Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30508
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 68 8e-12
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 8e-08
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 54 2e-07
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 52 5e-07
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 50 3e-06
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 49 4e-06
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 46 5e-05
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.013
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 37 0.017
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.038
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.051
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 34 0.12
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.15
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 33 0.20
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 33 0.27
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 32 0.62
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 32 0.62
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 31 1.1
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 31 1.1
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 30 2.5
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 30 2.5
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34) 29 4.4
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 29 4.4
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 29 4.4
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_25359| Best HMM Match : p450 (HMM E-Value=0) 29 5.8
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 29 5.8
SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 28 7.7
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 28 7.7
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 28 7.7
SB_7551| Best HMM Match : zf-HIT (HMM E-Value=8.4) 28 7.7
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 7.7
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 68.1 bits (159), Expect = 8e-12
Identities = 33/87 (37%), Positives = 54/87 (62%)
Frame = +2
Query: 242 FWSIREIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 421
F E++ V DP T RSRGF F+ FK P+++D V+ +G +++D KK
Sbjct: 128 FEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGA-----QELDGKKMVTTT 182
Query: 422 GKIFVGGLSSEISDDEIRNFFSEFGTI 502
KIF+GGLS+ S+++++ +FS+FG +
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGKV 209
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +3
Query: 183 RKLFVGGLSWETTDKELRDHFGAYVK 260
+K+F+GGLS T++++++ +F + K
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGK 208
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 54.8 bits (126), Expect = 8e-08
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +2
Query: 242 FWSIREIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD-----PKK 406
F EI+ VK DPNT RSRGF F+ FK E V++ H I + + PK+
Sbjct: 135 FTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST-SHRIQGRLCEVRLPRPKE 193
Query: 407 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEWRCP 520
K+FVG L ++ + +F++FG + + P
Sbjct: 194 ELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP 231
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/75 (30%), Positives = 50/75 (66%), Gaps = 11/75 (14%)
Frame = +2
Query: 296 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK-----------AKARHGKIFVGG 442
GRSRGF F+ +++ +S+++V+ +H +++++++PK+ A ++ KIFVGG
Sbjct: 86 GRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGG 145
Query: 443 LSSEISDDEIRNFFS 487
L+S +++I+ +F+
Sbjct: 146 LASTTVEEDIKEYFN 160
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 257 EIESINVKTD-PNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 412
E+ +++K D N R RGFAF+ F E ++KV A H I K+ + KKA+
Sbjct: 170 EVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAE 222
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 526 KTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 663
K + +GF F+T+ES VN++LK + +E++ KR+ P+ +
Sbjct: 83 KRDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRSVPRDE 128
Score = 36.7 bits (81), Expect = 0.022
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 183 RKLFVGGLSWETTDKELRDHFGAY 254
RK+F+GGL+W TT++ L+D+F +
Sbjct: 50 RKIFIGGLNWNTTEEGLKDYFSQW 73
Score = 35.1 bits (77), Expect = 0.067
Identities = 14/41 (34%), Positives = 30/41 (73%)
Frame = +2
Query: 425 KIFVGGLSSEISDDEIRNFFSEFGTILEWRCPLTKQRTKER 547
KIF+GGL+ +++ ++++FS++GTI++ C + K+ + R
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVD--CVIMKRDGRSR 89
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 508 MEMPFDKTKNQR-KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 657
+++ D+ +R +GF F+TF+++++V + I K+ +VK+A P+
Sbjct: 174 VDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQ 224
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +3
Query: 183 RKLFVGGLSWETTDKELRDHFGA 251
RK+FVGGL+ T +++++++F +
Sbjct: 139 RKIFVGGLASTTVEEDIKEYFNS 161
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/78 (38%), Positives = 40/78 (51%)
Frame = +2
Query: 257 EIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFV 436
E+ +++K D TGR RGFAF+ FK D + I K R KIFV
Sbjct: 54 ELVGVDIKMDALTGRPRGFAFVQFKHQSEADAIDPKPAAPIG------KPPHLRVKKIFV 107
Query: 437 GGLSSEISDDEIRNFFSE 490
GGL E SD++IR +F +
Sbjct: 108 GGLKPETSDEKIREYFGK 125
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +1
Query: 523 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 657
+ + N+R+GFCF++F+SE V+ + +T I G +V+VKRA PK
Sbjct: 138 EHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRALPK 182
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 132 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAY 254
G S D N DD KLFVGGLS+ETT + L+++F Y
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKY 52
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +2
Query: 251 IREIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 409
++EIE I T+ ++ R RGF F+ F + +++DK+ H I KV+ K+A
Sbjct: 130 VKEIEYI---TEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRA 179
Score = 34.7 bits (76), Expect = 0.088
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +2
Query: 422 GKIFVGGLSSEISDDEIRNFFSEFGTIL 505
GK+FVGGLS E + + ++ +FS++G ++
Sbjct: 29 GKLFVGGLSYETTKESLKEYFSKYGELV 56
Score = 33.5 bits (73), Expect = 0.20
Identities = 12/22 (54%), Positives = 20/22 (90%)
Frame = +3
Query: 183 RKLFVGGLSWETTDKELRDHFG 248
+K+FVGGL ET+D+++R++FG
Sbjct: 103 KKIFVGGLKPETSDEKIREYFG 124
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/85 (30%), Positives = 46/85 (54%)
Frame = +2
Query: 293 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 472
+G+S+GFAF+ + E+++ V+ +H I+N V +K + + K+ + + S I + +I
Sbjct: 79 SGKSKGFAFVRLRKKEAVESVLGRDDHVIDNSDVSMEK-QDTYRKVILKNIPSSIGESQI 137
Query: 473 RNFFSEFGTILEWRCPLTKQRTKER 547
FS G I P +TKER
Sbjct: 138 LEHFSSSGEIASVYIP-ENLKTKER 161
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/87 (33%), Positives = 44/87 (50%)
Frame = +2
Query: 242 FWSIREIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 421
F E+ES+ + G SR + F++FK + K + H IN K VD K++
Sbjct: 100 FEQFGEVESVRIMRT-FLGYSRNYGFVLFK-DDGPSKEVLKKSHVINGKTVDVGKSR-NF 156
Query: 422 GKIFVGGLSSEISDDEIRNFFSEFGTI 502
I+VGGL S ++ +R F +FG I
Sbjct: 157 RVIYVGGLPSHFTEQTVREHFKKFGVI 183
Score = 33.1 bits (72), Expect = 0.27
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 380 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 502
N+ PK + +FVGGL+S ++ ++++F +FG +
Sbjct: 66 NSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEV 106
Score = 33.1 bits (72), Expect = 0.27
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = +2
Query: 257 EIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 394
++ +++ TD TG+S+G + + P +++K++ H I +V
Sbjct: 344 QVAKVHILTDRETGKSKGCGVVKLRHPGTVNKILEEPVHVIGKSQV 389
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 21/87 (24%)
Frame = +2
Query: 305 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA---------------------KARH 421
+GF F+ F+ P +I+ V+A H ++ K +DPK A A
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVMGGPQRGSAND 201
Query: 422 GKIFVGGLSSEISDDEIRNFFSEFGTI 502
GK+F+GGL+ ++++++ +FS +G +
Sbjct: 202 GKVFIGGLAFGTTEEDLKEYFSTYGMV 228
Score = 35.1 bits (77), Expect = 0.067
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +3
Query: 168 GRDDDRKLFVGGLSWETTDKELRDHFGAY 254
G +D K+F+GGL++ TT+++L+++F Y
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLKEYFSTY 225
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 520 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 657
F++ KGF F+TF + +L + GK +D K A P+
Sbjct: 134 FERRARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR 179
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2
Query: 284 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 418
D T R RGF F+ F++ S DK H INNKKV+ KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 520 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 657
FDK + +GF F+TFESE + T I K+V+VK+A PK
Sbjct: 4 FDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +2
Query: 242 FWSIREIESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNK--KVD---PK 403
F ++ + S + D TG+S G+AF+ + P+ +K V + NK KV P
Sbjct: 47 FGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPS 106
Query: 404 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 505
+ ++ +++ GL ++ ++E+ F FG I+
Sbjct: 107 STEIKNANLYISGLPKDMKEEEVEALFKPFGKII 140
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Frame = +2
Query: 257 EIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGE-HTINNKKVDPKKAKARHG-- 424
++ S+++ P G+SR F F+ F + ID ++ E H+I+NK+V+ K+A R
Sbjct: 38 DVSSVSLAKTPE-GKSRKFCFVEFSNGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPN 96
Query: 425 --------KIFVGGLSSEISDDEIR 475
K+F+GGL E S+++++
Sbjct: 97 ELAHVRTKKLFIGGLKDEHSEEDVK 121
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +1
Query: 502 LRMEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 648
L ++M D+ N+ KG+CF+ F +E +V+ L + GK+V++K+A
Sbjct: 133 LEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Frame = +3
Query: 174 DDDR--KLFVGGLSWETTDKELRDHFGAY 254
DD + KLFVGGL+ +TT++ +R +F ++
Sbjct: 3 DDSKLMKLFVGGLNEDTTEETVRAYFKSF 31
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 425 KIFVGGLSSEISDDEIRNFFSEF 493
K+FVGGL+ + +++ +R +F F
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSF 31
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 269 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 409
I + D T + +G+ F+ F +DK+ + K V+ KKA
Sbjct: 135 IKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 EIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK----AKAR-H 421
EI ++ DP TG ++GFAF F S + + T+N+K + P + K+R +
Sbjct: 178 EIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT----TLNDKDIRPGRRLAICKSRSN 233
Query: 422 GKIFVGGLSSEISDDEIRNFFSEFGTILE 508
++FV G+ S +EI FS+ T L+
Sbjct: 234 SRLFVKGIPKRKSKEEIFQEFSKVTTDLQ 262
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 150 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAY 254
N E D KLFVGGL+ ETT++ LR++F AY
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFEAY 37
Score = 36.7 bits (81), Expect = 0.022
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Frame = +2
Query: 242 FWSIREIESINVKTDPNTGRSRGFAFIVF---KAPESI--DKVMAAGEHTINNKKVDPKK 406
F + E+ + V D T +SRGF ++ F K ++ DKV G H I+ K+V+ K+
Sbjct: 34 FEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKV-ENGAHRIDGKEVEVKR 92
Query: 407 AKARHG----------KIFVGGLSSEISDDEIR 475
A R KIFVGGL + + ++I+
Sbjct: 93 AIPRDDNSATSHEKTKKIFVGGLPEDATKEDIQ 125
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +1
Query: 523 DKTKNQRKGFCFITFESEQVVNDLLKTPKRT----IGGKEVDVKRATPKPD 663
D + +GF ++TF +V ++LK I GKEV+VKRA P+ D
Sbjct: 48 DSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRDD 98
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 523 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 657
D+TK+ +GF F+ +E ++L K + GK V+ K+ATP+
Sbjct: 147 DETKH--RGFAFVELNNEDQADELCCVKKIHVKGKMVEAKKATPR 189
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 425 KIFVGGLSSEISDDEIRNFFSEFGTILE 508
K+FVGGL+ E +++ +R +F +G + +
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTD 42
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 263 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 358
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 425 KIFVGGLSSEISDDEIRNFFSEFGTILE 508
K+FVGG+ E DD +R FF++FG I E
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIRE 38
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 36.7 bits (81), Expect = 0.022
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 22/102 (21%)
Frame = +2
Query: 269 INVKTDPNTGRSRGFAFIVF-------KAPESIDKVMAAGEHTINN---KKVDPKKAKAR 418
+ V DP +S+GF F+ F KA +D V G+ N +K +P + K
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPL 601
Query: 419 ------------HGKIFVGGLSSEISDDEIRNFFSEFGTILE 508
+ ++VG L ++ D E++ FS++G+ILE
Sbjct: 602 VWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILE 643
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 523 DKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRATPK 657
D KN+ KGF F++F E + + TIGGK+V A K
Sbjct: 547 DPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK 592
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 35.9 bits (79), Expect = 0.038
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 257 EIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 427
+I S+ V TDP G+S+GF F+ F+ PE ++ + + +N K++ ++ A K
Sbjct: 134 KIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAV----NVLNGKEIGGRRLWAGRAK 185
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 35.5 bits (78), Expect = 0.051
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 260 IESINVKTDPNTGRSRGFAFIVFKAPESI 346
+E++ + TD NTG+ R F F+ F +P S+
Sbjct: 483 LENVRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 35.1 bits (77), Expect = 0.067
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 266 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 358
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 257 EIESINVKTDPNTGRSRGFAFIVFKAPESIDKV---MAAGEHTINNKKVDPKKAKARHGK 427
++ + V +D T R RGFAF+ F + ++++ + E + KV+ +++ + G
Sbjct: 254 DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSREQRGG 313
Query: 428 IFVGGLSS 451
GG S
Sbjct: 314 GRGGGYRS 321
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 257 EIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 358
++ + V TD TGR RGF F+ F + E ++K +
Sbjct: 29 DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +2
Query: 335 PESI-DKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI-L 505
PE++ D+++ + ++N + D + K+FVGGL +I +DEI F FG++ +
Sbjct: 313 PENLADQIVPSLASSLNCSPNSDSEHIPRFSRKVFVGGLPPDIDEDEIHASFCRFGSLTV 372
Query: 506 EW 511
+W
Sbjct: 373 DW 374
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +2
Query: 260 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 421
+ ++++ D T +G+ F+ F E D + + K + KA A +
Sbjct: 39 VVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRVNKASAHNKNLDV 98
Query: 422 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 508
+F+G L +E+ + + + FS FG IL+
Sbjct: 99 GANLFIGNLDTEVDEKLLYDTFSAFGVILQ 128
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 260 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 382
+++ + D +TG S+GFAFI F + ++ D + A G++ N
Sbjct: 127 LQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCN 169
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 33.5 bits (73), Expect = 0.20
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 425 KIFVGGLSSEISDDEIRNFFSEFGTILE 508
++F+G L S + D ++ FS++GTILE
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILE 385
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 386 KKVDPK--KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEWRCPLTKQRTKER 547
KK+ PK + + G I++G + ++EI+ FF +FGT+ R +K+ + +
Sbjct: 84 KKIKPKGDEDELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSK 139
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +2
Query: 428 IFVGGLSSEISDDEIRNFFSEFGTILEWRCPLTKQRTKER 547
+FVG + E S+++++ FSE G ++ +R ++ K +
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPK 66
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 425 KIFVGGLSSEISDDEIRNFFSEFGTILE 508
+IFV G + E ++ E+R FF E+G + E
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKE 36
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 171 RDDDRKLFVGGLSWETTDKELRDHFGAY 254
+D +++FV G + ETT+ ELR F Y
Sbjct: 4 QDISKRIFVKGFNRETTESELRAFFEEY 31
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 425 KIFVGGLSSEISDDEIRNFFSEFGTILE 508
K+FVG +S ++++R FS FGTI E
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEE 242
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 260 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK-----AKARHG 424
I + DP +G ++GFAF F + + ++NK++ P K +
Sbjct: 178 IYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV----KKLDNKEIRPGKRLGVCISVANS 233
Query: 425 KIFVGGLSSEISDDEIRNFFSE 490
++FVG + S EI FS+
Sbjct: 234 RLFVGSIPKTKSKQEILEEFSK 255
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 293 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV--DPK 403
TG+S+GF ++ ++ ES + + AG H I+ K V +PK
Sbjct: 99 TGKSKGFGYVTYENAESAQRAL-AGTHIIDGKWVIAEPK 136
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 260 IESINVKTDPNTGRSRGFAFIVFKAPESI 346
+E +++ D +GRSRGF F++ ++ + I
Sbjct: 34 VEKVDILRDKESGRSRGFGFVLLQSADQI 62
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 425 KIFVGGLSSEISDDEIRNFFSEFGTI 502
KIF+GGL + +++D+++ S FG +
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGEL 699
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 66 NDNFAQDITTDNQLNGNAENGGGDSQDH-NSAEAPGRDDD 182
ND+ DI D+ NGN + G D+ D N E G DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDDD 58
>SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = -3
Query: 369 SPAAMTLSIDSGALNTMKANPRDLPVFGSVFTLILSISRMLQNDHGAPYLWSPSSAHQQK 190
SP A++ +D G +A +++P F TL L + G P ++PSS H++
Sbjct: 371 SPDALSKGLDMGWGALSRAGVQEMPAFP---TLRLPLHPFASTGFGTPAFYNPSSYHRE- 426
Query: 189 VFCRHRVLGP 160
+ VLGP
Sbjct: 427 ---YYPVLGP 433
>SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 63 NNDNFAQDITTDNQLNGNAE----NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKE 230
+ND D D+++NG + N GGD D + + DDD + G S++ D +
Sbjct: 58 DNDGGDDDDDDDDEVNGGNDDDDFNNGGDCDDDDDDDDDDDDDDDDINKKGASYDDDDDD 117
Query: 231 LRDHF 245
D +
Sbjct: 118 DDDGY 122
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 251 IREIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 397
I I+ + K+ N G++ G AF+VFK+ K + I ++ ++
Sbjct: 358 IASIDLLKHKSGKNQGKNTGVAFVVFKSNNDASKALKMDRSYIGHRYIE 406
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +2
Query: 275 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSE 454
V +P G SRGFAF+ + E +K G+ N ++V+ + +G G +
Sbjct: 237 VAINPANGGSRGFAFVDYATAEEAEK----GQRAHNGRQVEGSNIRVAYGS--PGRTGAS 290
Query: 455 ISDDEIRNFFSEFGTI 502
I ++ N + + T+
Sbjct: 291 ILGSQLDNTQAGYTTV 306
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 189 LFVGGLSWETTDKELRDHF 245
L+VGGL + T+++LRDHF
Sbjct: 306 LYVGGLEGKVTEQDLRDHF 324
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/25 (32%), Positives = 19/25 (76%)
Frame = +2
Query: 428 IFVGGLSSEISDDEIRNFFSEFGTI 502
++VGGL ++++ ++R+ F +FG +
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGEL 330
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +3
Query: 63 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKL--------FVGGLSWE 215
NN+N D +DN + N++N ++ D+N+ R D ++ ++ GL+WE
Sbjct: 613 NNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKNPEGWIRGLNWE 671
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/75 (17%), Positives = 34/75 (45%)
Frame = +2
Query: 242 FWSIREIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 421
F + +ES+ + D TG +GF +++F++ +++ + +K+ +K +
Sbjct: 76 FTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPSKDKP 135
Query: 422 GKIFVGGLSSEISDD 466
F+ + D+
Sbjct: 136 QTEFISHIQVRFRDN 150
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 63 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 182
NN+N + +N N N N ++ D NS E DDD
Sbjct: 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDD 57
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 260 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 358
++++++ TD SRGFA++ + PE +K +
Sbjct: 1183 VKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 508 MEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRATP 654
+++P D+T N +GF ++ + + E+ L I G+E+ V+ P
Sbjct: 1186 VDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQIDGQEIAVQSVLP 1235
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +2
Query: 383 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEWRCPLTKQRTKERA 550
+K + K + K+FVG + ++ E+++FF FG ++ + R K+R+
Sbjct: 66 SKDISKYKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDVV--YAQIIMDRVKKRS 119
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 63 NNDNFAQDITTDNQLNGNAE-NGGGDSQDHNS 155
NND+ D T D+ N N + NGGG D+N+
Sbjct: 193 NNDDDDDDDTDDDDHNNNDDDNGGGGDDDNNN 224
>SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34)
Length = 722
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -3
Query: 381 LMVCSPAAMTLSIDSGALNTMKANPRDLPVF-GSVFTLILSISRMLQNDHGAPYLWSPSS 205
L + P+A++ +I K P LPV G+ +T S +N H YLW
Sbjct: 525 LPITFPSAVSGTISPYLDIVNKYTPHGLPVVRGNEYTPHGSPVARGKNTHKTGYLWPRER 584
Query: 204 AHQQKVFCRH 175
H +V C H
Sbjct: 585 IHTTRVTCCH 594
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 66 NDNFAQDITTDNQLN-GNAENGGGDSQDHNS 155
+DNF DI+ D LN G A N + ++NS
Sbjct: 335 HDNFNDDISNDGNLNGGGANNNNNKNNNYNS 365
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 63 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 182
NN+N +I +N N N N ++ ++N+ + DDD
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDD 151
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 60 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 182
A N+ +A+ +T +N N N N ++ ++N+ DDD
Sbjct: 160 AINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNNNDDD 200
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 28.7 bits (61), Expect = 5.8
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 505 RMEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 603
++++ +D + Q KGFCF+T +++ + ++T
Sbjct: 303 KVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQT 335
>SB_25359| Best HMM Match : p450 (HMM E-Value=0)
Length = 1084
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 264 SISRMLQNDHGAPYLWSPSSAHQQKVFCRHRVLGPQHCYDLANHRHRSL 118
SIS + ++ G P L+ P A Q ++ CR + LG + L ++H S+
Sbjct: 498 SISSIYLHNFGPPVLFEPQKA-QPQLSCRIKTLGTRLASILIVYKHMSV 545
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 260 IESINVKTDPNTGRSRGFAFIVFKAPES 343
+ + V TD TGR RGF F+ +A ++
Sbjct: 107 VVDVRVITDRETGRPRGFGFVTLEAKKT 134
>SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 63 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 182
++DN D DN NG+ ++ D D + +A DDD
Sbjct: 61 DSDNNYDDNDDDNDDNGDDDDNDDDDDDDDDDDADDDDDD 100
>SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 69 DNFAQDITTDNQLNGNAENGG-GDSQDHNSAEAPGRDDD 182
D + D D+ + + +N G GD D+ AE G DDD
Sbjct: 821 DYYYDDDDDDDDDDDDGDNDGDGDGDDYGDAENYGEDDD 859
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +3
Query: 66 NDNFAQDITTDNQLNGNAENGGGDSQDHNS 155
ND+ A D++ ++ + G+ +NGG D+ ++++
Sbjct: 180 NDDSASDVSIEDIIYGDDDNGGDDNDNYDN 209
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 395 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 508
DPK + +FVG L + IS ++R F +FG +L+
Sbjct: 232 DPKATRT----LFVGNLETGISCQDLRLSFEKFGVVLD 265
>SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 185 SVVIASWGLSTVMILRITATVLCISIKLV 99
++++ S G++ L ITAT+LC SI L+
Sbjct: 267 TILLESSGVTLPKALHITATILCYSISLL 295
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 123 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRD 239
NGG + D + A R++ +LFV GL E ++ +LR+
Sbjct: 603 NGGKSTDDASDAAYELRNEGVELFVVGLGDENSEAQLRE 641
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 425 KIFVGGLSSEISDDEIRNFFSEFGTILEWRCPLTKQRTKER 547
+IF G L SE++D+ + F+++ + L+ + K+ K +
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSK 258
>SB_7551| Best HMM Match : zf-HIT (HMM E-Value=8.4)
Length = 243
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 600 DSQKNNWWKGGRCEACNTKTRWPRRHRHAK 689
D K+ WW R E C K + R+H+H K
Sbjct: 74 DIVKSVWW-WRRLEKCKPKKKRKRKHKHTK 102
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 63 NNDNFAQDITTDNQLNGNAENGGGDSQD 146
+++++A D DN +NG+ ++GGGD D
Sbjct: 585 DDEDYAGD--GDNDVNGDGDSGGGDDDD 610
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,757,925
Number of Sequences: 59808
Number of extensions: 466785
Number of successful extensions: 2982
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2781
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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