Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30510
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-1|CAA94597.1| 580|Caenorhabditis elegans Hypothetical pr... 36 0.030
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical pr... 34 0.091
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 33 0.16
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 33 0.21
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 33 0.21
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 33 0.21
Z69634-6|CAD01081.2| 490|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 33 0.28
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.64
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 31 0.64
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 31 0.64
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 31 0.64
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.64
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.64
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.64
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 0.64
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 0.85
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 0.85
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 31 1.1
U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidan... 31 1.1
AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical ... 31 1.1
Z68882-14|CAA93109.1| 366|Caenorhabditis elegans Hypothetical p... 30 1.5
AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical... 30 1.5
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 30 2.0
L23646-14|AAN84801.2| 517|Caenorhabditis elegans C. elegans RET... 30 2.0
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 30 2.0
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 30 2.0
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical... 29 2.6
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 2.6
Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z22173-1|CAA80125.1| 398|Caenorhabditis elegans Hypothetical pr... 29 4.5
U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical pr... 29 4.5
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 4.5
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 28 6.0
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 28 6.0
U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical pr... 28 6.0
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 6.0
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 28 6.0
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 28 6.0
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 28 6.0
AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical ... 28 6.0
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF125451-9|AAD12827.2| 210|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z70684-1|CAA94597.1| 580|Caenorhabditis elegans Hypothetical
protein F28D1.1 protein.
Length = 580
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = +3
Query: 105 PDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRKKLS 284
P +KR KPD +KI T +V +P EEK SW + KK+ G R KL
Sbjct: 2 PPIKRSKPDGGVKKISITATDV----TPAKGVEEKMSW---KEYKKMKQHTGGGTRNKLK 54
Query: 285 RKNR 296
+K R
Sbjct: 55 KKQR 58
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLKKVTSERGVS 266
E P K+ K K+ K K V E EK+ +P+P+ + P W+ +KK +
Sbjct: 547 EPAEDEPKKKKPKKHRKRPKKKKPVVEPEKEPTPEPVVPKAPKWIA--PIKKPEEPIPMP 604
Query: 267 VRKK-LSRKNRNTGLPVPLK 323
++K ++ +N+ +P L+
Sbjct: 605 PKEKTIAERNKEERIPPALR 624
>Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical
protein T15H9.5 protein.
Length = 173
Score = 34.3 bits (75), Expect = 0.091
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEK--------KISP 188
K+ SP KK+SP + S +K + ++PD K EK +K + + KI+
Sbjct: 62 KKPVSPEKKKSPIKVLSEKKLKSKKKEEDKEPDEKVEKDVKKEVKADNNEPLVKNLKIAK 121
Query: 189 KPIQEEKPSWVTNRNLKKVTSERGVSVR-KKLSRKNRNTG 305
K +EE P + + +++ S R KK+ KN G
Sbjct: 122 KEQEEENPKTDLESHKDEAEAKKKESRRQKKMRNKNSKEG 161
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
+RSPS K +P+R S K P+P +R+ P K + SP + P
Sbjct: 320 RRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSP 379
Query: 213 S 215
S
Sbjct: 380 S 380
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEE-- 206
+R SP +++SP + S RSP P +R + D++++ + KK P +
Sbjct: 495 QRRRSPRRRRSP--SSSSRSRSPPPPPRRPRQDSEQQAPVAVKSPEMKKRRPNDTDSDVS 552
Query: 207 -KPSWVTNRNLKKVTSERGVSVRKKLSRKNR 296
R KK E+ + + K +K++
Sbjct: 553 VDSEAEEERRRKKAKKEKKAAKKHKKEKKSK 583
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 33 KRSPSPGKK-QSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPK-PIQEE 206
+RSPS K +P+R S K P+P +R+ P K + K SP+ P +
Sbjct: 412 RRSPSASKSPPAPKRAKSRSKSPPAP-RRRRSPSQSKSPAPRRRRSPSK--SPQAPRRRR 468
Query: 207 KPSWVTNRNLKKVTSERGVSVRKKLSRKNRN 299
PS +R+ ++ S R++ ++ R+
Sbjct: 469 SPSGSKSRSPRRRRSPAAAPRRRQSPQRRRS 499
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/81 (32%), Positives = 41/81 (50%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
KRS S + S +R +RSPSP +R++P K K ++ E+ SPK +EE
Sbjct: 136 KRSSSSSDESSDERVERKRRRSPSPK-RRRRPSEKPRKRSRSPRR-ERPRSPKRSREE-- 191
Query: 213 SWVTNRNLKKVTSERGVSVRK 275
+ + +K +S R S R+
Sbjct: 192 ---SRKLSRKPSSSRSKSPRR 209
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/81 (32%), Positives = 41/81 (50%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
KRS S + S +R +RSPSP +R++P K K ++ E+ SPK +EE
Sbjct: 136 KRSSSSSDESSDERVERKRRRSPSPK-RRRRPSEKPRKRSRSPRR-ERPRSPKRSREE-- 191
Query: 213 SWVTNRNLKKVTSERGVSVRK 275
+ + +K +S R S R+
Sbjct: 192 ---SRKLSRKPSSSRSKSPRR 209
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
+RSPS +++SPQR +R S + +R+ T +K + E+E K P E+
Sbjct: 317 QRSPSVERRKSPQRRDERRRRHDSSENERRSTATASKK--SRMDELEVKQEPPSDSED-- 372
Query: 213 SWVTNRNLKKVTSERGVSVRKKLSRKN 293
++ NL + E+ +K SRK+
Sbjct: 373 -YIAKTNLAPIRVEKSAEKVEK-SRKS 397
>Z69634-6|CAD01081.2| 490|Caenorhabditis elegans Hypothetical
protein B0001.8 protein.
Length = 490
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/88 (23%), Positives = 37/88 (42%)
Frame = +3
Query: 36 RSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPS 215
R+P+ + S F + +P L+ QKP KKE+ + + + S + + P
Sbjct: 312 RAPTTDSEDSDDDAAGFNRTKETPILRDQKPTAKKERPVSPKSSSDSEDSDASFRSKLPP 371
Query: 216 WVTNRNLKKVTSERGVSVRKKLSRKNRN 299
+ K T+ SV+ S+ RN
Sbjct: 372 HFFAKT-KAKTASGASSVKSFASQDTRN 398
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 42 PSPGKKQSPQRTGSF--EKRSPSPDLKRQKPDTKKEK 146
PSP +K +P RT EK+ P +K QK KKEK
Sbjct: 171 PSPPRKPAPARTAPIVVEKKIEKPAVKEQKARKKKEK 207
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.5 bits (68), Expect = 0.64
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Frame = +3
Query: 33 KRSPSPGKKQ-SPQRT----GSFEKRS----PSPDLKRQKPDTKKEKI-----IKTVYEV 170
K+SPSP KK+ SP++T S K++ SP K TKKEK +K+ +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKK 1433
Query: 171 EKKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRKKLSRKNRNTGLPVPLKS 326
EK S +E+ PS T + +V + S K ++K ++ P +KS
Sbjct: 1434 EKSPSSPTKKEKSPSSPTKKTGDEVKEK---SPPKSPTKKEKSPEKPEDVKS 1482
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Frame = +3
Query: 33 KRSPSPGKKQ-SPQRTGSFEKRSP---SPDLKRQKPD--TKKEKI-IKTVYE-----VEK 176
++ SP KK+ SP+++ E +SP SP+ +KP TKKEK K+ E +K
Sbjct: 1699 EKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKK 1758
Query: 177 KISPKPIQEEKPSWVTNRNLKKV 245
+ SP+ EEKP T + V
Sbjct: 1759 EKSPEKSAEEKPKSPTKKESSPV 1781
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKI-SPKPIQEEKPSWVTNRNLKKVTSERGV 263
+K+SPSPD K + P+ +EK + +++ SPK E+ P+ T + K +E
Sbjct: 1373 KKKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPK---EKSPASPTKKE-KSPAAEEVK 1428
Query: 264 SVRKK 278
S KK
Sbjct: 1429 SPTKK 1433
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 12 ETTNFNGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQ-KPDTKKEKIIKTVYEVEKKISP 188
E + + K+ +P K ++ + + +SP + + K KKEK + V E +
Sbjct: 1520 EESRTSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTK 1579
Query: 189 KPIQEEKPSWVTNRNLKKVTS 251
K EKP+ T ++ +V S
Sbjct: 1580 KEKSPEKPASPTKKSENEVKS 1600
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +3
Query: 492 PKAPYPHSLFH*ARGARETSTGRRSSSIQDTWPGGHHHDQEVWWRHRYFYSRSTRE*TAR 671
P P+P S H +RG R + + GGHHH Q H +T +
Sbjct: 22 PHPPHPTS-HHNSRGGRGGRPSMKPYTSGGGRGGGHHHSQHHHHNHNQLQKSATIGHIDK 80
Query: 672 SPRSVHPERQ 701
PR H + Q
Sbjct: 81 VPRGDHGDHQ 90
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +3
Query: 492 PKAPYPHSLFH*ARGARETSTGRRSSSIQDTWPGGHHHDQEVWWRHRYFYSRSTRE*TAR 671
P P+P S H +RG R + + GGHHH Q H +T +
Sbjct: 526 PHPPHPTS-HHNSRGGRGGRPSMKPYTSGGGRGGGHHHSQHHHHNHNQLQKSATIGHIDK 584
Query: 672 SPRSVHPERQ 701
PR H + Q
Sbjct: 585 VPRGDHGDHQ 594
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = +3
Query: 9 IETTNFNGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISP 188
+ T + +P+P +K+S + + EK+ P+ + + KKE V E +K+ +P
Sbjct: 120 VVTEEKKSEEAPAPEEKKSEEVVAAEEKKEPAAVV-----EEKKEVPETPVVEDKKEEAP 174
Query: 189 KPIQEEKPSWVTNRNLKKVTSE 254
+E+K V N KK +E
Sbjct: 175 ASSEEKKDEPVVNTEEKKDAAE 196
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.5 bits (68), Expect = 0.64
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Frame = +3
Query: 33 KRSPSPGKKQ-SPQRT----GSFEKRS----PSPDLKRQKPDTKKEKI-----IKTVYEV 170
K+SPSP KK+ SP++T S K++ SP K TKKEK +K+ +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKK 1433
Query: 171 EKKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRKKLSRKNRNTGLPVPLKS 326
EK S +E+ PS T + +V + S K ++K ++ P +KS
Sbjct: 1434 EKSPSSPTKKEKSPSSPTKKTGDEVKEK---SPPKSPTKKEKSPEKPEDVKS 1482
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Frame = +3
Query: 33 KRSPSPGKKQ-SPQRTGSFEKRSP---SPDLKRQKPD--TKKEKI-IKTVYE-----VEK 176
++ SP KK+ SP+++ E +SP SP+ +KP TKKEK K+ E +K
Sbjct: 1699 EKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKK 1758
Query: 177 KISPKPIQEEKPSWVTNRNLKKV 245
+ SP+ EEKP T + V
Sbjct: 1759 EKSPEKSAEEKPKSPTKKESSPV 1781
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKI-SPKPIQEEKPSWVTNRNLKKVTSERGV 263
+K+SPSPD K + P+ +EK + +++ SPK E+ P+ T + K +E
Sbjct: 1373 KKKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPK---EKSPASPTKKE-KSPAAEEVK 1428
Query: 264 SVRKK 278
S KK
Sbjct: 1429 SPTKK 1433
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 12 ETTNFNGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQ-KPDTKKEKIIKTVYEVEKKISP 188
E + + K+ +P K ++ + + +SP + + K KKEK + V E +
Sbjct: 1520 EESRTSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTK 1579
Query: 189 KPIQEEKPSWVTNRNLKKVTS 251
K EKP+ T ++ +V S
Sbjct: 1580 KEKSPEKPASPTKKSENEVKS 1600
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.5 bits (68), Expect = 0.64
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Frame = +3
Query: 33 KRSPSPGKKQ-SPQRT----GSFEKRS----PSPDLKRQKPDTKKEKI-----IKTVYEV 170
K+SPSP KK+ SP++T S K++ SP K TKKEK +K+ +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKK 1433
Query: 171 EKKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRKKLSRKNRNTGLPVPLKS 326
EK S +E+ PS T + +V + S K ++K ++ P +KS
Sbjct: 1434 EKSPSSPTKKEKSPSSPTKKTGDEVKEK---SPPKSPTKKEKSPEKPEDVKS 1482
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Frame = +3
Query: 33 KRSPSPGKKQ-SPQRTGSFEKRSP---SPDLKRQKPD--TKKEKI-IKTVYE-----VEK 176
++ SP KK+ SP+++ E +SP SP+ +KP TKKEK K+ E +K
Sbjct: 1699 EKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKK 1758
Query: 177 KISPKPIQEEKPSWVTNRNLKKV 245
+ SP+ EEKP T + V
Sbjct: 1759 EKSPEKSAEEKPKSPTKKESSPV 1781
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKI-SPKPIQEEKPSWVTNRNLKKVTSERGV 263
+K+SPSPD K + P+ +EK + +++ SPK E+ P+ T + K +E
Sbjct: 1373 KKKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPK---EKSPASPTKKE-KSPAAEEVK 1428
Query: 264 SVRKK 278
S KK
Sbjct: 1429 SPTKK 1433
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 12 ETTNFNGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQ-KPDTKKEKIIKTVYEVEKKISP 188
E + + K+ +P K ++ + + +SP + + K KKEK + V E +
Sbjct: 1520 EESRTSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTK 1579
Query: 189 KPIQEEKPSWVTNRNLKKVTS 251
K EKP+ T ++ +V S
Sbjct: 1580 KEKSPEKPASPTKKSENEVKS 1600
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.5 bits (68), Expect = 0.64
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Frame = +3
Query: 33 KRSPSPGKKQ-SPQRT----GSFEKRS----PSPDLKRQKPDTKKEKI-----IKTVYEV 170
K+SPSP KK+ SP++T S K++ SP K TKKEK +K+ +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKK 1433
Query: 171 EKKISPKPIQEEKPSWVTNRNLKKVTSERGVSVRKKLSRKNRNTGLPVPLKS 326
EK S +E+ PS T + +V + S K ++K ++ P +KS
Sbjct: 1434 EKSPSSPTKKEKSPSSPTKKTGDEVKEK---SPPKSPTKKEKSPEKPEDVKS 1482
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Frame = +3
Query: 33 KRSPSPGKKQ-SPQRTGSFEKRSP---SPDLKRQKPD--TKKEKI-IKTVYE-----VEK 176
++ SP KK+ SP+++ E +SP SP+ +KP TKKEK K+ E +K
Sbjct: 1699 EKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKK 1758
Query: 177 KISPKPIQEEKPSWVTNRNLKKV 245
+ SP+ EEKP T + V
Sbjct: 1759 EKSPEKSAEEKPKSPTKKESSPV 1781
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKI-SPKPIQEEKPSWVTNRNLKKVTSERGV 263
+K+SPSPD K + P+ +EK + +++ SPK E+ P+ T + K +E
Sbjct: 1373 KKKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKSPK---EKSPASPTKKE-KSPAAEEVK 1428
Query: 264 SVRKK 278
S KK
Sbjct: 1429 SPTKK 1433
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 12 ETTNFNGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQ-KPDTKKEKIIKTVYEVEKKISP 188
E + + K+ +P K ++ + + +SP + + K KKEK + V E +
Sbjct: 1520 EESRTSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTK 1579
Query: 189 KPIQEEKPSWVTNRNLKKVTS 251
K EKP+ T ++ +V S
Sbjct: 1580 KEKSPEKPASPTKKSENEVKS 1600
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLK-RQKPDTKKEKIIKTVYEVEKKISPKPIQEEK 209
K P P K P+ + K P P K + KP+ K + +K+ + + K+ PKP K
Sbjct: 220 KPKPKPKPKPKPKPNPN-PKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPK 278
Query: 210 P 212
P
Sbjct: 279 P 279
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 18 TNFNGKRSPSPGKKQSPQRTGSFEKRSPSPDLK---RQKPDTKKEKIIKTVYEVEKKISP 188
T + P P K P+ E +P P+LK + KP+++ + + + K +P
Sbjct: 257 TKLKSEPKPKPKLKPKPKPNPKPEP-NPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNP 315
Query: 189 KPIQEEKPSWVTNRNLK 239
KP KP N LK
Sbjct: 316 KPKPRPKPELKPNHKLK 332
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 27 NGKRSPSPGKKQSPQ-RTGSFEKRSPSPDLK-RQKPDTKKEKIIKTVYEVEKKISPKPIQ 200
N K P P K P+ + K P P K + KP+ K E K E + K P+P
Sbjct: 162 NPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKP 221
Query: 201 EEKP 212
+ KP
Sbjct: 222 KPKP 225
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
K +P P K P+ K P PD K KP K + K + E K PKP + KP
Sbjct: 160 KPNPKPEPKPKPKPE---PKPKPKPDPK-PKPKPKPKPKPKPNPKPEPKPKPKPEPKPKP 215
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 257 RSFSSKKIEPEKPKYRAPSPSKVISKPLDVITS-SYGPGPLDADG 388
R FSS + P P Y SPS S P TS +Y P P + G
Sbjct: 1771 RGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPG 1815
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 257 RSFSSKKIEPEKPKYRAPSPSKVISKPLDVITS-SYGPGPLDADG 388
R FSS + P P Y SPS S P TS +Y P P + G
Sbjct: 1778 RGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPG 1822
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +3
Query: 39 SPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSW 218
SP +K+ P ++ K SP +K KK+ + +++ K + K ++ E PS
Sbjct: 677 SPKKFEKKPPVKSSPVNK-SPVKSSPIKKEAEKKKGPVASIFSSSTKKNEKDVKVESPSP 735
Query: 219 VTNRNLKKVT--SERGVSVRKKLSRKNRN 299
+ + L + S+ S KK K R+
Sbjct: 736 IRKKKLPSDSDESDEETSTNKKQPAKKRS 764
>U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidance
abnormal protein10 protein.
Length = 419
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 42 PSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVE 173
P K SP RTGS + S +K +K EK++K + V+
Sbjct: 109 PKAKKSPSPSRTGSGDSGSRKESSASRKDSSKTEKLVKDLENVK 152
>AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical
protein Y59H11AM.4 protein.
Length = 185
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 54 KKQSPQRTGSFEKRSPSPDLK---RQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVT 224
K++ P + S EK P K ++K + KKE K V K PK EEK +
Sbjct: 75 KEEVPNKNLSKEKGKPISKEKTGEKEKKEKKKEATQKKQKSVRKTAKPK--NEEKDAEAP 132
Query: 225 NRNLKKVTSERGVSVRKK 278
N K SE G++ K
Sbjct: 133 VENDDKKISEEGINKTDK 150
>Z68882-14|CAA93109.1| 366|Caenorhabditis elegans Hypothetical
protein C47E12.11 protein.
Length = 366
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +3
Query: 75 TGSFEKRSPSPDLKRQKPDTKKEKI----IKTVYEVEKKISPKPIQEEKPSWVTNRNLKK 242
TGS K S S K + D+K K +KT Y ++ E SW ++ K
Sbjct: 297 TGSHSKNSKSSKKKNTQTDSKSTKSKSLSMKTTYSESSQLRDSDSCSEDESWDKQKSKKD 356
Query: 243 VTSERG 260
V ++G
Sbjct: 357 VKKKKG 362
>AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical
protein F36H12.5 protein.
Length = 197
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 275 KIEPEKPKYRAPSPSKVISKPLDVITSSYGPGPLDADGKPLFGIKALKKGS 427
K + +KPK AP+P IS V + P P +A+ KP G + K+ S
Sbjct: 25 KSKAKKPKAAAPNPISSISSNSKVAPPASPPPPPEAEKKPETGEEPKKEKS 75
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 54 KKQSPQRTGSFEKRSPSPDL-KRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNR 230
K + P ++ EK+ S + +++ D +KEK E +K PK +KP
Sbjct: 85 KPEEPAKSKKSEKKEKSKNEGSKKEEDKEKEKEKSNKAEDKKSEDPKKEDAKKPDVKGKD 144
Query: 231 NLKKVTSERGVSVRK 275
KK E V+ +K
Sbjct: 145 TFKKPVDESAVAPKK 159
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +3
Query: 60 QSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLK 239
+S + T + + S D K+ TK+EK+ T ++ S P E+P +
Sbjct: 229 KSSKTTTTTTEASTKKDSKKSHKKTKEEKVTTTPEPSTEESSESPETSEEPQSSESTPTS 288
Query: 240 KVTSERGVSVRKKLSRKNR 296
+ ++E+ KK +K++
Sbjct: 289 EESTEQSTEKPKKEDKKDK 307
>L23646-14|AAN84801.2| 517|Caenorhabditis elegans C. elegans RETR-1
protein, isoformc protein.
Length = 517
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLKKVTSERGVS 266
EKR + DL RQ + +E + K+ VE + K ++EE+ ++ +
Sbjct: 105 EKRETNRDLNRQLKEKSEELMQKSQILVETTLKLKAVEEERDKRKKEEQFREADARSNNY 164
Query: 267 VRKKLSRKNRNTGL 308
RK K N L
Sbjct: 165 ARKDHGYKMHNIEL 178
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 27 NGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIK----TVYEVEKKISPKP 194
+ +R K++ + EK+ + K+QK + +K K +K + E E+K + K
Sbjct: 196 SSRRLQEKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKA 255
Query: 195 IQEEKPSWVTNRNLKKVT 248
++EK + ++ LKK T
Sbjct: 256 EKKEKNNGTMDKFLKKDT 273
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 27 NGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIK----TVYEVEKKISPKP 194
+ +R K++ + EK+ + K+QK + +K K +K + E E+K + K
Sbjct: 232 SSRRLQEKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKA 291
Query: 195 IQEEKPSWVTNRNLKKVT 248
++EK + ++ LKK T
Sbjct: 292 EKKEKNNGTMDKFLKKDT 309
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 27 NGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIK----TVYEVEKKISPKP 194
+ +R K++ + EK+ + K+QK + +K K +K + E E+K + K
Sbjct: 232 SSRRLQEKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKA 291
Query: 195 IQEEKPSWVTNRNLKKVT 248
++EK + ++ LKK T
Sbjct: 292 EKKEKNNGTMDKFLKKDT 309
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 111 LKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLKK 242
++ +K + K +K+ KT ++ EK + KPI KP+ V K+
Sbjct: 293 VEEEKEEKKTKKVEKTTWDWEKVNNVKPIWMRKPNQVEEDEYKQ 336
>AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical
protein Y73F8A.20 protein.
Length = 541
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 39 SPSPGKKQ----SPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEE 206
SP P Q +P+R +R+ +R T+K+++++ V + E+K K +
Sbjct: 415 SPPPKSSQVFINAPERIR--HRRTIITKKRRNTKITRKQRLLRKVRKSEEKEKEKDRKRA 472
Query: 207 KPSWVTNRNLKK 242
K + + N NLKK
Sbjct: 473 KKALIKNSNLKK 484
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKK 179
K S GKK + EK+ D K +K + KKE K + EKK
Sbjct: 74 KSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKK 122
>Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical
protein F40F9.10 protein.
Length = 502
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 54 KKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKI 182
KK++PQ+T EK+ + K++KP KEK K +KK+
Sbjct: 301 KKKTPQKTEKVEKKVVAE--KKKKPADGKEKTDKDAAPKKKKV 341
>Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical
protein C16C10.6 protein.
Length = 392
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = +3
Query: 39 SPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSW 218
SPSP ++S + S +RSP + K EK K ++ K+ PK I +E
Sbjct: 306 SPSPTSRKSIESRESGSRRSP------EGKSEKSEKAPK--ISLKDKLKPKKIDKEARLD 357
Query: 219 VTNRNLKKVTSERGVSVRKKLSRKNRNTGLPVP 317
LK+ +E + ++ + + G+ VP
Sbjct: 358 GLKEILKQRNTEEDIEAARQRYFERKEQGIVVP 390
>Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical
protein F38H4.4 protein.
Length = 501
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 57 KQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWV 221
++S +T EK + D+K +K D KKE K + EKK +E+K W+
Sbjct: 135 QKSKSKTKLDEKSDNNKDIKDEKKDDKKEG-KKEEKKDEKKDDDGNTEEKKQKWL 188
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 54 KKQSPQRTGSFEKRSPSPDLKRQKPDT-KKEKIIKTVYEVEKKISPKPIQEEKPSWVTNR 230
+K + T +K+ K++K K+EKI K V E EKK K ++EK R
Sbjct: 243 EKNKMEMTEKIKKKDEDEKAKKEKERIDKEEKIKKEVEEAEKK---KKEEKEK-----RR 294
Query: 231 NLKKVTSERGVSVRKKLSRKNR 296
K E +S+ ++SR ++
Sbjct: 295 KEVKKNREEQLSINPEMSRNDK 316
>Z22173-1|CAA80125.1| 398|Caenorhabditis elegans Hypothetical
protein C15H7.3 protein.
Length = 398
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 66 PQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPS 215
P +G E + D K +K D KKE+ + E +K+ +P EE+P+
Sbjct: 64 PSSSGQSEGTTRMDDQKDEKKDDKKEEKKEERKEEKKEEVKEPWSEEEPA 113
>U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical
protein F47B3.5 protein.
Length = 199
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 54 KKQSPQRTGSFEKRSPSPDLKRQKPDTK-KEKIIKTVYEVEKKISPKPIQEEKPSWVTNR 230
K P ++ EK+ S + +K ++K KEK K+ E +K PK +KP
Sbjct: 4 KPDEPAKSKKSEKKEKSKNEGSKKEESKDKEKSKKS--EDKKSEDPKKEDAKKPDVKGKD 61
Query: 231 NLKKVTSERGVSVRK 275
KK E V+ +K
Sbjct: 62 TFKKPVDESAVAPKK 76
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 54 KKQSPQRTGSFEKRSPSPDLKRQKPDTK-KEKIIKTVYEVEKKISPKPIQEEKPSWVTNR 230
K P ++ EK+ S + +K ++K KEK K+ E +K PK +KP
Sbjct: 86 KPDEPAKSKKSEKKEKSKNEGSKKEESKDKEKSKKS--EDKKSEDPKKEDAKKPDVKGKD 143
Query: 231 NLKKVTSERGVSVRK 275
KK E V+ +K
Sbjct: 144 TFKKPVDESAVAPKK 158
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +3
Query: 33 KRSPSPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKP 212
+RSPS +++SP R +R S + +R+ T EK E + K + +++
Sbjct: 667 RRSPSVERRKSPLRRDERRRRHDSLENERRSSATASEKSRMQETEYNGEDEEKGLDDKEL 726
Query: 213 SWVTNRNLKKV 245
S V ++ K+
Sbjct: 727 STVPGSSMAKM 737
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 90 KRSPSPDLKRQKPDTKKEKI---IKTVYEVEKKISPKPI 197
K SP+P ++RQK + K + K E EKKI KP+
Sbjct: 372 KTSPTPPVERQKKERKPLYVAPPAKERVEKEKKIPSKPV 410
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 90 KRSPSPDLKRQKPDTKKEKI---IKTVYEVEKKISPKPI 197
K SP+P ++RQK + K + K E EKKI KP+
Sbjct: 440 KTSPTPPVERQKKERKPLYVAPPAKERVEKEKKIPSKPV 478
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.0
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +3
Query: 54 KKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVE--KKISPKPIQEEKPSWVTN 227
KK + + EK+ DL K KE K V + + KK+S K ++EEK
Sbjct: 78 KKLNSKEEVKKEKKKSEDDLLDVKKTVSKEDDKKKVDKKDGSKKLSKKKLKEEK-----K 132
Query: 228 RNLKKVTSERGVSVRKKLSRKNRNTGLPVPLKSYLSLW 341
KKV E+ +S K S N P P +W
Sbjct: 133 EKSKKVNKEKKIS--KTESDDEDNEQPPEPGSDPRKIW 168
>U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical
protein F55A4.5 protein.
Length = 705
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +3
Query: 45 SPGKKQSPQRTGSFEKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEKPSWVT 224
S + SP++T EKR S PDT+K ++ + + P P ++ P+ +
Sbjct: 527 SEAAQLSPEQTDISEKRELS-------PDTEKRRV---TFNSQVHACPPPGDQDYPNSIV 576
Query: 225 NRNLKKVTSERGVSVRKKLSRKNR 296
++LKK G R K S++NR
Sbjct: 577 -QSLKKDAIVEGKIRRLKRSKENR 599
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +2
Query: 269 SKKIEPEKPKYRAPSPSKVI-SKPL 340
SK EPEK K R PSP K + +KP+
Sbjct: 603 SKTKEPEKSKPRDPSPKKAVPAKPV 627
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 236 KEGDVRTRSFSSKKIEPEKPKYRAPSPSKVISKPLDVITSSYGPGPLDAD 385
K+ V+ R S KK P KP + +P + KP + ++ P P A+
Sbjct: 824 KKTPVKPRDPSPKKAVPAKPSTKTDAPPVSVKKP-EPVSKPKEPSPKKAE 872
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEK 209
EKR + DL RQ + +E + K+ VE + K ++EE+
Sbjct: 202 EKRETNRDLNRQLKEKSEELMQKSQILVETTLKLKAVEEER 242
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEK 209
EKR + DL RQ + +E + K+ VE + K ++EE+
Sbjct: 105 EKRETNRDLNRQLKEKSEELMQKSQILVETTLKLKAVEEER 145
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKTVYEVEKKISPKPIQEEK 209
EKR + DL RQ + +E + K+ VE + K ++EE+
Sbjct: 116 EKRETNRDLNRQLKEKSEELMQKSQILVETTLKLKAVEEER 156
>AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical
protein Y32G9A.6 protein.
Length = 840
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +3
Query: 84 FEKRSPSPDLKRQKP--DTKKEKIIKTVYEVEKKISPKPIQEEKPSWVTNRNLKKVTSER 257
FE P DL D E+ +VE+K++ + + P + K+V E
Sbjct: 537 FENLPPISDLSESSTSTDNDSEEDKSDDEDVERKVTVQETKATVPLAAAKKTRKEVRIES 596
Query: 258 GVSVRKKLSRKNR 296
G + +KK + K+R
Sbjct: 597 GSNKKKKSASKSR 609
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 EKRSPSPDLKRQKPDTKKEKIIKT-----VYEVEKKISPKPIQEE 206
E+ DLK+ + + KKEK +K + +K +P P++EE
Sbjct: 132 EQEKKEADLKKLQAEKKKEKAVKAEKAEKAEKTKKASTPAPVEEE 176
>AF125451-9|AAD12827.2| 210|Caenorhabditis elegans Hypothetical
protein Y37E11B.9 protein.
Length = 210
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 27 NGKRSPSPGKKQSPQRTGSFEKRSPSPDLKRQK 125
N S PG P R+ E+ +P+P LK+ +
Sbjct: 64 NPIESDKPGPSTEPGRSAKIEQEAPAPTLKKSE 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,546,045
Number of Sequences: 27780
Number of extensions: 407604
Number of successful extensions: 1977
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1945
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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