Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30501
(785 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0192 - 1523572-1526097 44 1e-04
12_01_0198 - 1461305-1463812 42 7e-04
01_06_0196 - 27410837-27413296 32 0.59
09_02_0533 - 10325681-10326211,10326260-10326328,10326758-103268... 31 0.79
02_05_1157 - 34533625-34533875,34535279-34536340,34536673-345368... 31 0.79
10_08_0026 - 14253680-14253894,14253981-14254109,14254704-142547... 31 1.0
09_06_0281 + 22014394-22015534,22016041-22017056 31 1.0
09_06_0280 + 22010270-22011407,22011890-22013097 31 1.0
07_03_0831 - 21810002-21810319,21810423-21810573,21810660-218108... 31 1.0
12_02_0882 - 23978169-23979251 31 1.4
04_01_0609 + 7966263-7966366,7967945-7968706,7972607-7972851,797... 30 1.8
12_02_1103 + 26116614-26117607,26118060-26118242,26118344-26119518 30 2.4
04_04_1395 + 33219711-33220629,33220750-33220787 30 2.4
09_03_0111 - 12440818-12441129,12441242-12441585,12441663-124419... 29 3.2
06_01_0477 + 3404648-3404657,3405385-3405461,3405638-3406501 29 3.2
02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263 29 3.2
07_03_1213 + 24921603-24921746,24921923-24922786 29 4.2
02_04_0542 - 23762549-23762961,23763051-23763453 29 4.2
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 29 4.2
07_03_0909 + 22512313-22512474,22513151-22513465,22513539-225166... 29 5.5
04_03_0768 - 19396146-19396607,19397855-19398175,19398424-193995... 29 5.5
02_05_0039 + 25335690-25335883,25335984-25336131,25337292-253373... 29 5.5
01_06_0199 - 27467548-27469992 29 5.5
11_08_0022 + 27733247-27733935,27735722-27735981,27736213-277364... 28 7.3
09_06_0278 + 21991016-21992120,21992341-21992702,21992766-219934... 28 7.3
09_04_0475 - 17913982-17914772,17914830-17915156,17915323-179154... 28 7.3
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 28 7.3
06_01_1013 - 7931756-7935109 28 7.3
05_07_0042 - 27265687-27267159 28 7.3
03_02_0372 + 7864015-7864065,7864167-7864208,7864292-7864322,786... 28 7.3
10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247 28 9.7
10_01_0019 - 228990-229009,229513-229814,229830-230440 28 9.7
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 28 9.7
06_03_1325 - 29334401-29334859,29335163-29335857,29336538-293367... 28 9.7
04_03_0611 - 18011469-18012563,18012756-18012920,18013542-180136... 28 9.7
>11_01_0192 - 1523572-1526097
Length = 841
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 180 SSVQGTFTSSSLRMSSGIHQYRERMRKTEGPQCISDIDCPSGTGCLNYRC-VNPCLVSNP 356
SS TF ++ L +G+ ++R T+G + +D +GT +++ VNPC++
Sbjct: 246 SSDNATFDAADLGEDAGV-RFRRLTLDTDGNLRLYSLDETAGTWSVSWMAFVNPCVIHGV 304
Query: 357 CSENAQCKIVDTMPVKTMVCECLPGY 434
C NA C + P VC C+PGY
Sbjct: 305 CGANAVC-LYSPAP----VCVCVPGY 325
>12_01_0198 - 1461305-1463812
Length = 835
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 180 SSVQGTFTSSSLRMSSGIHQYRERMRKTEGPQCISDIDCPSGTGCLNYRC-VNPCLVSNP 356
SS TF ++ L +G+ R T+G + +D +GT +++ VNPC++
Sbjct: 247 SSDNATFDAADLGEGAGVR--RRLTLDTDGNLRLYSLDEMAGTWSVSWMAFVNPCVIHGV 304
Query: 357 CSENAQCKIVDTMPVKTMVCECLPGY 434
C NA C + P VC C+PGY
Sbjct: 305 CGANAVC-LYSPAP----VCVCVPGY 325
>01_06_0196 - 27410837-27413296
Length = 819
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 336 PCLVSNPCSENAQCKIVDTMPVKTMVCECLPGY----KGNALQECKPYQTVAKCIEG 494
PC C +N C+ + ++ C CLPGY + + + CKP V C +G
Sbjct: 282 PCQAHGLCGKNGLCEYLPSLR-----CSCLPGYEMVDRRDWRRGCKPTFPVGNCSQG 333
>09_02_0533 -
10325681-10326211,10326260-10326328,10326758-10326855,
10326968-10327117,10327848-10327976,10328063-10328999
Length = 637
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 7 CYGLEHRASCRCKIGTVGNPSIACTPIGCRTDTDC--PSDKSCINSKCDTPCNADICQEP 180
C+ + C C G GNP I GC +C P D SC + +TP + IC P
Sbjct: 286 CHAYDLGYKCHCSDGYQGNPYIRG---GCHDIDECKSPQDYSCYGNCNNTP-GSHICDCP 341
>02_05_1157 -
34533625-34533875,34535279-34536340,34536673-34536837,
34536993-34537941
Length = 808
Score = 31.5 bits (68), Expect = 0.79
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 19/98 (19%)
Frame = +3
Query: 291 DCPSGTGCLNYRCV-------NPCLVSNPCSENAQCKIVDTMPVKTMV--------CECL 425
DC T + YRC NP L C++ +C+ +D P + C+C
Sbjct: 287 DCVDSTNGVGYRCKCSNGYDGNPYL-DGGCTDIDECQHLDKYPCHGVCTNLLGGYKCDCP 345
Query: 426 PGYKGNALQ-ECKP---YQTVAKCIEGQGLDFMVNVFL 527
G+ G+A++ +C+P + K + G + ++VF+
Sbjct: 346 HGFSGDAIKNDCRPNDKFTLALKIVTGVSVGVFLSVFM 383
>10_08_0026 -
14253680-14253894,14253981-14254109,14254704-14254769,
14254887-14255133
Length = 218
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 9/77 (11%)
Frame = +1
Query: 37 RCKIGTVGNPSIACTPIGCRTDTDCPSDKSCINSKCD--------TPCNADICQEPAQC- 189
RC + A P T C D +C N + PC A C +C
Sbjct: 59 RCDCDAGWSNMFAFLPASPCTIPKCTFDNACFNITFNFPRGFPLTDPCVAINCGSGGECV 118
Query: 190 KVHLHQAHCACPPGFTN 240
K HCAC PGF N
Sbjct: 119 KEEGLSYHCACSPGFVN 135
>09_06_0281 + 22014394-22015534,22016041-22017056
Length = 718
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 572 VCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVD 688
VC RG+ G+ VAGGC+ D C RC G+C +
Sbjct: 317 VCRCRRGY--GGNPYVAGGCQDIDECKLAGRCY-GECTN 352
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 34 CRCKIGTVGNPSIACTPIGCRTDTDCPSDKSCINSKCDTP 153
CRC+ G GNP +A GC+ +C C +TP
Sbjct: 318 CRCRRGYGGNPYVAG---GCQDIDECKLAGRCYGECTNTP 354
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 34 CRCKIGTVGNPSIACTPIGCRTDTDC--PSDKSCINSKCDTPCNADICQEP 180
CRC G GNP +A GC+ +C P + C +TP A +C+ P
Sbjct: 315 CRCDDGYDGNPYVAG---GCQDINECERPKEHGCFGECTNTP-GAFLCRCP 361
>07_03_0831 -
21810002-21810319,21810423-21810573,21810660-21810897,
21811011-21811221,21811336-21811559,21811696-21811806,
21813265-21813636,21813810-21814782
Length = 865
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 336 PCLVSNPCSENAQCKIVDTMPVKTMVCECLPGYKGNALQE 455
PC N C +NA+C D P +C C G++ + QE
Sbjct: 298 PCHRYNLCGDNAECTADDNEP----ICTCFTGFEPKSPQE 333
>12_02_0882 - 23978169-23979251
Length = 360
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 4 ECYGLEHRASCRCKIGTVGNPSIACTPIGCRTDTDCPSDKSCINSKCDTP 153
ECYG + R C I V ++ +GCR TDC + I + P
Sbjct: 150 ECYGGDERRVGACAIAGVEEDDLSPN-VGCRGVTDCVDESDVIQKQKRKP 198
>04_01_0609 +
7966263-7966366,7967945-7968706,7972607-7972851,
7976940-7977107,7977471-7977734,7977962-7978509
Length = 696
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 34 CRCKIGTVGNPSI--ACTPIG-CRTDTDCPSDKSCINSKCDTPCNADICQ 174
C C G +GNP I C + C ++ C + +C N++ C+ + Q
Sbjct: 353 CNCSEGYIGNPYIPDGCKDVNECENNSICGAGSTCKNTEGSYRCDCNFGQ 402
>12_02_1103 + 26116614-26117607,26118060-26118242,26118344-26119518
Length = 783
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 34 CRCKIGTVGNPSIACTPIGCRTDTDCPSDKSCINSKCDTPCNADICQ 174
C+C G GNP + P GC+ +C K K PC +CQ
Sbjct: 314 CKCSEGYEGNPYL---PKGCQDIDECKLRKEDPKYKELYPCRHGMCQ 357
>04_04_1395 + 33219711-33220629,33220750-33220787
Length = 318
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +2
Query: 494 SRIRLYGECIPCRPAEGRIIDSR--GRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRC 667
+R+ + C+ A +D GR C+ +G+ +G+ +A GC+ C D C
Sbjct: 260 TRVSQWTRCVSVHSAIDDAVDGNLYGRARCNCSKGY--EGNPYLANGCQDCGPCVDGPDC 317
>09_03_0111 -
12440818-12441129,12441242-12441585,12441663-12441989,
12443444-12443602,12443687-12443784,12444745-12444821
Length = 438
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/71 (22%), Positives = 30/71 (42%)
Frame = +2
Query: 554 DSRGRCVCDSERGFIIQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCGINATCDA 733
D +G C G+ +G+ + GC+ + C DN+ C+ CK + +C
Sbjct: 34 DIKGGYRCKCSHGY--EGNPYIKDGCKDINECLDNATY---PCMGICKNTIGSFDCSCYP 88
Query: 734 VGHRSHCTCMP 766
+ + C+P
Sbjct: 89 GSYMKNGFCLP 99
>06_01_0477 + 3404648-3404657,3405385-3405461,3405638-3406501
Length = 316
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 330 HIYN*DILFPKGSLYHLYIVVLQFFSFFPCIGESRRTCAMSL 205
H+ N D L+P+ S HL +LQ+ P I +SR L
Sbjct: 275 HLQNPDPLWPEFSFKHLVWAILQYQRVHPSIEQSRNLAKKQL 316
>02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263
Length = 769
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 390 TMPVKTMVCECLPGYKGNALQE--CKP---YQTVAKCIEGQGLDFMVNVFLV 530
T + + CEC PG GNA QE C P + K + G + + +F++
Sbjct: 337 TNTIGSYTCECRPGTSGNATQENGCLPTDKFTLALKVVTGVSVGVFLLLFML 388
>07_03_1213 + 24921603-24921746,24921923-24922786
Length = 335
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 330 HIYN*DILFPKGSLYHLYIVVLQFFSFFPCIGESRRTCAMSL 205
H+ N D L+P+ S HL +LQ+ P I +SR L
Sbjct: 294 HLQNPDPLWPEFSFKHLVWAILQYQRVHPYIEQSRNLAKKQL 335
>02_04_0542 - 23762549-23762961,23763051-23763453
Length = 271
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +2
Query: 626 GCRTDDNCADNSRCIRGQ--CVDACKAEPCGINATCD 730
GC +D C+ C G C C+A PC + AT D
Sbjct: 29 GCASDQCCSKWGFCGTGSDYCGTGCQAGPCDVPATND 65
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 16 LEHRASCRCKIGTVGNPSIACTPIGCRTDTDCPSDKSCINSKCDTPCNADICQEPAQCKV 195
L+ R +C C G PS+ C + C C KC C+ C E C++
Sbjct: 334 LQGRRTCPC--GKKDYPSLDCDAEAATCGSTCEKVLGCGRHKCPERCHRGSCVE--TCRL 389
Query: 196 HLHQAHCAC 222
+ ++ C C
Sbjct: 390 VITKS-CRC 397
>07_03_0909 +
22512313-22512474,22513151-22513465,22513539-22516633,
22516812-22516910,22517031-22517379
Length = 1339
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +3
Query: 252 MRKTEGPQCISDIDCPSGTGCLNYRCVNPCLVSNPCSENAQCKIVDTMPVKTMVCECL-- 425
MR +E + D P + C L+ + CS Q KI MP++ V
Sbjct: 471 MRSSEASSLLEKNDSPYFINEIELVCSEDSLLGSACSSGWQAKISKKMPLQAAVIGISQN 530
Query: 426 PGYKGNALQECKPYQTVAKC 485
P +G+A + + V C
Sbjct: 531 PAKEGSAFIQLSGGRVVEYC 550
>04_03_0768 -
19396146-19396607,19397855-19398175,19398424-19399569,
19400073-19400855,19402114-19402149
Length = 915
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +2
Query: 524 PCRPAEGRIID---SRGRCVCDSERGFIIQGDKC 616
P +PA +ID R RC ERGF ++GD C
Sbjct: 225 PIQPAISPLIDLGMPRQRCRDFEERGFCLRGDMC 258
>02_05_0039 +
25335690-25335883,25335984-25336131,25337292-25337349,
25337652-25338116,25338435-25338575,25338694-25339934
Length = 748
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 273 QCISDIDCPSGTGCLNYRCVNPCLVSNPCSENAQ 374
+CI D++ GT L YR VN CL+ N C+ Q
Sbjct: 273 ECI-DVNVTHGTQ-LGYRYVNECLLPNYCNGRCQ 304
>01_06_0199 - 27467548-27469992
Length = 814
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 151 PCNAD-ICQEPAQCKVHLHQAHCACPPGF 234
PC A +C + C V+L C+CPPG+
Sbjct: 283 PCQAHGLCGKNGLC-VYLPSLRCSCPPGY 310
>11_08_0022 +
27733247-27733935,27735722-27735981,27736213-27736404,
27737695-27738686
Length = 710
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 327 CVNPCLVSNPC-SENAQCKIVDTMPVKTMVCECLPGYKGN 443
C + V+ C S N+ C V+T + +C+C PGY GN
Sbjct: 269 CSSTSRVAPACVSPNSYC--VNTTNGQGYLCKCSPGYDGN 306
>09_06_0278 +
21991016-21992120,21992341-21992702,21992766-21993459,
21994064-21994191
Length = 762
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 34 CRCKIGTVGNPSIACTPIGCRTDTDC--PSDKSCINSKCDTPCNADICQEP 180
CRC G GNP +A GC+ +C + C +TP A +C+ P
Sbjct: 304 CRCDKGYDGNPYVAG---GCQDINECERAKENGCFGECTNTP-GAFLCRCP 350
>09_04_0475 -
17913982-17914772,17914830-17915156,17915323-17915493,
17915583-17915824,17915862-17916049,17916184-17916253,
17916329-17916612
Length = 690
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +1
Query: 34 CRCKIGTVGNPSIACTPIGCRTDTDCPSDKSCINSKCDTPCNADICQEPAQCKVHLHQAH 213
C+C G GNP + +GCR +C + + PC A IC+ +
Sbjct: 241 CKCSKGFDGNPYVKDGLLGCRDINECLDNTT-------YPC-AGICENT------IGSYK 286
Query: 214 CACPPG 231
C+CP G
Sbjct: 287 CSCPQG 292
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Frame = +2
Query: 551 IDSRGRCVCDSERGFI------IQGDKCVAGGCRTDDNCADNSRCIRGQCVDACKAEPCG 712
I + RCV D + G+ +G+ V GC+ + C DN+ C CK
Sbjct: 279 ISGKSRCVDDPKGGYRCKCSDGYEGNPYVKDGCKDINECLDNATY---PCPGICKNTLGN 335
Query: 713 INATCDAVGHRSHCTCMP 766
+C + + C+P
Sbjct: 336 FTCSCYPGNYMMNGICIP 353
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +3
Query: 282 SDIDCPSGTGCLNYRCVNPCLVSNPCSENA--QCKIVDTMP-VKTMVCECLPGY 434
+ I P G C + CLV PC A QC D P V ++ EC+ G+
Sbjct: 572 TSIPPPLPCGTPTPSCPHQCLVPQPCGHPATHQCHFGDCPPCVVPVMRECIGGH 625
>05_07_0042 - 27265687-27267159
Length = 490
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 189 ALSWFLANICIAGR-ITFGIDT*FIRWTICVSSAANGSASYRWVSNCTDLT 40
AL+ F+ AGR +TF ++ F+ W + V++ + W+ C+ L+
Sbjct: 99 ALAEFIDGQADAGRPVTFVVNNIFVPWALDVAAGMGIPCAMLWIQPCSVLS 149
>03_02_0372 +
7864015-7864065,7864167-7864208,7864292-7864322,
7864472-7864653
Length = 101
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 139 KCDTPCNADICQEPAQCKVHLHQAHCACPPGFTNTGKE 252
KCD C+A QEP ++ C C P T+ KE
Sbjct: 46 KCDYRCSATKRQEPCLKYCNICCQKCLCVPSGTSGNKE 83
>10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247
Length = 722
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/72 (29%), Positives = 27/72 (37%)
Frame = +1
Query: 34 CRCKIGTVGNPSIACTPIGCRTDTDCPSDKSCINSKCDTPCNADICQEPAQCKVHLHQAH 213
C+C GNP IA GC+ +C + PC++D CK
Sbjct: 310 CKCSDHYDGNPYIAD---GCQDIDECQLRIQFPELRDVYPCSSD-----GICKNRPGGYD 361
Query: 214 CACPPGFTNTGK 249
C C PG GK
Sbjct: 362 CPCKPGMKGDGK 373
>10_01_0019 - 228990-229009,229513-229814,229830-230440
Length = 310
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 360 SENAQCKIVDTMPVKTMVCECLPGYKGN 443
S+N++C V++ C CLPGY GN
Sbjct: 265 SDNSEC--VNSTNGPGYFCRCLPGYHGN 290
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +3
Query: 456 CKPYQTVAKCIEGQGLDFMVNVFLVDQQKDVL*ILGVDAFVTRNV 590
C+P QT ++G+ +DF+ L D + + + + DA V ++
Sbjct: 425 CRPLQTQKDKVQGETVDFLPQNMLPDVKVEEMDLTKTDAHVPEDI 469
>06_03_1325 -
29334401-29334859,29335163-29335857,29336538-29336750,
29338791-29339472,29339781-29340020
Length = 762
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +1
Query: 7 CYGLEHRASCRCKIGTVGNPSI--ACTPIG-CRTDTD-CPSDKSCIN 135
C G C C G GNP + CT I C D CP C N
Sbjct: 281 CVGTADGYVCNCTSGYKGNPYLPGGCTDIDVCAPGNDGCPDGMICSN 327
>04_03_0611 -
18011469-18012563,18012756-18012920,18013542-18013639,
18014541-18015498
Length = 771
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 LVSNPC-SENAQCKIVDTMPVKTMVCECLPGYKGN 443
L S C S+NA+C +++ +C C GY+GN
Sbjct: 277 LTSYACKSDNAKC--INSSDTTGYICRCQEGYQGN 309
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,162,380
Number of Sequences: 37544
Number of extensions: 565119
Number of successful extensions: 1424
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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