Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30510
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 31 0.13
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 29 0.52
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 29 0.69
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 0.69
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 28 1.6
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 28 1.6
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 27 2.1
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 27 2.8
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 3.7
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 27 3.7
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 26 4.9
SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit L37|... 26 4.9
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 4.9
SPAC1250.02 |mug95||sequence orphan|Schizosaccharomyces pombe|ch... 26 4.9
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 26 4.9
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 26 6.4
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 6.4
SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor |Schizosacc... 26 6.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 8.5
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 25 8.5
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 25 8.5
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 25 8.5
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 31.5 bits (68), Expect = 0.13
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 27 NGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEE 206
N ++S P K + + + SP+ R+KP +K KI E + + P++ E
Sbjct: 1227 NRRQSGKPNVKSAQKIESATRTPSPAISESRKKPSSKDTKIETPSREQSRSQTASPVKSE 1286
Query: 207 KPSWVTNRNL--KKVTSERGVSVRKKLSRKNRNT 302
K + N K E VRK + R +++
Sbjct: 1287 KDDGNVSLNAEQKARCKELMYPVRKHMKRLRKDS 1320
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 29.5 bits (63), Expect = 0.52
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 129 DTKKEKIIKTVYEVEKKIS--PKPIQEEKPSWVTNRNLKKVTS 251
D + ++T+YE+ +K+S K I EE N+ ++K++S
Sbjct: 401 DRHVSEYVRTIYELRQKVSILQKRIAEESKQLALNKEVRKISS 443
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 29.1 bits (62), Expect = 0.69
Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 113 QTTEARY*KRKD-NKNSL*SRKEDFT*TNTGGEALV---GDQQEFK-EGDVRTRSFSSKK 277
Q T+++ K+++ +K +L K+ ++ G + L D+ F+ G+V+ ++ S
Sbjct: 87 QNTDSQKEKKQNKSKEALADAKDPLDESSNGIKNLSLNKNDEPAFQTNGEVKMKNSSESD 146
Query: 278 IEPEKPKYRAPSPSKVISKP 337
+PEK K + +P+ ++S P
Sbjct: 147 NQPEKKKIKKQNPTDLVSVP 166
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.69
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +3
Query: 48 PGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPS---W 218
PG+ + Q T +++ S + K ++K+EKI + + + ISP Q + P
Sbjct: 152 PGEPEVKQETNLQKEKKES----KVKLESKEEKISRNLRSSSRSISPVTEQPQSPKIQPV 207
Query: 219 VTNRNLKKVTSERGVSVRKK-LSRKNRNT 302
+ + K E +++RK+ +S ++NT
Sbjct: 208 IPEKKEKSEKKESSMTLRKRSVSPSSQNT 236
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/83 (22%), Positives = 35/83 (42%)
Frame = +3
Query: 48 PGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTN 227
P K ++ ++ S + L +QK + +I +YE +++ P +
Sbjct: 105 PAKAENDEKVPSDAIEALETQLTQQKSEKHNSSVINFIYEKNERLWSDPFVSSQRLRKQF 164
Query: 228 RNLKKVTSERGVSVRKKLSRKNR 296
R KK+ ++ K LS KNR
Sbjct: 165 RERKKIEKKQEA---KDLSLKNR 184
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 27.9 bits (59), Expect = 1.6
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +3
Query: 42 PSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIK-TVYEVEKKISPKPIQEEKPSW 218
P P K S ++T S E R + Q + K+ ++ V + KK+ EK +W
Sbjct: 153 PPPRKMTSSEKTRS-ENRERKKRWREQNEERNKDNDLRCRVNKKAKKLFGSEPSIEKTNW 211
Query: 219 V----TNRNLKKVTSERGVSVRKKLSRKNR 296
+ T R+ K+ ER + + S +R
Sbjct: 212 IEAEFTRRHTKRKEKERACLSQNQSSNASR 241
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 27.5 bits (58), Expect = 2.1
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
Frame = +3
Query: 6 VIETTNFNGKRSPSPGKKQSPQRT--GSFEKRSPSPDLKRQKPDTKKE----KIIKTVYE 167
V E ++ N P KK QR G F K + K KPDT+ + K K
Sbjct: 464 VPEFSDENVINQTGPAKKTPVQRRKDGKFAKSTKRKKQKSLKPDTENQESSVKNKKAKSN 523
Query: 168 VEKKISPK-PIQEEKPSWVTNRNLKKVTSERGVSVRKKLSRKNRNTGLPVP 317
V + SPK PI + + + + + ++ L+ +N T +PVP
Sbjct: 524 VNLQYSPKTPICKINDETLKPPTIANIAGHKQMN---HLTSENIETPVPVP 571
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 27.1 bits (57), Expect = 2.8
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Frame = +3
Query: 9 IETTNFNGKRSPSP------GKKQSPQ--RTGSFEKRSPSPDLKRQKPD-TKKEKIIKTV 161
++ T++N P P G ++SP+ R S +R P PD + P + I K
Sbjct: 538 VQPTSYNRTLPPMPEVVAYKGDEESPRVSRNTSLARRKPLPDTESHSPSPSATSSIKKNP 597
Query: 162 YEVEKKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRKKLSRK 290
+ ++ S + Q + + + TS+ + R K S K
Sbjct: 598 SSIFRRFSSRRKQNKSSTSTLQISAPLETSQSPPTPRTKPSHK 640
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 27.1 bits (57), Expect = 2.8
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +3
Query: 3 DVIETTNFNGKRSPSPGKKQSPQRTGSFEKRSPSP-----DLKRQKPDTKKEKIIKTVYE 167
D I+ + +S SP S + + + SP +L++++ K++KI+KT +
Sbjct: 199 DDIDLSGLYETKSSSPPAIHSDEDPSYSDSIARSPVKSAFNLRKRRKGVKEKKILKTYHS 258
Query: 168 VEKKISPKPIQEEKPSWVTNRNLKKVT 248
+K + S N NLK++T
Sbjct: 259 QDKDTASDNDNNTGSSDEENDNLKELT 285
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +3
Query: 54 KKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVT 224
KK+ + S + S + D+ + ++ E EKK +P EE+P+ +T
Sbjct: 197 KKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKIT 253
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 505 ILTAYSTEPEELEKLLQGEGAPPSRIHGL 591
+L ST EEL+ LL GE S++H L
Sbjct: 875 LLGEQSTSAEELDILLGGENRAESKVHTL 903
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 26.2 bits (55), Expect = 4.9
Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 4/90 (4%)
Frame = +3
Query: 9 IETTNFNGKRSPSPGKKQSPQ----RTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEK 176
+++TN NG SP Q T P+P+L + P V
Sbjct: 272 VDSTNVNGSLSPLSNSSSINQVHQNETHGSTISVPNPNLSQMGPSHSSS--------VPS 323
Query: 177 KISPKPIQEEKPSWVTNRNLKKVTSERGVS 266
+SP P Q E PS + ++ G+S
Sbjct: 324 NLSPNPAQNENPSTTSIPSINNQPFPSGLS 353
>SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit
L37|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 257 RSFSSKKIEPEKPKYRAPSPSKVISKPLDVITSSYGPGPL 376
RS+ S ++ P+KP++ + + S TSS PG +
Sbjct: 43 RSYVSSRVSPKKPQHNSDATSSAQKVANKTHTSSVLPGTI 82
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 26.2 bits (55), Expect = 4.9
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +3
Query: 18 TNFNGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPI 197
T K SP+P KK+S + S + + ++ ++ E I+K + + ++ I
Sbjct: 372 TGLYPKESPTPSKKRSKRVLWSLKHIVSPGNREKHSLNSTPESIMKKDTKWPQNLAKNNI 431
Query: 198 QEEKPSWVTNRNLK--KVTSERGVSVRKKL 281
E P+ T N+ K S R RK +
Sbjct: 432 NSE-PNTPTKSNIDTGKAHSARAHKTRKNI 460
>SPAC1250.02 |mug95||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 178
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 90 KRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEE 206
K P+ +++ P KE KTV E EK + KP+Q E
Sbjct: 59 KSELKPNEEKELPKDIKEDC-KTVEEKEKVVPRKPLQSE 96
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 26.2 bits (55), Expect = 4.9
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 VIETTNFNGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKII-KTVYEVEKKI 182
VI T K P P + P + ++ S S K++ P T K+I + Y V
Sbjct: 316 VIGKTKEPAKPVPQPSSNEPPAPSAENKQPSVSSPEKKESPATHLLKVIGSSPYVVHSNH 375
Query: 183 SPKPIQEEKPSWVTNRNLKKVTSER 257
+ + +++ S T + L + +R
Sbjct: 376 TNNTLTDKESSDPTEKCLYLIEHQR 400
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPK 191
+ ++PSP+L + + K I K++ + K +SP+
Sbjct: 329 DTKTPSPNLSSEIIENTKADIKKSIRSLNKAVSPE 363
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 127 GFCRLRSGLGDRFSKLPVRCGLC 59
G CR+ GLGD + CGLC
Sbjct: 230 GICRIGRGLGDDYFHCKT-CGLC 251
>SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 539
Score = 25.8 bits (54), Expect = 6.4
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +3
Query: 96 SPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLKKVTSERGVSV 269
S P K + + EK +KT E K P+ + KP +N TSE SV
Sbjct: 476 SEEPVANGIKSEPENEKKLKT--EETSKTDDSPVTDAKPDVTSNGEPSTATSESKDSV 531
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 8.5
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +3
Query: 108 DLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRKKLSR 287
+ KRQ+ KK + + E EKK Q+ + KK+ ++ + R+K++R
Sbjct: 630 EAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAR 689
Query: 288 KNR 296
+ R
Sbjct: 690 EQR 692
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 353 SSYGPGPLDADGKPLFGIKALKKGSSNYQVKGTV 454
S+YG + D LF I+ L+K S + GTV
Sbjct: 413 SAYGGFGFEGDANDLFRIQILEKKSKHATSNGTV 446
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 25.4 bits (53), Expect = 8.5
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEK 176
++S P KK +R KRSPSP ++ + D + E + E EK
Sbjct: 165 EKSSVPNKKHKAER-----KRSPSPKIEILEDDEEIEDVASDKDEEEK 207
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 25.4 bits (53), Expect = 8.5
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 583 HGLAAITTTRKFGGDTGTSIHEAHGNEQRAVLDQ 684
HGLAAI T FG T I +G ++R VL Q
Sbjct: 943 HGLAAIIYTMLFGQYIETRIEVING-QRRQVLTQ 975
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,090,738
Number of Sequences: 5004
Number of extensions: 67074
Number of successful extensions: 255
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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