Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30515
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   124   2e-30
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    27   0.62 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   7.7  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  124 bits (300), Expect = 2e-30
 Identities = 56/84 (66%), Positives = 64/84 (76%)
 Frame = +1

Query: 256 VAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 435
           V KG TYGKPKSHGVNQLKP R LQS+AEE            +SYWVAQD+++KYFEVI+
Sbjct: 75  VHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYWVAQDAAHKYFEVIM 134

Query: 436 VDPSHKAIRRDPKINWIVNAVHKH 507
           VDP + AIRRDP +NWI NAVHKH
Sbjct: 135 VDPPNNAIRRDPNVNWICNAVHKH 158



 Score =  107 bits (257), Expect = 4e-25
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = +2

Query: 35  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 211
           MGAYRY+QELYRKK SDVMR+LLRVR WQYRQ+TR HRAPRP RP + RRLGY+AK G+
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGF 59



 Score = 72.1 bits (169), Expect = 2e-14
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = +3

Query: 510 EMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAALLRRNTLQLRRKR 644
           E+RGLTSAG+SSRGLGK +RYSQT GGSRRAA +RRN L LRR R
Sbjct: 160 ELRGLTSAGKSSRGLGKAYRYSQTIGGSRRAAGVRRNRLHLRRYR 204


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 578 LRVSMSLAETSGAATSRSQTTHLRCLCTAFT 486
           L + +SLA  +GA  S    T  RC+C A T
Sbjct: 8   LLLLLSLATVNGAFLSNLNATCFRCICDAST 38


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 546 RGLGKGHRYSQTKGGSRRAALL 611
           +G+G GH Y   + G RR   L
Sbjct: 320 KGVGSGHLYYYEENGDRRKITL 341


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,183
Number of Sequences: 2352
Number of extensions: 14073
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)