Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30509
(301 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P13395 Cluster: Spectrin alpha chain; n=16; Bilateria|R... 109 9e-24
UniRef50_Q13813 Cluster: Spectrin alpha chain, brain; n=70; Eume... 80 8e-15
UniRef50_A3KGU9 Cluster: Spectrin alpha 2; n=9; Coelomata|Rep: S... 58 5e-08
UniRef50_P02549 Cluster: Spectrin alpha chain, erythrocyte; n=32... 40 0.011
UniRef50_UPI0000D99C5B Cluster: PREDICTED: spectrin, alpha, eryt... 38 0.044
UniRef50_Q7XWP6 Cluster: OSJNBa0072D08.4 protein; n=5; Oryza sat... 36 0.24
UniRef50_Q4P7Z5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.31
UniRef50_UPI0001555125 Cluster: PREDICTED: similar to MGC53544 p... 35 0.41
UniRef50_UPI0000E477CC Cluster: PREDICTED: hypothetical protein;... 35 0.41
UniRef50_UPI0000EBD007 Cluster: PREDICTED: hypothetical protein;... 33 1.7
UniRef50_UPI0000F2E319 Cluster: PREDICTED: hypothetical protein;... 32 2.2
UniRef50_UPI0000EBE000 Cluster: PREDICTED: hypothetical protein;... 32 2.2
UniRef50_O43707 Cluster: Alpha-actinin-4; n=186; Eumetazoa|Rep: ... 32 2.2
UniRef50_Q4SNI4 Cluster: Chromosome 15 SCAF14542, whole genome s... 32 2.9
UniRef50_A1G397 Cluster: Putative uncharacterized protein precur... 32 2.9
UniRef50_A5NU26 Cluster: Putative uncharacterized protein; n=2; ... 31 3.8
UniRef50_Q9H9D4 Cluster: Zinc finger protein 408; n=11; Euteleos... 31 3.8
UniRef50_Q9UVF5 Cluster: pH-response regulator protein palF/RIM8... 31 3.8
UniRef50_P18091 Cluster: Alpha-actinin, sarcomeric; n=53; Bilate... 31 3.8
UniRef50_Q98263 Cluster: MC096L; n=1; Molluscum contagiosum viru... 31 5.1
UniRef50_A4FCF9 Cluster: Universal stress protein family; n=2; S... 31 5.1
UniRef50_A3J035 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A1UKT7 Cluster: Putative uncharacterized protein precur... 31 5.1
UniRef50_A6SKD3 Cluster: Predicted protein; n=2; Sclerotiniaceae... 31 5.1
UniRef50_UPI0000EBCA6E Cluster: PREDICTED: hypothetical protein,... 31 6.7
UniRef50_A7HQZ3 Cluster: Ribonuclease H; n=2; Alphaproteobacteri... 31 6.7
UniRef50_Q5ZA15 Cluster: Putative uncharacterized protein B1140D... 31 6.7
UniRef50_Q45U86 Cluster: Holocentric chromosome binding protein ... 31 6.7
UniRef50_Q9NQ45 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_UPI0000D66137 Cluster: PREDICTED: similar to hCG19301; ... 30 8.9
UniRef50_UPI0000DC09F0 Cluster: UPI0000DC09F0 related cluster; n... 30 8.9
UniRef50_Q4T294 Cluster: Chromosome undetermined SCAF10307, whol... 30 8.9
UniRef50_Q4S2M0 Cluster: Chromosome 17 SCAF14760, whole genome s... 30 8.9
UniRef50_Q74H75 Cluster: Transcription-repair coupling factor; n... 30 8.9
UniRef50_Q67R54 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_Q5YRU1 Cluster: Putative serine/threonine protein kinas... 30 8.9
UniRef50_Q4KCZ7 Cluster: Putative uncharacterized protein; n=3; ... 30 8.9
UniRef50_A3VI21 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A1SCR0 Cluster: MaoC domain protein dehydratase; n=1; N... 30 8.9
UniRef50_A4SA15 Cluster: Predicted protein; n=1; Ostreococcus lu... 30 8.9
UniRef50_Q4DHA3 Cluster: Putative uncharacterized protein; n=2; ... 30 8.9
UniRef50_A7E8J8 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_P10721 Cluster: Mast/stem cell growth factor receptor p... 30 8.9
>UniRef50_P13395 Cluster: Spectrin alpha chain; n=16; Bilateria|Rep:
Spectrin alpha chain - Drosophila melanogaster (Fruit
fly)
Length = 2415
Score = 109 bits (263), Expect = 9e-24
Identities = 55/85 (64%), Positives = 58/85 (68%)
Frame = +1
Query: 1 EENDKLRKEFAKHANTFHQWLTETRTSMMEGTGSLEQQLATLRQRASXXXXXXXXXXXXX 180
EENDKLRKEFAKHAN FHQWLTETRTSMMEG+GSLEQQL LR +A+
Sbjct: 2149 EENDKLRKEFAKHANLFHQWLTETRTSMMEGSGSLEQQLEALRVKATEVRARRVDLKKIE 2208
Query: 181 XXXXXXXXXXILDNRYTEHSTVGLA 255
ILDNRYTEHSTVGLA
Sbjct: 2209 ELGALLEEHLILDNRYTEHSTVGLA 2233
Score = 37.9 bits (84), Expect = 0.044
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 257 QWDQLDQLSMRMQHN 301
QWDQLDQLSMRMQHN
Sbjct: 2235 QWDQLDQLSMRMQHN 2249
>UniRef50_Q13813 Cluster: Spectrin alpha chain, brain; n=70;
Eumetazoa|Rep: Spectrin alpha chain, brain - Homo sapiens
(Human)
Length = 2472
Score = 80.2 bits (189), Expect = 8e-15
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = +1
Query: 1 EENDKLRKEFAKHANTFHQWLTETRTSMMEG------TGSLEQQLATLRQRASXXXXXXX 162
EENDKLR+EFA+HAN FHQW+ ETRT +++G +G+LE QL +++
Sbjct: 2201 EENDKLRQEFAQHANAFHQWIQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRS 2260
Query: 163 XXXXXXXXXXXXXXXXILDNRYTEHSTVGLA 255
ILDN+YTEHSTVGLA
Sbjct: 2261 QLKKIEDLGAAMEEALILDNKYTEHSTVGLA 2291
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 257 QWDQLDQLSMRMQHN 301
QWDQLDQL MRMQHN
Sbjct: 2293 QWDQLDQLGMRMQHN 2307
>UniRef50_A3KGU9 Cluster: Spectrin alpha 2; n=9; Coelomata|Rep:
Spectrin alpha 2 - Mus musculus (Mouse)
Length = 477
Score = 57.6 bits (133), Expect = 5e-08
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 27/112 (24%)
Frame = +1
Query: 1 EENDKLRKEFAKHANTFHQWL--TET-------------------------RTSMMEGTG 99
EENDKLR+EFA+HAN FHQW+ T T R+ M+E +G
Sbjct: 185 EENDKLRQEFAQHANAFHQWIQETRTYLLDGIAYRRVIRVCQYEVGDDLSGRSCMVEESG 244
Query: 100 SLEQQLATLRQRASXXXXXXXXXXXXXXXXXXXXXXXILDNRYTEHSTVGLA 255
+LE QL +++ ILDN+YTEHSTVGLA
Sbjct: 245 TLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLA 296
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 257 QWDQLDQLSMRMQHN 301
QWDQLDQL MRMQHN
Sbjct: 298 QWDQLDQLGMRMQHN 312
>UniRef50_P02549 Cluster: Spectrin alpha chain, erythrocyte; n=32;
Euteleostomi|Rep: Spectrin alpha chain, erythrocyte -
Homo sapiens (Human)
Length = 2418
Score = 39.9 bits (89), Expect = 0.011
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 4 ENDKLRKEFAKHANTFHQWLTETRTSMMEG-----TGSLEQQLATLRQRASXXXXXXXXX 168
+N ++ +EF ++A+TF QW+ ETR ++G TG+LE QL +++
Sbjct: 2153 KNFEMCQEFEQNASTFLQWILETRAYFLDGSLLKETGTLESQLEANKRKQKEIQAMKRQL 2212
Query: 169 XXXXXXXXXXXXXXILDNRYTEHSTVGLA 255
ILD +Y ST+GLA
Sbjct: 2213 TKIVDLGDNLEDALILDIKY---STIGLA 2238
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 257 QWDQLDQLSMRMQHN 301
QWDQL QL +RMQHN
Sbjct: 2240 QWDQLYQLGLRMQHN 2254
>UniRef50_UPI0000D99C5B Cluster: PREDICTED: spectrin, alpha,
erythrocytic 1 (elliptocytosis 2) isoform 1; n=3;
Eutheria|Rep: PREDICTED: spectrin, alpha, erythrocytic 1
(elliptocytosis 2) isoform 1 - Macaca mulatta
Length = 2440
Score = 37.9 bits (84), Expect = 0.044
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +1
Query: 4 ENDKLRKEFAKHANTFHQWLTETRTSMMEG-----TGSLEQQLATLRQRASXXXXXXXXX 168
+N ++ +EF ++A+ F QW+ ETR ++G TG+LE QL +++
Sbjct: 2174 KNFEMCQEFEQNASAFLQWILETRAYFLDGSLLKETGTLESQLEANKRKQKEIQAMKRQL 2233
Query: 169 XXXXXXXXXXXXXXILDNRYTEHSTVGLA 255
ILD +Y ST+GLA
Sbjct: 2234 TKIEDLGDNMEDALILDIKY---STIGLA 2259
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 257 QWDQLDQLSMRMQHN 301
QWDQL QL +RMQHN
Sbjct: 2261 QWDQLYQLGLRMQHN 2275
>UniRef50_Q7XWP6 Cluster: OSJNBa0072D08.4 protein; n=5; Oryza sativa
(japonica cultivar-group)|Rep: OSJNBa0072D08.4 protein -
Oryza sativa subsp. japonica (Rice)
Length = 808
Score = 35.5 bits (78), Expect = 0.24
Identities = 29/84 (34%), Positives = 35/84 (41%)
Frame = -1
Query: 253 LVPRCCAPCSGCPGSDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTVVPGNPCPPSLMC 74
L RC AP S GS +PP + L +G LC R +SPT +P P L C
Sbjct: 475 LCRRCWAPTSSPTGSPSPPPTGV-LACTAGLLC---RRCWAPTSSPTGLPSPPPTGVLAC 530
Query: 73 EFR*ATGGRCWRAWRTPSAACRSP 2
G C R W S+ SP
Sbjct: 531 ----TAGLLCRRCWAPTSSPTGSP 550
>UniRef50_Q4P7Z5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 618
Score = 35.1 bits (77), Expect = 0.31
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -1
Query: 214 GSDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTVVPGNPCPPSL 80
GS P GR L + GVSG L G VL + G + + PPSL
Sbjct: 338 GSVRPGGRYLVVDGVSGLLVGAVLERMGGDGTVIAINDAESPPSL 382
>UniRef50_UPI0001555125 Cluster: PREDICTED: similar to MGC53544
protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to MGC53544 protein - Ornithorhynchus anatinus
Length = 352
Score = 34.7 bits (76), Expect = 0.41
Identities = 28/84 (33%), Positives = 35/84 (41%)
Frame = -1
Query: 253 LVPRCCAPCSGCPGSDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTVVPGNPCPPSLMC 74
L P+ CA S D P G +LT Q S G++ R P + P P PPS C
Sbjct: 57 LKPKSCASPSSPVKPDRPSGAQLTFQRPSCLAVGQLTR------RPVLPPPQPLPPSSRC 110
Query: 73 EFR*ATGGRCWRAWRTPSAACRSP 2
E + R R + SAA P
Sbjct: 111 EGASCSLHRDARCLPSLSAAAAVP 134
>UniRef50_UPI0000E477CC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 315
Score = 34.7 bits (76), Expect = 0.41
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 30 RQARQHLPPVAHRNSHINDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPG-GA 206
+Q +H P+ H + N G G P T+ A+P S+ ++ P P TP PG G
Sbjct: 35 QQPHRHPSPMQHHPRN-NPTGPGTP-TSASIASPRSMHTSNPNLRPPTPGVPPHTPGMGP 92
Query: 207 SDPG 218
S PG
Sbjct: 93 STPG 96
>UniRef50_UPI0000EBD007 Cluster: PREDICTED: hypothetical protein;
n=5; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 195
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3
Query: 102 PGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDPGQPLHGA 236
PG+T G AP SV R + P P PG P HG+
Sbjct: 7 PGSTPGPRAPPSVTGLRDTAPPSAPGLHPRPPGSTLGHRSPRHGS 51
>UniRef50_UPI0000F2E319 Cluster: PREDICTED: hypothetical protein;
n=3; Amniota|Rep: PREDICTED: hypothetical protein -
Monodelphis domestica
Length = 374
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 241 CCAPCSGCPGSDAPPGRRLTLQGVSGQL 158
CC PC CP SD+ L L G G L
Sbjct: 81 CCCPCDSCPESDSKEKTGLGLWGARGAL 108
>UniRef50_UPI0000EBE000 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 321
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -1
Query: 193 RRLTLQGVSG-QLCGRVLRTLVGAASPTVVPGNPCPPSLMCEFR*ATGGRCWRAWRTPSA 17
R L +SG Q C VGA SP+ PG PCPP+ + G C +P A
Sbjct: 143 RTAGLDALSGHQECPEDPGGAVGAGSPSACPGWPCPPTTPRCHQPPQAGTCTTGRLSPQA 202
>UniRef50_O43707 Cluster: Alpha-actinin-4; n=186; Eumetazoa|Rep:
Alpha-actinin-4 - Homo sapiens (Human)
Length = 911
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +1
Query: 1 EENDKLRKEFAKHANTFHQW----LTETRTSMMEGTGSLEQQLATLRQRASXXXXXXXXX 168
+ N+ LR++FA AN W + E +E G+LE QL+ L+Q
Sbjct: 645 QSNEHLRRQFASQANVVGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYERSIVDYKPNL 704
Query: 169 XXXXXXXXXXXXXXILDNRYTEHS 240
I DN++T ++
Sbjct: 705 DLLEQQHQLIQEALIFDNKHTNYT 728
>UniRef50_Q4SNI4 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=4; Eumetazoa|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2203
Score = 31.9 bits (69), Expect = 2.9
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 259 LWLVPRCCAPCSGCPGSDAPPGRRLTLQGVSGQLCG-RVLRTLVGAASPTVVPGNP 95
LW V P PG++A PG L +QGV G RV+ V + P V G P
Sbjct: 844 LWDVGDGEDPEPRLPGAEALPGLLLQVQGVDAGAAGTRVVAVFVSSGLPQGVSGTP 899
>UniRef50_A1G397 Cluster: Putative uncharacterized protein
precursor; n=1; Salinispora arenicola CNS205|Rep:
Putative uncharacterized protein precursor - Salinispora
arenicola CNS205
Length = 107
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/59 (30%), Positives = 22/59 (37%)
Frame = +3
Query: 42 QHLPPVAHRNSHINDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDPG 218
+H P H N H G G G V + T P + P TP P G + PG
Sbjct: 38 RHEAP-GHENGHDESGREGPEGDEVRSPVGPATTPTAPCADPPTPTGTAPAPSGGAGPG 95
>UniRef50_A5NU26 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Methylobacterium sp. 4-46
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 45 HLPPVAHRNSHINDGGHGFPGTTVGDAAPTSVR 143
HLPP A R++ D G G PG + AAP +R
Sbjct: 91 HLPPAAARSARAGDAGRGAPG-PLPPAAPGGLR 122
>UniRef50_Q9H9D4 Cluster: Zinc finger protein 408; n=11;
Euteleostomi|Rep: Zinc finger protein 408 - Homo sapiens
(Human)
Length = 720
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 63 HRNSHINDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDP 215
H SH+ D + P +G P S+R + PE P P AS+P
Sbjct: 597 HLKSHLEDKPYRCPTCGMGYTLPQSLRRHQLSHRPEAPCSPPSVPSAASEP 647
>UniRef50_Q9UVF5 Cluster: pH-response regulator protein palF/RIM8;
n=1; Yarrowia lipolytica|Rep: pH-response regulator
protein palF/RIM8 - Yarrowia lipolytica (Candida
lipolytica)
Length = 881
Score = 31.5 bits (68), Expect = 3.8
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Frame = +3
Query: 51 PPVAHR--NSHINDGGHGFPGTTV-GDA-----APTSVR--STRPQS*PETPXXXXXXPG 200
PPV H + H++ H GT V GDA APTS+R ST P P P
Sbjct: 771 PPVVHGHVHGHVHGHSHSSTGTIVSGDASASAPAPTSIRSVSTAPSDTPTAPPVITHGFT 830
Query: 201 GASDPG 218
G PG
Sbjct: 831 GPVGPG 836
>UniRef50_P18091 Cluster: Alpha-actinin, sarcomeric; n=53;
Bilateria|Rep: Alpha-actinin, sarcomeric - Drosophila
melanogaster (Fruit fly)
Length = 924
Score = 31.5 bits (68), Expect = 3.8
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +1
Query: 1 EENDKLRKEFAKHANTFHQWLTETRTSM----MEGTGSLEQQLATLRQRASXXXXXXXXX 168
+ N+ LR++FA+ AN W+ ++ M GSLE QL L++
Sbjct: 658 QNNEMLRRQFAEKANIVGPWIERQMDAVTAIGMGLQGSLEDQLHRLKEYEQAVYAYKPNI 717
Query: 169 XXXXXXXXXXXXXXILDNRYTEHS 240
I +NRYT ++
Sbjct: 718 EELEKIHQAVQESMIFENRYTNYT 741
>UniRef50_Q98263 Cluster: MC096L; n=1; Molluscum contagiosum virus
subtype 1|Rep: MC096L - Molluscum contagiosum virus
subtype 1 (MOCV) (MCVI)
Length = 209
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Frame = +3
Query: 51 PPVAHRNSHIND--GGHGFPGTTVGDAA--PTSVRSTRPQS*PETPXXXXXXPGGASDPG 218
PP H H N G G P G + P S + P + E P P A++PG
Sbjct: 63 PPELHSGPHHNHPHAGSGEPARRQGQPSLVPASCLARTPSAGAEVPCARQAPPARATEPG 122
Query: 219 QP 224
+P
Sbjct: 123 RP 124
>UniRef50_A4FCF9 Cluster: Universal stress protein family; n=2;
Saccharopolyspora erythraea NRRL 2338|Rep: Universal
stress protein family - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 297
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1
Query: 208 DAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTVVPGNPCPPSLM 77
D G RL + G G+ GRV R ++G+ S VV PCP +++
Sbjct: 252 DEAKGARLLVVGSHGR--GRVRRLVLGSVSHAVVHHAPCPVAVL 293
>UniRef50_A3J035 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 75
Score = 31.1 bits (67), Expect = 5.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 10 DKLRKEFAKHANTFHQWLTETRTSMMEGTGSLEQQ 114
DK+ F + + + +W+TETR + EG SL+++
Sbjct: 21 DKMFLVFERLQSEYDEWVTETRAKIQEGIESLDKE 55
>UniRef50_A1UKT7 Cluster: Putative uncharacterized protein
precursor; n=2; Mycobacterium|Rep: Putative
uncharacterized protein precursor - Mycobacterium sp.
(strain KMS)
Length = 597
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 229 CSG--CPGSDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTVVP 104
C+G C G PG R+ + G+ RVL + V + PT++P
Sbjct: 539 CAGAECTGIYGAPGSRVEIPTGKGRATARVLGSAVATSRPTLIP 582
>UniRef50_A6SKD3 Cluster: Predicted protein; n=2;
Sclerotiniaceae|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 202
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -1
Query: 238 CAPCSGCPGSDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTVVPGNPCPPS 83
C P S PGS APP T + T + ++PT P +P PP+
Sbjct: 42 CTP-SSAPGSSAPPSTTSTTSKAP-PVSTSTSTTAISTSAPTSPPSSPGPPN 91
>UniRef50_UPI0000EBCA6E Cluster: PREDICTED: hypothetical protein,
partial; n=1; Bos taurus|Rep: PREDICTED: hypothetical
protein, partial - Bos taurus
Length = 211
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/42 (47%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 211 SDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPT-VVPGNPCP 89
S APP RR G QL GR L A T PGNPCP
Sbjct: 19 SAAPPPRRPRRVGPLSQL-GRALARASAAGRATGPAPGNPCP 59
>UniRef50_A7HQZ3 Cluster: Ribonuclease H; n=2;
Alphaproteobacteria|Rep: Ribonuclease H - Parvibaculum
lavamentivorans DS-1
Length = 269
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 151 RVLRTLVGAASPTVVPGNPCPPSLMCEFR*ATGG 50
R + +L A ++ GN CPPSL C R GG
Sbjct: 143 RAVASLPRAPHIALIDGNRCPPSLACASRAVIGG 176
>UniRef50_Q5ZA15 Cluster: Putative uncharacterized protein
B1140D12.19; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
B1140D12.19 - Oryza sativa subsp. japonica (Rice)
Length = 94
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 18 AEGVRQARQHLPPVAHRNSHIND-GGHGFPGTTVGDAAPTSVR 143
AE R+ R H P AHR H +D HG G G+AAP R
Sbjct: 52 AEEARRRRHHDAP-AHRRPHGDDLSRHGRGGARRGEAAPRDPR 93
>UniRef50_Q45U86 Cluster: Holocentric chromosome binding protein
protein 1; n=1; Caenorhabditis remanei|Rep: Holocentric
chromosome binding protein protein 1 - Caenorhabditis
remanei
Length = 357
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 EENDKLRKEFAKHANT--FHQWLTETRTSMMEGTGSLEQQLATLRQRA 138
EE KLR+E A +A Q L E R M+ SLEQQL + R +
Sbjct: 116 EEIAKLREEAANNARVTELEQELEENRKLMISEMASLEQQLESARDNS 163
>UniRef50_Q9NQ45 Cluster: Putative uncharacterized protein; n=1;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 93
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -1
Query: 247 PRCCAPCSGCPGSDAPPGRRLTL---QGVSGQLCGR 149
PRCC C+ CP APP L +SG C R
Sbjct: 7 PRCCLCCAACPVCWAPPSPASALPRPPRLSGSSCSR 42
>UniRef50_UPI0000D66137 Cluster: PREDICTED: similar to hCG19301;
n=9; Euteleostomi|Rep: PREDICTED: similar to hCG19301 -
Mus musculus
Length = 184
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 30 RQARQHLPPVAHRNSHINDGGHGFPGTTVGDAAP 131
R + LP VAHRN I+ G P T G A P
Sbjct: 19 RDCFRELPRVAHRNQAIHFGSPSQPSTDPGKAGP 52
>UniRef50_UPI0000DC09F0 Cluster: UPI0000DC09F0 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC09F0 UniRef100 entry -
Rattus norvegicus
Length = 90
Score = 30.3 bits (65), Expect = 8.9
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 247 PRCCAPCSGCPGSDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTVVPGNPCPPSLMCE 71
P CAPC CP S P R G LC + + P PCPPS C+
Sbjct: 26 PPQCAPCPPCP-SCPPLACRPQNYGPVSPLCPPLCPPKCSSTCP------PCPPSCQCQ 77
>UniRef50_Q4T294 Cluster: Chromosome undetermined SCAF10307, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10307,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 641
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 229 CSGCPGSDAPPGRRLTLQGVSGQLCGRVLRTLVGA 125
CS P PP + +Q VSG L G VL T+ G+
Sbjct: 521 CSSTPEDSCPPPQITQVQPVSGPLEGGVLVTITGS 555
>UniRef50_Q4S2M0 Cluster: Chromosome 17 SCAF14760, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 738
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -1
Query: 157 CGRVLRTLVGAASPTVVPGNPCPPSLMCEFR*ATG--GRCWRAWRTPSAAC 11
CG R A+ P V+P PCPP+ R T CWR W + AC
Sbjct: 241 CGPGSRDQQRASKP-VLPACPCPPTGSYTRRSITTELPSCWRYWAGNTLAC 290
>UniRef50_Q74H75 Cluster: Transcription-repair coupling factor; n=4;
Desulfuromonadales|Rep: Transcription-repair coupling
factor - Geobacter sulfurreducens
Length = 1157
Score = 30.3 bits (65), Expect = 8.9
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -1
Query: 202 PPGRRLTLQGVSGQLCGRVLRTLVG-AASP--TVVPGNPCPPSLMCEFR*ATG 53
PP RLTL G+ G +L L+G A +P VVP L E R TG
Sbjct: 18 PPAARLTLAGLRGSSPAYLLARLIGEAGAPFLVVVPDAEAAAELTTELRFFTG 70
>UniRef50_Q67R54 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 149
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = -1
Query: 277 LVQLVPLWLVPRCCAPCSGCPGSDAPPGRRLT-----LQGVSGQLCGRVLRTLVGAAS 119
L+ L+P+WLVP C P C PG LT L G+ G L R L + G S
Sbjct: 91 LMILIPMWLVPTCDMPGMVC-NLSFKPGAYLTGGITALSGLGGTLRLRRLDVMGGERS 147
>UniRef50_Q5YRU1 Cluster: Putative serine/threonine protein kinase;
n=1; Nocardia farcinica|Rep: Putative serine/threonine
protein kinase - Nocardia farcinica
Length = 942
Score = 30.3 bits (65), Expect = 8.9
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -1
Query: 232 PCSGCPGSDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTV-VPGNPCPPS 83
P G PG AP G GV GQL V A P VP P PP+
Sbjct: 353 PAPGVPGQPAPGGPAQPAPGVPGQLASGV------PAQPVPGVPAQPAPPA 397
>UniRef50_Q4KCZ7 Cluster: Putative uncharacterized protein; n=3;
Pseudomonas|Rep: Putative uncharacterized protein -
Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Length = 321
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 301 VVLHAHRELVQLVPLWLVPRCCAPC-SGCPGSDAP 200
V H H + V + PL L P CCAPC + P D P
Sbjct: 6 VGFHGHGKPVTMCPLSL-PLCCAPCATHLPRKDRP 39
>UniRef50_A3VI21 Cluster: Putative uncharacterized protein; n=1;
Rhodobacterales bacterium HTCC2654|Rep: Putative
uncharacterized protein - Rhodobacterales bacterium
HTCC2654
Length = 225
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -1
Query: 259 LWLVPRCCAPCSGCPGSDAPPGRRLTLQGVSGQLCGRVLRTLV--GAASPTVVPGNP 95
LWL+ AP S DA P R Q ++ QL G VL V SPT P P
Sbjct: 159 LWLIAGDNAPVSMGVLPDAAPARLPVSQDIAAQLDGAVLAISVEPPGGSPTGAPTGP 215
>UniRef50_A1SCR0 Cluster: MaoC domain protein dehydratase; n=1;
Nocardioides sp. JS614|Rep: MaoC domain protein
dehydratase - Nocardioides sp. (strain BAA-499 / JS614)
Length = 306
Score = 30.3 bits (65), Expect = 8.9
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = -1
Query: 175 GVSGQLCGRVLRTLVGAASPTVVPGNPCPPSLMCEFR*ATG--GRCWRAWRTPSAACRSP 2
G G+L R T A+P VP P PSL + G G WRTP R P
Sbjct: 126 GEDGRLIARARATESLPAAPDGVPERPPLPSLPRRVSPSAGPVGEAAHPWRTPMPGARLP 185
>UniRef50_A4SA15 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 439
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 157 CGRVLRTLVGAASPTVVPGNPCPP 86
C LRT +G ASPT P P PP
Sbjct: 343 CASALRTPLGQASPTADPSPPPPP 366
>UniRef50_Q4DHA3 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 427
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 42 QHLPPVAHRNSHINDGGHGFPGTTVGDAAPTS 137
+H P + N ++NDG GTT+ DA+P++
Sbjct: 297 EHQYPGSTYNKYLNDGPKAAEGTTLNDASPST 328
>UniRef50_A7E8J8 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 694
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 66 RNSHINDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDPGQ 221
R D GH FP TV P + P P P P G + PGQ
Sbjct: 635 RRDDRRDEGHKFPANTVPPVMPPFPLGSFPYPLPTLPNGLPMFPPGFTFPGQ 686
>UniRef50_P10721 Cluster: Mast/stem cell growth factor receptor
precursor; n=88; root|Rep: Mast/stem cell growth factor
receptor precursor - Homo sapiens (Human)
Length = 976
Score = 30.3 bits (65), Expect = 8.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 148 VLRTLVGAASPTVVPGNPCPPSL 80
+LR G++ P+V PG P PPS+
Sbjct: 17 LLRVQTGSSQPSVSPGEPSPPSI 39
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.312 0.124 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,582,381
Number of Sequences: 1657284
Number of extensions: 5476467
Number of successful extensions: 16679
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 15942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16653
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -