGGIDIDTRAYFTSATIIIAVP 657
AHH+ T G++ DTRAYF++ TI+IA+P
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIP 28
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 39.9 bits (89), Expect = 0.053
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = +1
Query: 586 IFTGGIDIDTRAYFTSATIIIAVP 657
++ G+D+DTRAYFT+AT+IIAVP
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVP 24
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 38.3 bits (85), Expect = 0.16
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 580 HHIFTGGIDIDTRAYFTSATIIIAVP 657
HH+FT G+D++T +F+S T+II VP
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVP 78
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 37.9 bits (84), Expect = 0.21
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 604 DIDTRAYFTSATIIIAVP 657
D+DTRAYFTSAT+IIAVP
Sbjct: 1 DVDTRAYFTSATMIIAVP 18
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 37.9 bits (84), Expect = 0.21
Identities = 13/24 (54%), Positives = 22/24 (91%)
Frame = +1
Query: 586 IFTGGIDIDTRAYFTSATIIIAVP 657
++T G+++DTRA+FTS TI+I++P
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIP 24
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.49
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 365 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 487
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 35.9 bits (79), Expect = 0.86
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +1
Query: 253 NTLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 432
+T I M +Y+ TT S S +N N SKL++I+ S PN I ILI T
Sbjct: 85 DTSILMKNPNYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRT 144
Query: 433 S*SLYFNFTRI 465
L+ N T I
Sbjct: 145 PSGLHSNSTSI 155
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 386 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 502
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 607 IDTRAYFTSATIIIAVP 657
+DTRAYFTSAT+IIAVP
Sbjct: 2 VDTRAYFTSATMIIAVP 18
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 568 IV*AHHIFTGGIDIDTRAYFTSATIIIAVP 657
+V HH+F G D+ T +F+S T+II VP
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVP 55
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 434 PEVYILILPGFGIISHIISQERGKK 508
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 392 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 505
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 513 FWLFRDNLCYTSHWVIRVHCLSSSYIHWRYRY*YTSIFYLSYYNYCCTN 659
FW+ + L + S+W + C+S ++H R +TSI Y + + C +N
Sbjct: 36 FWVPGNGLRHDSNWSPSIPCMSPPHVHSRNGRSHTSILYCRHNDNCRSN 84
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 398 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 505
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q380W9 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 232
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 537 CYTSHWVIRVHCLSSSYIHWRYRY*YTSIFYLSYYN 644
CY S++ IR++ L++ H+ Y + Y +Y SYYN
Sbjct: 120 CYCSYYNIRIYTLTTLSYHYYYHHHY--YYYCSYYN 153
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 6.1
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 132 GRSVDLAIFSLHLAGISS 185
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_UPI000065DB35 Cluster: UPI000065DB35 related cluster; n=1;
Takifugu rubripes|Rep: UPI000065DB35 UniRef100 entry -
Takifugu rubripes
Length = 110
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 516 WLFRDNLCYTSHWVIRVHCLSSSYIHWRYRY*YTSIF-YLSYYNY 647
WL+ YTSHW+ L +SY + R+ YTS + Y S++ Y
Sbjct: 47 WLYTSCWLYTSHWLYTSCWLFTSYWLYTSRWLYTSCWLYTSHWLY 91
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 601 IDIDTRAYFTSATIIIAVP 657
+ + TRAYFTSAT+IIAVP
Sbjct: 1 LTLHTRAYFTSATMIIAVP 19
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.7 bits (71), Expect = 8.0
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 254 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 364
I L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 165 ISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 8.0
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 405 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 268
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,494,617
Number of Sequences: 1657284
Number of extensions: 9271024
Number of successful extensions: 19401
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 18238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19301
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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