Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30498X
         (415 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    44   0.002
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   0.57 
UniRef50_Q8T107 Cluster: Putative uncharacterized protein Bmhig;...    33   2.3  
UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:...    31   9.3  
UniRef50_A4HVH2 Cluster: Chromosome 13; n=3; Leishmania|Rep: Chr...    31   9.3  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 43.6 bits (98), Expect = 0.002
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -2

Query: 414 LLRCVDELTAHLVLSGYWSP 355
           LLR VDELTAHLVLSGYWSP
Sbjct: 156 LLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 0.57
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 225 WYLPVRTHKRSYHQ 184
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q8T107 Cluster: Putative uncharacterized protein Bmhig;
           n=1; Bombyx mori|Rep: Putative uncharacterized protein
           Bmhig - Bombyx mori (Silk moth)
          Length = 786

 Score = 33.1 bits (72), Expect = 2.3
 Identities = 23/54 (42%), Positives = 29/54 (53%)
 Frame = -3

Query: 167 NFAGXIFIARCYSFTVEANREHLLSTYFIRKIGTRLRESNTGASLDTNAPDVLS 6
           N+ G +  +   +   + NR  LLSTYFIR           GASL+TNAPD LS
Sbjct: 368 NWVGPLCASTPGNVYFKFNRGRLLSTYFIRN----------GASLNTNAPDDLS 411


>UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:
           ENBP1 protein - Medicago truncatula (Barrel medic)
          Length = 1701

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 66  GTNFSNEIRTQQMFTIGFHGEGITSCNKNXTRKIIICVITGGRTSCESARVGTTAPPISA 245
           G + + E R + +  +   G    S  KN  +K  + ++T G T C SA VGTT   +  
Sbjct: 293 GVSINEEARGEALKPLAKRGRPKGS--KNKIKKKEVDLVTNGETVCGSANVGTTVEILET 350

Query: 246 VK 251
            K
Sbjct: 351 EK 352


>UniRef50_A4HVH2 Cluster: Chromosome 13; n=3; Leishmania|Rep:
            Chromosome 13 - Leishmania infantum
          Length = 2930

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -1

Query: 286  RLPHPS-NRNAFCFTAEIGGAVVPTRADSQEVLPPVITQIIILRVXFLLHDVIPSPWKPI 110
            R P+PS  R     +  +GGA+ P    S  V PP+ TQ+   +V      V P P  P+
Sbjct: 1728 RSPYPSLYRQQRTTSVAVGGAITPF---STSVPPPLSTQVTRSKVPIYRPPVPPPPIPPV 1784

Query: 109  V 107
            V
Sbjct: 1785 V 1785


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,811,628
Number of Sequences: 1657284
Number of extensions: 9592810
Number of successful extensions: 19470
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19467
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)