Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30516
         (533 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   139   2e-33
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   139   2e-33
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   139   2e-33
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   139   2e-33
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   136   2e-32
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    82   4e-16
AE014298-3124|AAS65412.1| 1000|Drosophila melanogaster CG1391-PC...    29   4.0  
AE014298-3123|AAS65411.1| 1240|Drosophila melanogaster CG1391-PD...    29   4.0  
AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB...    29   4.0  
AY069030-1|AAL39175.1|  433|Drosophila melanogaster GH01429p pro...    28   9.2  
AE014297-2410|AAF55469.1|  433|Drosophila melanogaster CG7379-PA...    28   9.2  

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  139 bits (337), Expect = 2e-33
 Identities = 65/74 (87%), Positives = 71/74 (95%)
 Frame = +3

Query: 33  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 212
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 213 EEEVEKIITIMSNP 254
           EEEV+K++TI+SNP
Sbjct: 61  EEEVDKVVTIISNP 74



 Score =  125 bits (301), Expect = 4e-29
 Identities = 53/60 (88%), Positives = 59/60 (98%)
 Frame = +2

Query: 257 QYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 436
           QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRVRGQH
Sbjct: 76  QYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQH 135


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  139 bits (337), Expect = 2e-33
 Identities = 65/74 (87%), Positives = 71/74 (95%)
 Frame = +3

Query: 33  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 212
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 213 EEEVEKIITIMSNP 254
           EEEV+K++TI+SNP
Sbjct: 61  EEEVDKVVTIISNP 74



 Score =  125 bits (301), Expect = 4e-29
 Identities = 53/60 (88%), Positives = 59/60 (98%)
 Frame = +2

Query: 257 QYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 436
           QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRVRGQH
Sbjct: 76  QYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQH 135


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  139 bits (337), Expect = 2e-33
 Identities = 65/74 (87%), Positives = 71/74 (95%)
 Frame = +3

Query: 33  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 212
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 213 EEEVEKIITIMSNP 254
           EEEV+K++TI+SNP
Sbjct: 61  EEEVDKVVTIISNP 74



 Score =  125 bits (301), Expect = 4e-29
 Identities = 53/60 (88%), Positives = 59/60 (98%)
 Frame = +2

Query: 257 QYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 436
           QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRVRGQH
Sbjct: 76  QYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQH 135


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  139 bits (337), Expect = 2e-33
 Identities = 65/74 (87%), Positives = 71/74 (95%)
 Frame = +3

Query: 33  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 212
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 213 EEEVEKIITIMSNP 254
           EEEV+K++TI+SNP
Sbjct: 61  EEEVDKVVTIISNP 74



 Score =  125 bits (301), Expect = 4e-29
 Identities = 53/60 (88%), Positives = 59/60 (98%)
 Frame = +2

Query: 257 QYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 436
           QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRVRGQH
Sbjct: 76  QYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQH 135


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  136 bits (329), Expect = 2e-32
 Identities = 64/74 (86%), Positives = 70/74 (94%)
 Frame = +3

Query: 33  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 212
           MSLVIP+KFQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 213 EEEVEKIITIMSNP 254
           EEEV+K++TI+SNP
Sbjct: 61  EEEVDKVVTIISNP 74



 Score =  125 bits (301), Expect = 4e-29
 Identities = 53/60 (88%), Positives = 59/60 (98%)
 Frame = +2

Query: 257 QYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 436
           QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRVRGQH
Sbjct: 76  QYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQH 135


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = +3

Query: 129 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNP 254
           IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNP 42


>AE014298-3124|AAS65412.1| 1000|Drosophila melanogaster CG1391-PC,
           isoform C protein.
          Length = 1000

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/52 (21%), Positives = 25/52 (48%)
 Frame = +2

Query: 116 CDDGYQRCWPEVLQHCSQKSRH*S*QACWRMHRRRG*KNYHYHVESWQYKIP 271
           C   Y R W +  + C  K+     Q   +  +++  +++H+H++  Q + P
Sbjct: 58  CSYAYNRLWLQTCEMCEAKAEQQQQQLQLQQQQQQQQQHHHHHLQQQQAEAP 109


>AE014298-3123|AAS65411.1| 1240|Drosophila melanogaster CG1391-PD,
           isoform D protein.
          Length = 1240

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/52 (21%), Positives = 25/52 (48%)
 Frame = +2

Query: 116 CDDGYQRCWPEVLQHCSQKSRH*S*QACWRMHRRRG*KNYHYHVESWQYKIP 271
           C   Y R W +  + C  K+     Q   +  +++  +++H+H++  Q + P
Sbjct: 298 CSYAYNRLWLQTCEMCEAKAEQQQQQLQLQQQQQQQQQHHHHHLQQQQAEAP 349


>AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB,
           isoform B protein.
          Length = 1594

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/52 (21%), Positives = 25/52 (48%)
 Frame = +2

Query: 116 CDDGYQRCWPEVLQHCSQKSRH*S*QACWRMHRRRG*KNYHYHVESWQYKIP 271
           C   Y R W +  + C  K+     Q   +  +++  +++H+H++  Q + P
Sbjct: 652 CSYAYNRLWLQTCEMCEAKAEQQQQQLQLQQQQQQQQQHHHHHLQQQQAEAP 703


>AY069030-1|AAL39175.1|  433|Drosophila melanogaster GH01429p
           protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 281 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 370
           +N  ++I+DGK  QL +   +  L+ED +R
Sbjct: 97  VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126


>AE014297-2410|AAF55469.1|  433|Drosophila melanogaster CG7379-PA
           protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 281 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 370
           +N  ++I+DGK  QL +   +  L+ED +R
Sbjct: 97  VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,540,629
Number of Sequences: 53049
Number of extensions: 481782
Number of successful extensions: 1343
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)