Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30497
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119240-1|AAM51100.1|  362|Drosophila melanogaster SD19562p pro...    94   2e-19
AE014298-2216|AAF48508.2|  362|Drosophila melanogaster CG8288-PA...    94   2e-19

>AY119240-1|AAM51100.1|  362|Drosophila melanogaster SD19562p
           protein.
          Length = 362

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 40/73 (54%), Positives = 55/73 (75%)
 Frame = +3

Query: 558 KYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRV 737
           K GCILVG+E  +P+++TK+Y GIF + G+LPK++L RF+VSPE+ L  GTPL   HFRV
Sbjct: 154 KRGCILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAPGTPLNVNHFRV 213

Query: 738 GDCIDIRSNVNDY 776
           GD +D+R    D+
Sbjct: 214 GDFVDVRGKTVDH 226



 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 43/85 (50%), Positives = 53/85 (62%)
 Frame = +1

Query: 256 ENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGLIARKIGNYPLWC 435
           ENKQF+ EV  +       + K  L             WTP  +R G+IARKIG YPLW 
Sbjct: 57  ENKQFVNEVGTNNFGVPVVI-KDCLVKTA-GPTANEAVWTPNLRRCGVIARKIGQYPLWL 114

Query: 436 KDGKKVSTTLLQVVDNHVIKYIPPE 510
           K+G+++ TTLLQ+VDNHVIKYIPPE
Sbjct: 115 KNGERIRTTLLQIVDNHVIKYIPPE 139


>AE014298-2216|AAF48508.2|  362|Drosophila melanogaster CG8288-PA
           protein.
          Length = 362

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 40/73 (54%), Positives = 55/73 (75%)
 Frame = +3

Query: 558 KYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRV 737
           K GCILVG+E  +P+++TK+Y GIF + G+LPK++L RF+VSPE+ L  GTPL   HFRV
Sbjct: 154 KRGCILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAPGTPLNVNHFRV 213

Query: 738 GDCIDIRSNVNDY 776
           GD +D+R    D+
Sbjct: 214 GDFVDVRGKTVDH 226



 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 41/85 (48%), Positives = 54/85 (63%)
 Frame = +1

Query: 256 ENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGLIARKIGNYPLWC 435
           ENKQF+ EV  +       ++   + +           WTP  +R G+IARKIG YPLW 
Sbjct: 57  ENKQFVNEVGTNNFGVPAVIKDSLVKTA--GPTANEAVWTPNLRRCGVIARKIGQYPLWL 114

Query: 436 KDGKKVSTTLLQVVDNHVIKYIPPE 510
           K+G+++ TTLLQ+VDNHVIKYIPPE
Sbjct: 115 KNGERIRTTLLQIVDNHVIKYIPPE 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,794,847
Number of Sequences: 53049
Number of extensions: 767302
Number of successful extensions: 1637
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)