Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30511
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical pr... 89 3e-18
AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotid... 89 3e-18
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 2.8
AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical ... 29 2.8
AC006807-3|AAK84617.1| 883|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical p... 29 3.7
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 29 3.7
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 29 3.7
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF101319-5|AAC69356.2| 530|Caenorhabditis elegans Hypothetical ... 29 3.7
AL110485-12|CAE18012.1| 227|Caenorhabditis elegans Hypothetical... 28 6.5
Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical
protein F21D5.5 protein.
Length = 407
Score = 89.0 bits (211), Expect = 3e-18
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +3
Query: 270 WDEIDKGELYVFTAKGVKSSDKIASFDMDGTLIKTKSGKVHPVDINDWQIAFPSVPQKLK 449
W+ D G+L +FT + +KIA+FDMDGTLIKTKSGKV P + DWQ+ + S+P K
Sbjct: 31 WESKDNGDLMIFTHSECEGKEKIAAFDMDGTLIKTKSGKVFPTNCQDWQLLYDSIPSDFK 90
Query: 450 EFLEKDYKIVLFSNQAPI 503
+ +KIV+F+NQ I
Sbjct: 91 KLHSDGFKIVIFTNQKGI 108
Score = 81.0 bits (191), Expect = 9e-16
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +2
Query: 509 GRVKIEDFKKKIESIVQKLNVPVQAYIATGKGIYRKPRIGMWMILTEKKNDGVKVDMNQS 688
G+V +F+KKIE+IV KL +PVQA+++ G YRKP +GMW L + +ND V+++ +S
Sbjct: 111 GKVDRNEFRKKIEAIVGKLGIPVQAFVSVAGGHYRKPCVGMWNEL-KLRNDEVEINEKES 169
Query: 689 FYCGDAAGRVANWAPGKKKDHSLETLF 769
+ GDAAGR+ KKDHS F
Sbjct: 170 IFVGDAAGRIKT-TSRPKKDHSYADRF 195
>AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotide
kinase 3' phosphataseprotein.
Length = 407
Score = 89.0 bits (211), Expect = 3e-18
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +3
Query: 270 WDEIDKGELYVFTAKGVKSSDKIASFDMDGTLIKTKSGKVHPVDINDWQIAFPSVPQKLK 449
W+ D G+L +FT + +KIA+FDMDGTLIKTKSGKV P + DWQ+ + S+P K
Sbjct: 31 WESKDNGDLMIFTHSECEGKEKIAAFDMDGTLIKTKSGKVFPTNCQDWQLLYDSIPSDFK 90
Query: 450 EFLEKDYKIVLFSNQAPI 503
+ +KIV+F+NQ I
Sbjct: 91 KLHSDGFKIVIFTNQKGI 108
Score = 81.0 bits (191), Expect = 9e-16
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +2
Query: 509 GRVKIEDFKKKIESIVQKLNVPVQAYIATGKGIYRKPRIGMWMILTEKKNDGVKVDMNQS 688
G+V +F+KKIE+IV KL +PVQA+++ G YRKP +GMW L + +ND V+++ +S
Sbjct: 111 GKVDRNEFRKKIEAIVGKLGIPVQAFVSVAGGHYRKPCVGMWNEL-KLRNDEVEINEKES 169
Query: 689 FYCGDAAGRVANWAPGKKKDHSLETLF 769
+ GDAAGR+ KKDHS F
Sbjct: 170 IFVGDAAGRIKT-TSRPKKDHSYADRF 195
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 64 HGSTIEILLNNHVHILEFDPPPESLTTSQNQTFKRK----LEDDSTSQRKKSLKVEQVSP 231
HG + L N +H LE D E S+ + KRK LED +K KVE+++
Sbjct: 1023 HGVKAKGRLENQLHELEQDLNRERQYKSELEQHKRKLLAELEDSKDHLAEKMGKVEELNN 1082
Query: 232 SVKEKVEKL 258
+ ++ E+L
Sbjct: 1083 QLMKRDEEL 1091
>AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical
protein Y58A7A.4 protein.
Length = 904
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 177 R*QYISEKEIIKSGT-SVTKCKRKS*KVIIDMWDEIDKGELYVFTAKGVKSSDKIASFDM 353
R Q + KE+ K+ S ++ R++ KV ++ +D++D+ E + V S FD+
Sbjct: 230 RSQDVVGKEMFKAKVVSKSRRHRQNKKVDMENYDDLDE-EFEDDEDEVVDSHRPTGVFDL 288
Query: 354 DGTLIKTKSGKVHPVDINDWQIAFPSV 434
++T+S + HP + D ++++ V
Sbjct: 289 AAFKVRTQSKQAHPKNRKDSELSYDMV 315
>AC006807-3|AAK84617.1| 883|Caenorhabditis elegans Hypothetical
protein Y58A7A.3 protein.
Length = 883
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 177 R*QYISEKEIIKSGT-SVTKCKRKS*KVIIDMWDEIDKGELYVFTAKGVKSSDKIASFDM 353
R Q + KE+ K+ S ++ R++ KV ++ +D++D+ E + V S FD+
Sbjct: 211 RSQDVVGKEMFKAKVVSKSRRHRQNKKVDMENYDDLDE-EFEDDEDEVVDSHRPTGVFDL 269
Query: 354 DGTLIKTKSGKVHPVDINDWQIAFPSV 434
++T+S + HP + D ++++ V
Sbjct: 270 AAFKVRTQSKQAHPKNRKDSELSYDMV 296
>Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = -3
Query: 428 RKCYLPVIYVHRMNFTRLCLD*GSIHIKRCYFVTRFHSLSCKHIQFTFVYFIPHIYNNFS 249
R ++ YV ++F L + C+FV F L+ I FT + IPH +F
Sbjct: 255 RLVFVVFFYVAFVSFGMFALAFDLVSSAYCHFVENFLFLNPYPICFTAMLTIPHWRKHFQ 314
Query: 248 TFSFT 234
FT
Sbjct: 315 NACFT 319
>Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = -3
Query: 428 RKCYLPVIYVHRMNFTRLCLD*GSIHIKRCYFVTRFHSLSCKHIQFTFVYFIPHIYNNFS 249
R ++ YV ++F L + C+FV F L+ I FT + IPH +F
Sbjct: 255 RLVFVVFFYVAFVSFGMFALAFDLVSSAYCHFVENFLFLNPYPICFTAMLTIPHWRKHFQ 314
Query: 248 TFSFT 234
FT
Sbjct: 315 NACFT 319
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 106 ILEFDPPPESLTTSQNQTFKRKLEDDSTSQRKKS-LKVEQVSPSVKEKV 249
I F+PP S ++S + E+D S+R S + +E+V KE++
Sbjct: 16 ISSFEPPSSSSSSSDEDSDDEYREEDGNSERSNSKVCIEEVEEVEKEEI 64
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 121 PPPESLTTSQNQTFKRKLEDDSTSQRKKSLKVEQVSPSVKEKVEKLL*IC 270
P E T S+ +RK+E ++ S+ +LK PS++ IC
Sbjct: 32 PEVEDCTFSEKNNDQRKIEKETESEESSNLKFPPARPSIRNATNFRRIIC 81
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 121 PPPESLTTSQNQTFKRKLEDDSTSQRKKSLKVEQVSPSVKEKVEKLL*IC 270
P E T S+ +RK+E ++ S+ +LK PS++ IC
Sbjct: 32 PEVEDCTFSEKNNDQRKIEKETESEESSNLKFPPARPSIRNATNFRRIIC 81
>AF101319-5|AAC69356.2| 530|Caenorhabditis elegans Hypothetical
protein K08D9.6 protein.
Length = 530
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 752 SDLSFYQGPSLPPFLQHLHNKNF 684
SD +Y GP + PF H N +F
Sbjct: 499 SDAEYYSGPHMVPFTYHFSNNSF 521
>AL110485-12|CAE18012.1| 227|Caenorhabditis elegans Hypothetical
protein Y46G5A.35 protein.
Length = 227
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +2
Query: 143 PH--RIRHSKGNWKMTVHL-RERNH*KW 217
PH R+R+ K +W +HL RER KW
Sbjct: 53 PHMKRLRYEKSHWDDAIHLYREREQRKW 80
>Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical
protein M195.4 protein.
Length = 142
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 160 FKRKLEDDSTSQRKKSLKVEQVSPSVKEKVEKL 258
++ K ++D T ++ +SLKVEQ + K + +KL
Sbjct: 101 YQEKSDEDDTLEKIESLKVEQSDKTKKSQKKKL 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,644,306
Number of Sequences: 27780
Number of extensions: 373375
Number of successful extensions: 1150
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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