Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30511
(778 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113410-1|AAM29415.1| 523|Drosophila melanogaster RE13646p pro... 100 4e-21
AE014297-743|AAF54229.2| 523|Drosophila melanogaster CG9601-PA ... 100 4e-21
BT029966-1|ABM92840.1| 297|Drosophila melanogaster IP17876p pro... 31 2.3
AY089509-1|AAL90247.1| 1089|Drosophila melanogaster GH19076p pro... 31 2.3
AE013599-601|AAF59125.2| 1089|Drosophila melanogaster CG8709-PA ... 31 2.3
BT023767-1|AAZ41775.1| 1144|Drosophila melanogaster RE11051p pro... 29 5.4
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy... 29 5.4
AF143207-1|AAF36532.1| 1144|Drosophila melanogaster IF2 protein ... 29 5.4
AE014296-661|AAF47774.2| 1144|Drosophila melanogaster CG10840-PB... 29 5.4
>AY113410-1|AAM29415.1| 523|Drosophila melanogaster RE13646p
protein.
Length = 523
Score = 99.5 bits (237), Expect = 4e-21
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3
Query: 264 DMWDEIDKGELYVFTAKGVKSSDKIASFDMDGTLIKTKSGKVHPVDINDWQIAFPSVPQK 443
+ WD G+L +FT+ GVK S+KIA +DMDGT+IKTKSG V P + +DWQI FP VP+K
Sbjct: 142 ERWDSSGNGKLVIFTSVGVKGSEKIAGYDMDGTIIKTKSGLVFPKNTDDWQIIFPEVPEK 201
Query: 444 LKEFLEKDYKIVLFSNQAPI 503
LK + +KI LF+NQ I
Sbjct: 202 LKNLHKDGFKICLFTNQGGI 221
Score = 93.9 bits (223), Expect = 2e-19
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = +2
Query: 509 GRVKIEDFKKKIESIVQKLNVPVQAYIATGKGIYRKPRIGMWMILTEKKNDGVKVDMNQS 688
G++ ++DFK KI+ IV KL VP+Q +IA G G YRKP GMW L + NDGV++ ++
Sbjct: 224 GKINLDDFKVKIKHIVAKLGVPIQVFIAIGDGFYRKPLTGMWQHLKSEMNDGVEIQEDRC 283
Query: 689 FYCGDAAGR--VANWAPGKKKDHSL-ETLFA 772
F+ GDAAGR A ++KDHSL + LFA
Sbjct: 284 FFVGDAAGRPETGKGATKRRKDHSLVDRLFA 314
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 1 GVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPE 132
GVN G++G L ++ E+ HG +EI+ H + F+PPPE
Sbjct: 79 GVNPCGVNGLMLMQNGERELKHGDLVEIVYGRHQFEVVFNPPPE 122
>AE014297-743|AAF54229.2| 523|Drosophila melanogaster CG9601-PA
protein.
Length = 523
Score = 99.5 bits (237), Expect = 4e-21
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3
Query: 264 DMWDEIDKGELYVFTAKGVKSSDKIASFDMDGTLIKTKSGKVHPVDINDWQIAFPSVPQK 443
+ WD G+L +FT+ GVK S+KIA +DMDGT+IKTKSG V P + +DWQI FP VP+K
Sbjct: 142 ERWDSSGNGKLVIFTSVGVKGSEKIAGYDMDGTIIKTKSGLVFPKNTDDWQIIFPEVPEK 201
Query: 444 LKEFLEKDYKIVLFSNQAPI 503
LK + +KI LF+NQ I
Sbjct: 202 LKNLHKDGFKICLFTNQGGI 221
Score = 93.9 bits (223), Expect = 2e-19
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = +2
Query: 509 GRVKIEDFKKKIESIVQKLNVPVQAYIATGKGIYRKPRIGMWMILTEKKNDGVKVDMNQS 688
G++ ++DFK KI+ IV KL VP+Q +IA G G YRKP GMW L + NDGV++ ++
Sbjct: 224 GKINLDDFKVKIKHIVAKLGVPIQVFIAIGDGFYRKPLTGMWQHLKSEMNDGVEIQEDRC 283
Query: 689 FYCGDAAGR--VANWAPGKKKDHSL-ETLFA 772
F+ GDAAGR A ++KDHSL + LFA
Sbjct: 284 FFVGDAAGRPETGKGATKRRKDHSLVDRLFA 314
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 1 GVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPE 132
GVN G++G L ++ E+ HG +EI+ H + F+PPPE
Sbjct: 79 GVNPCGVNGLMLMQNGERELKHGDLVEIVYGRHQFEVVFNPPPE 122
>BT029966-1|ABM92840.1| 297|Drosophila melanogaster IP17876p
protein.
Length = 297
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 321 KSSDKIASFDMDGTLIKTK-SGKVHPVDINDWQIAFPSVPQKLKEFLEKDYKIVLFSNQA 497
K +DK+ D+DGT+ K+ G + P+ DW A V Q + + YK++ S +A
Sbjct: 65 KHNDKVVISDIDGTITKSDVLGHILPMVGKDW--AQLGVAQLFSKIEQNGYKLLYLSARA 122
>AY089509-1|AAL90247.1| 1089|Drosophila melanogaster GH19076p
protein.
Length = 1089
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 321 KSSDKIASFDMDGTLIKTK-SGKVHPVDINDWQIAFPSVPQKLKEFLEKDYKIVLFSNQA 497
K +DK+ D+DGT+ K+ G + P+ DW A V Q + + YK++ S +A
Sbjct: 803 KHNDKVVISDIDGTITKSDVLGHILPMVGKDW--AQLGVAQLFSKIEQNGYKLLYLSARA 860
>AE013599-601|AAF59125.2| 1089|Drosophila melanogaster CG8709-PA
protein.
Length = 1089
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 321 KSSDKIASFDMDGTLIKTK-SGKVHPVDINDWQIAFPSVPQKLKEFLEKDYKIVLFSNQA 497
K +DK+ D+DGT+ K+ G + P+ DW A V Q + + YK++ S +A
Sbjct: 803 KHNDKVVISDIDGTITKSDVLGHILPMVGKDW--AQLGVAQLFSKIEQNGYKLLYLSARA 860
>BT023767-1|AAZ41775.1| 1144|Drosophila melanogaster RE11051p
protein.
Length = 1144
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 121 PPPESLTTSQNQTFKRKLEDDSTSQRKKSLKVEQVSPSVKEKVEKLL*ICGMK*TKVNCM 300
P PE + T + Q + E+ S+ +KK K ++ P ++K K GM + V M
Sbjct: 251 PEPEPVATEEVQPAAEEEEEKSSKNKKKGKKDKKAEPEEEKKDAKKK---GMSASMVAAM 307
Query: 301 CLQLRE 318
QLR+
Sbjct: 308 QEQLRK 313
>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
chain protein.
Length = 4559
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 297 YVFTAKGVKSSDKIASFDMDGTLIKTKSGKVHPVDINDWQIAFPSVPQKLKEF 455
+V+T++G+ DK+ I G+V P ++ D+ + FP +P + F
Sbjct: 3811 FVYTSRGLFEQDKLIFLTQLCIQILVNLGEVEPTEL-DFLLRFPYMPNQTSNF 3862
>AF143207-1|AAF36532.1| 1144|Drosophila melanogaster IF2 protein
protein.
Length = 1144
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 121 PPPESLTTSQNQTFKRKLEDDSTSQRKKSLKVEQVSPSVKEKVEKLL*ICGMK*TKVNCM 300
P PE + T + Q + E+ S+ +KK K ++ P ++K K GM + V M
Sbjct: 251 PEPEPVATEEVQPAAEEEEEKSSKNKKKGKKDKKAEPEEEKKDAKKK---GMSASMVAAM 307
Query: 301 CLQLRE 318
QLR+
Sbjct: 308 QEQLRK 313
>AE014296-661|AAF47774.2| 1144|Drosophila melanogaster CG10840-PB
protein.
Length = 1144
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 121 PPPESLTTSQNQTFKRKLEDDSTSQRKKSLKVEQVSPSVKEKVEKLL*ICGMK*TKVNCM 300
P PE + T + Q + E+ S+ +KK K ++ P ++K K GM + V M
Sbjct: 251 PEPEPVATEEVQPAAEEEEEKSSKNKKKGKKDKKAEPEEEKKDAKKK---GMSASMVAAM 307
Query: 301 CLQLRE 318
QLR+
Sbjct: 308 QEQLRK 313
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,445,372
Number of Sequences: 53049
Number of extensions: 673414
Number of successful extensions: 1980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -