Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30498X
         (415 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY226549-1|AAO47375.1|  306|Drosophila melanogaster pickpocket 2...    29   2.4  
AE014297-4404|AAF56909.3|  550|Drosophila melanogaster CG12048-P...    29   2.4  
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    28   5.6  

>AY226549-1|AAO47375.1|  306|Drosophila melanogaster pickpocket 21
           protein.
          Length = 306

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 312 VLRYQYSHNG-CPTLQTETHSASRQK*AGRWYLPVRT 205
           V+ YQ++  G C    TE   ASRQK     Y P+RT
Sbjct: 184 VIEYQFTEAGLCFVFNTEISPASRQKAREDKYYPLRT 220


>AE014297-4404|AAF56909.3|  550|Drosophila melanogaster CG12048-PA
           protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 312 VLRYQYSHNG-CPTLQTETHSASRQK*AGRWYLPVRT 205
           V+ YQ++  G C    TE   ASRQK     Y P+RT
Sbjct: 227 VIEYQFTEAGLCFVFNTEISPASRQKAREDKYYPLRT 263


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1830

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 331 PHTLRYSSKVSV*SQRLPHPSNRNAFCFTAEI 236
           P++   SS  S  +Q+LP PS+RNA   T+ +
Sbjct: 499 PNSENASSSTSPPTQQLPRPSSRNASASTSAV 530


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,026,239
Number of Sequences: 53049
Number of extensions: 478294
Number of successful extensions: 1097
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)