Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30498X
         (415 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0501 - 6558120-6559312,6559441-6559518,6559818-6559877,656...    27   4.5  
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749...    27   7.8  

>04_01_0501 -
           6558120-6559312,6559441-6559518,6559818-6559877,
           6560000-6560083,6560407-6560566
          Length = 524

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 75  FSNEIRTQQMFTIGFHGEGITSCNKNXTRKIIICVITGGR 194
           F+ E+ +  +  +G HG G+T+C    T  +++ ++  GR
Sbjct: 400 FAREVNSYDVM-VGVHGAGLTNCVFLPTGAVLLQIVPYGR 438


>02_05_1052 + 33770355-33773981,33774217-33774336,33774880-33774996,
            33775322-33775411,33775971-33776078,33776304-33776351
          Length = 1369

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 272  FKPKRILLHGRNRRGGGTYPCGLTRGPTTSNYANY 168
            F P+R+    RNR      PC  TR  + S+  +Y
Sbjct: 1126 FTPRRMPSPSRNRPSTPVSPCSSTRSDSASSILSY 1160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,400,773
Number of Sequences: 37544
Number of extensions: 289872
Number of successful extensions: 581
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)