Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30504
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   0.98 
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   0.98 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.2  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 189 KPVAGKAYRSAYISQKLTK 245
           KP AGK  R+AY S +L +
Sbjct: 84  KPTAGKRARTAYTSAQLVE 102


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 189 KPVAGKAYRSAYISQKLTK 245
           KP AGK  R+AY S +L +
Sbjct: 75  KPTAGKRARTAYTSAQLVE 93


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 224 YKPKAHKIHRTVKEVMFKK 280
           YK K HK+   +KE M K+
Sbjct: 477 YKDKLHKVAPRIKERMMKE 495


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 221 GRSVSLARHWLHLTVPVSL 165
           G S+SLA  WL L + +++
Sbjct: 63  GESISLASGWLDLYLGITI 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,958
Number of Sequences: 336
Number of extensions: 1889
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)