Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30516
(533 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 27 0.16
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 25 0.64
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 25 0.64
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.1
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 2.6
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 4.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 6.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 7.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.9
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 7.9
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 26.6 bits (56), Expect = 0.16
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 263 KIPDWFLNRQKDIVDGKYSQLTSSNLDSKLRED-LERLKKI 382
KI WFL++ K+I+D Y L +++ +L D L R K+I
Sbjct: 275 KIDKWFLHKMKNIID-YYLVLENTDHTKQLSHDVLLRAKQI 314
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.6 bits (51), Expect = 0.64
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 265 LILPGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLIAVIANITL 104
L +PG+ MI I F+TS ++ R + + T+ L PT ++ A+ L
Sbjct: 541 LCIPGY-MIYIWFTTSGTISEKFRKLIRIEDDVATLRMKLNPTKAASINADFEL 593
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.6 bits (51), Expect = 0.64
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 265 LILPGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLIAVIANITL 104
L +PG+ MI I F+TS ++ R + + T+ L PT ++ A+ L
Sbjct: 594 LCIPGY-MIYIWFTTSGTISEKFRKLIRIEDNVATLRMKLNPTKAASINADFEL 646
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 290 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 388
+ D + QLTSS +S + D +LK IRA
Sbjct: 1781 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1813
Score = 21.4 bits (43), Expect = 6.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 157 LEYLRPTPLIAVIANITLRL 98
L Y+R P + +A TLRL
Sbjct: 519 LPYIRLIPKVTAVAGETLRL 538
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 290 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 388
+ D + QLTSS +S + D +LK IRA
Sbjct: 1777 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1809
Score = 21.4 bits (43), Expect = 6.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 157 LEYLRPTPLIAVIANITLRL 98
L Y+R P + +A TLRL
Sbjct: 519 LPYIRLIPKVTAVAGETLRL 538
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 138 VGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITI 242
+G+R S V K A T +E+EKI T+
Sbjct: 3 LGQRISGAVAVLRGTSEVKEAQTSTSDEIEKITTV 37
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 4.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 274 VWYLILPGFDMIVIIFSTSSSVHSPARLSR 185
VW +L F+ + +IF SS A L R
Sbjct: 157 VWVELLKHFNYMKVIFIHSSDTDGRALLGR 186
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 6.0
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = -2
Query: 253 GFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLI 128
G M+V IF ++ S+ +P+ L A ++ + P++
Sbjct: 69 GNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCMSPPMV 110
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 186 DQCRLF*EQCWS 151
D+C EQCWS
Sbjct: 829 DECWRLMEQCWS 840
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 186 DQCRLF*EQCWS 151
D+C EQCWS
Sbjct: 867 DECWRLMEQCWS 878
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -2
Query: 268 YLILPGFDMIVIIFSTSSSVHSPARL 191
++ + G M+V IF ++ S+ +P+ L
Sbjct: 30 FVSVMGNGMVVYIFLSTKSLRTPSNL 55
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,566
Number of Sequences: 438
Number of extensions: 3068
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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