Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30510
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028... 35 0.078
06_01_1159 - 9852316-9852441,9852743-9852838,9852912-9852977,985... 35 0.078
05_03_0040 - 7646525-7647775 32 0.55
11_06_0414 - 23247896-23248654,23249400-23249879,23251924-232520... 31 0.72
01_03_0254 - 14276308-14276313,14277101-14277277,14278290-14278688 31 0.95
04_03_0768 - 19396146-19396607,19397855-19398175,19398424-193995... 31 1.3
01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 30 2.2
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 29 2.9
05_03_0039 - 7621613-7622695 29 2.9
07_03_0182 - 14815467-14815488,14815604-14815943,14816860-148172... 29 3.9
07_03_0089 - 13300902-13301645 29 3.9
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 29 3.9
05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718 29 5.1
02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810 29 5.1
01_01_0045 - 330630-331274 29 5.1
10_07_0134 + 13289641-13290216,13290435-13290914 28 6.7
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 28 6.7
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 28 6.7
03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251... 28 6.7
01_01_0561 + 4122751-4123140,4124226-4124484,4124639-4124985 28 6.7
12_01_1035 + 10656345-10656347,10656694-10656864,10656922-106577... 28 8.9
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 28 8.9
08_02_0154 - 13324384-13325351,13326306-13326502,13326695-133272... 28 8.9
08_02_0151 - 13287964-13288661,13289616-13289812,13290005-132905... 28 8.9
08_02_0146 - 13195691-13196658,13197613-13197809,13198002-131984... 28 8.9
05_03_0033 - 7585267-7586028 28 8.9
>07_03_1180 -
24601631-24602142,24602518-24602581,24602811-24602876,
24602949-24603070,24603170-24603344,24603466-24603701,
24603781-24604129,24605009-24605146,24605242-24605289
Length = 569
Score = 34.7 bits (76), Expect = 0.078
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 96 SPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRK 275
+P+P + + KP K + K VEK +S P++ + T+ N K V E+G SV
Sbjct: 265 TPTPPVAKPKPKPKPKPTAKVTDNVEKAVS-SPVKPTNAADTTSPNDKNVLVEQGYSVYV 323
Query: 276 K 278
K
Sbjct: 324 K 324
>06_01_1159 -
9852316-9852441,9852743-9852838,9852912-9852977,
9853091-9853180,9853262-9853373,9853515-9853598,
9853864-9853940,9854823-9854873,9854924-9855031,
9855703-9855774,9856952-9857011,9857808-9857876,
9858005-9858088,9858212-9858295,9859106-9859198,
9859930-9860030,9861155-9861264,9863058-9863104,
9863693-9863778,9863940-9864012,9864454-9864540,
9864650-9865301,9866164-9867182,9867702-9867797
Length = 1180
Score = 34.7 bits (76), Expect = 0.078
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +3
Query: 12 ETTNFNGKRSPS-PGKKQSPQRTGS--FEKRSPSPDLKRQKPDTKKE-KIIKTVYEVEKK 179
E + KRS S G K++ R S K+ S D+K +K TKK+ K +KT K
Sbjct: 163 EASTSTSKRSKSGTGTKKTTTRRKSPTSRKKEASEDMKEEKASTKKQRKSVKTSTAATKS 222
Query: 180 ISPKPIQEEKPSWVT-NRNLKKVTSERGVSVRKKLSRKNRNT 302
QEE S ++ ++ + E+ S R K S K + +
Sbjct: 223 RKIGVNQEESKSDISKSKKAADSSKEKKTSSRSKKSSKAKES 264
>05_03_0040 - 7646525-7647775
Length = 416
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 42 PSPGKKQSPQRTGSFE-KRSPSPDLKRQ-KPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
P P K P+ E K P P+ K + KP+ K E K E + K PKP E KP
Sbjct: 186 PKPEPKPEPKPHPEPEPKPEPKPEPKPEPKPEPKPEPKPKPKPEPKPKPEPKPYPEPKP 244
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 42 PSPGKKQSPQRTGSFE-KRSPSPDLKRQ-KPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
P P K P+ E K P P+ K + KP+ K E K + E K PKP E KP
Sbjct: 278 PKPEPKPHPKPEPKPEPKPEPKPEPKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPEPKP 336
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 PSPGKKQSPQRTGSFEKRSPSPDLKRQ-KPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
P P K P+ E + P P+ K + KP+ K E K + E K PKP E KP
Sbjct: 88 PKPEPKPEPKPEPKPEPK-PYPEPKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPEPKP 144
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLK---RQKPDTKKEKIIKTVYEVEKKISPKPIQE 203
K P P K P+ K P P+ K KP+ K E + E + K PKP E
Sbjct: 111 KPEPKPEPKPEPEPKPE-PKPEPKPEPKPYPEPKPEPKPEPKPEPKPEPKPKPEPKPHPE 169
Query: 204 EKP 212
KP
Sbjct: 170 PKP 172
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQ-KPDTKKEKIIKTVYEVEKKISPKPIQEEK 209
K P P K P+ + + P P+ K + KP+ K E K + E K PKP + K
Sbjct: 223 KPKPKPEPKPKPE-PKPYPEPKPKPEPKPEPKPEPKPEP--KPEPKPEPKPEPKPEPKPK 279
Query: 210 P 212
P
Sbjct: 280 P 280
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLK---RQKPDTKKEKIIKTVYEVEKKISPKPIQE 203
K P P K P+ K P P+ K KPD K E + E K P+P E
Sbjct: 303 KPEPKPEPKPEPEPKPE-PKPEPKPEPKPYPEPKPDPKPEPKPHPEPKPEPKPQPEPKPE 361
Query: 204 EKP 212
KP
Sbjct: 362 PKP 364
>11_06_0414 -
23247896-23248654,23249400-23249879,23251924-23252091,
23252223-23252231
Length = 471
Score = 31.5 bits (68), Expect = 0.72
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +3
Query: 3 DVIETTNFNGKRSPSPGKKQSPQRTGSFEKRSPSPD---LKRQKPD--TKKEKIIKTVYE 167
D+ T + + PSP + P++T E++ PSP+ L RQ D +KE+ KT E
Sbjct: 13 DLPRETEDSERIIPSPDVEYLPRQTEDTERKLPSPEVDYLSRQNEDILEQKEEHGKTT-E 71
Query: 168 VEKKISPKPIQEEK 209
+E+K K ++EE+
Sbjct: 72 LERK--EKQLKEER 83
>01_03_0254 - 14276308-14276313,14277101-14277277,14278290-14278688
Length = 193
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 12 ETTNFNGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQ 122
E +GK SPG++ P+ T + E+ PSP L R+
Sbjct: 32 EEARGDGKGRNSPGRRWPPEETTAGEESVPSPSLSRR 68
>04_03_0768 -
19396146-19396607,19397855-19398175,19398424-19399569,
19400073-19400855,19402114-19402149
Length = 915
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/74 (22%), Positives = 39/74 (52%)
Frame = +3
Query: 45 SPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVT 224
S G G+ K P+ +K PDTK+++ ++ + E+ KK + + +++ +
Sbjct: 590 SSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLELLEELRKK--QEILAQKRDEF-- 645
Query: 225 NRNLKKVTSERGVS 266
R L+K+ ++G++
Sbjct: 646 RRQLEKLAKQKGLA 659
>01_04_0003 -
14989160-14989445,14989673-14989807,14991418-14991508,
14991571-14991712,14991924-14992403,14992610-14993548
Length = 690
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +3
Query: 3 DVIETTN---FNGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVE 173
DV+E N NG +PS P+ + EK +PSPD P + + + +
Sbjct: 248 DVMEHENPGTKNGMLTPSNQWDSPPESSARLEKGTPSPDRMVSLPVGRSPR----THSPK 303
Query: 174 KKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRKKLSRKNRNTGLPVPLK 323
+ SP+P + EK + +++T ER +S+++K K GLP+ K
Sbjct: 304 ELDSPRP-ENEKKGFAQE---ERLTKER-LSIKEKGLTKE---GLPIKEK 345
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKP--DTKKEKIIKTVYEVEKKISPKPIQEE 206
K S S + + P+ + ++ P K KP D+K++K K V E +KK + K +E+
Sbjct: 172 KDSKSSKESKEPKPSKDSKQLKPPKVSKESKPLKDSKEDK--KAVKE-DKKAAAKDSKEQ 228
Query: 207 KPSWVTNRNLKKVTSE 254
K + ++ LKK +
Sbjct: 229 KKALKDSKELKKALKD 244
>05_03_0039 - 7621613-7622695
Length = 360
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +3
Query: 42 PSPGKKQSPQRTGSFEKR---SPSPDLKRQ-KPDTKKEKIIKTVYEVEKKISPKPIQEEK 209
P P K P+ E + P P LK + KP+ K E K + E K PKP + K
Sbjct: 208 PKPEPKPEPKLHPKPEPKPHPEPEPKLKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPKPK 267
Query: 210 P 212
P
Sbjct: 268 P 268
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
K P PG K P K P P KP+ K + + + E K PKP E KP
Sbjct: 159 KPEPKPGPKPEP-------KPEPKPH-PEPKPEPKPKPVPHPEPKPEPKPEPKPHPEPKP 210
>07_03_0182 -
14815467-14815488,14815604-14815943,14816860-14817220,
14817232-14817666,14818042-14818149
Length = 421
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 179 DFT*TNTGGEALVGDQQEFKEGDVRTRSFSSKKIEPEKPKYRAPSPSKVISKPLDVITSS 358
+ T T GG+ + QE K T + + + ++ P P+K +S P +
Sbjct: 129 EMTTTTRGGK----EAQEKKPSASATIAKAQPQPHDQETATAPPQPTKSLSAPFKFKIAL 184
Query: 359 YGPGPLDADGKP 394
GP P D + KP
Sbjct: 185 QGPAPADQEKKP 196
>07_03_0089 - 13300902-13301645
Length = 247
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFE-KRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEK 209
K +P P KQ PQ + K +P PD K Q P + K + K +PKP + +
Sbjct: 129 KPTPQPNPKQDPQPNPQPDPKPTPQPDPK-QDPQPNPQPSPK----ADPKPNPKPKPQPE 183
Query: 210 PS 215
PS
Sbjct: 184 PS 185
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 63 SPQRTGSFE--KRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPK 191
SP+R F + +P P L+R+K + +K K K V E + +PK
Sbjct: 126 SPERHDPFAAGEATPDPSLRRKKEEEEKAKEKKAVPEQQPVAAPK 170
>05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718
Length = 756
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 269 SKKIEPEKPKYRAPSPSKVISKP 337
SKK+ EKPK APSP + KP
Sbjct: 732 SKKVWKEKPKTLAPSPPETGGKP 754
>02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810
Length = 472
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 39 SPSPGKKQSPQRTGSFEKRS-PSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
+P+P + PQ T S + PSP +K +KK+K++K VEK ++ + +EE P
Sbjct: 287 TPTPTPPR-PQGTASNTTAAMPSPPSAPEKKKSKKKKVVK----VEKVMAREKEEEESP 340
>01_01_0045 - 330630-331274
Length = 214
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 12 ETTNFNGKRSPSPGKKQSP----QRTGSFEKRSPSPDLKRQKPDTKKEKIIKTV 161
ET+ N K+ ++++ Q G+ E+R SP+ KR K + +E+ +KTV
Sbjct: 115 ETSKKNRKKKKHESQQENARDVKQNGGAPEQRFASPEKKRNKKNHPEEEEVKTV 168
>10_07_0134 + 13289641-13290216,13290435-13290914
Length = 351
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 352 VELWARTTRCRWKTTLRDKSFEKRKQ*LPSKRHCDTTRVSL 474
V +W + R RWKT +K F+ ++ L + R + +SL
Sbjct: 145 VAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDALLSL 185
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +3
Query: 96 SPSPDLKRQKPDTKKEKII-----KTVYEVEKKISPKPIQEEKPSWVTNRNLKKVTSERG 260
S SPD + K D E I+ K + E K+ K E + ++ KV +
Sbjct: 441 SKSPDKSKMKKDQTDETIVKKSQLKLLKGDESKLPSKDDVEVPQTSTHSKGKAKVGKRQN 500
Query: 261 VSVRKKLSRKNRNTG 305
S+ ++ S+K+R +G
Sbjct: 501 TSIDERPSKKSRESG 515
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 15 TTNFNGKRSPSPG---KKQSPQRTGSFEKRSPSPDLKRQK 125
T N KR P PG KK+ P R + + P+ +R+K
Sbjct: 171 TKNHVAKRKPPPGRKKKKRKPSRVSKAKPKKPTSGRRRRK 210
>03_02_0882 -
12121917-12124446,12124739-12124919,12125057-12125134,
12125731-12125764,12125864-12125975,12126053-12126238,
12126505-12126575
Length = 1063
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +3
Query: 39 SPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTK--KEKIIKTVYEVEKKISPKPIQEEKP 212
+PS + S + ++ + KP K +EK KT + + PI +EK
Sbjct: 698 APSSSQPTSKVERSAQPVKNKKETVAASKPAIKGIEEKKTKTATKTSRLAKSTPISDEKS 757
Query: 213 SWVTNRNLKKVTSERGVSVRKKLSRKNRNTGL 308
S T NL +++ V + + TG+
Sbjct: 758 SAATRPNLYNKVAKKSSVVPLESKPSKKATGI 789
>01_01_0561 + 4122751-4123140,4124226-4124484,4124639-4124985
Length = 331
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Frame = +3
Query: 27 NGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYE----VEKKISPKP 194
N + + +K+ +TG + +PS +K KK K K E E+ S +P
Sbjct: 209 NAAQDENNAEKKGSNQTGDGDAPAPSESKSSKKKKNKKAKEAKESQEPADGTEETASAEP 268
Query: 195 IQEEKPSWVTNRNLKKVTSERGVSVRKKLSRKNRNTGLPV 314
E+ S LKK+ S++KK S K +T +
Sbjct: 269 -DEDTTSVDVKERLKKM-----ASMKKKKSGKESDTAAKI 302
>12_01_1035 +
10656345-10656347,10656694-10656864,10656922-10657728,
10657881-10659092
Length = 730
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 272 KKIEPEKPKYRAPSPSKVISKPLD 343
KK+ EKPK APSP + K +D
Sbjct: 707 KKVWKEKPKMPAPSPPETSGKSVD 730
>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
Length = 1357
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 108 DLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRKKLSR 287
D + K D +K K + ++ EV K++ + + EKP ++ +++ + +RK+L R
Sbjct: 605 DKDKLKKDIQKSKFL-SIDEVFKRLDEQKKKNEKPDLISLFEDQRIMKQDLEEIRKRLYR 663
Query: 288 KNRNTG 305
G
Sbjct: 664 LESKEG 669
>08_02_0154 -
13324384-13325351,13326306-13326502,13326695-13327274,
13328324-13328446,13328803-13329130
Length = 731
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 272 KKIEPEKPKYRAPSPSKVISKP 337
KK+ EKPK APSP + I P
Sbjct: 382 KKVWREKPKTPAPSPPETIENP 403
>08_02_0151 -
13287964-13288661,13289616-13289812,13290005-13290523,
13290912-13291114
Length = 538
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 272 KKIEPEKPKYRAPSPSKVISKP 337
KK+ EKPK APSP + I P
Sbjct: 279 KKVWREKPKTPAPSPPETIENP 300
>08_02_0146 -
13195691-13196658,13197613-13197809,13198002-13198479,
13199660-13199782,13200139-13200466
Length = 697
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 272 KKIEPEKPKYRAPSPSKVISKP 337
KK+ EKPK APSP + I P
Sbjct: 348 KKVWREKPKTPAPSPPETIENP 369
>05_03_0033 - 7585267-7586028
Length = 253
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKP 194
K P K P+ E + + KP+ + + KT + E K PKP
Sbjct: 186 KAESQPEPKTEPKSESKAEPKPERKSYSKSKPEPESKPEAKTEPQPESKPEPKP 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,227,992
Number of Sequences: 37544
Number of extensions: 493381
Number of successful extensions: 1781
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1769
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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