Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30501
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.2  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   3.2  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    23   4.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   4.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.6  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   5.6  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   7.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   9.8  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   9.8  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   9.8  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 302 RRAVYITYTLWSFSFSHSFPVLV 234
           RRA  +  T+W  SF   FP LV
Sbjct: 180 RRARLLVATVWILSFVICFPPLV 202


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 52   TVGNPSIACTPIGCRTDTDCP 114
            T G   +   PI C+T+ D P
Sbjct: 1160 TSGGDGVKSAPIHCQTEQDAP 1180


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 341 AWVDTSIIKTSCSR-RAVYITYTLWSFSFSHSFPVLVNPGGH 219
           AWV   + K    R R + I   LW F  S  +  +++  GH
Sbjct: 57  AWV---LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 95


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 299 RAVYITYTLWSFSFSHSFPVLVNPGGH 219
           R + I   LW F  S  +  +++  GH
Sbjct: 12  RGITIDIALWKFETSKYYVTIIDAPGH 38


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +3

Query: 309 GCLNY--RCVNPCLVSNPCSENAQCKIV 386
           GC  +  R +   +   PC++N QC I+
Sbjct: 86  GCKGFFRRSIQQKIQYRPCTKNQQCSIL 113


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 683 VDACKAEPCGINATCDAVGHRSHCTCM 763
           +D C ++ CGI   C+   + +   C+
Sbjct: 79  IDPCASKYCGIGKECELSPNSTIAVCV 105


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 494 TFDAFSNSLIWLAF 453
           TFD F N+ +W  F
Sbjct: 118 TFDVFYNTAVWARF 131


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 276 CISDIDCPSGTGCLNYRCVN 335
           C  ++ CP+G  C N R  N
Sbjct: 755 CDCEMTCPAGCKCYNDRTWN 774


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 494 TFDAFSNSLIWLAF 453
           TFD F N+ +W  F
Sbjct: 118 TFDVFYNTAVWARF 131


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = -3

Query: 312 ILFPKGSLYHLYIVVLQFFSFFPCIGESRRTCAMSLM*MYLALSWFLANICIA 154
           + FP  +L  L  ++    SFF C G  R +  M++      L   L  I +A
Sbjct: 48  LAFPSITLIVLGSIIF-VISFFGCCGAIRESHCMTITFASFLLFILLVQIAVA 99


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 341 AWVDTSIIKTSCSR-RAVYITYTLWSFSFSHSFPVLVNPGGH 219
           AWV   + K    R R + I   LW F  +  +  +++  GH
Sbjct: 57  AWV---LDKLKAERERGITIDIALWKFETAKYYVTIIDAPGH 95


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -1

Query: 701 QLCRHLHIDRECIANYLR 648
           ++   LH+   CI N+L+
Sbjct: 88  EIAEKLHVSHTCIENHLK 105


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -2

Query: 781 DFQCSRHASAMRAMPHRITGCVNTTRLSFAGIYTLT 674
           D   S    A  + P RIT   NT+RL  + I   T
Sbjct: 77  DHDDSDEEYAANSQPPRITSVPNTSRLDKSEISLAT 112


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 324 RCVNPCLVSNPCSENAQCKIV 386
           R +   +   PC++N QC I+
Sbjct: 44  RSIQQKIQYRPCTKNQQCSIL 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,002
Number of Sequences: 438
Number of extensions: 5655
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)