Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30497
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13875-9|AAA21160.3|  403|Caenorhabditis elegans Hypothetical pr...    52   6e-07
AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical ...    31   1.2  
AC006792-1|AAF60741.2|  642|Caenorhabditis elegans Hypothetical ...    30   2.2  
Z99281-4|CAB16509.1|  571|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U41037-2|AAA82388.3|  651|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z92827-5|CAB07325.1|  732|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>U13875-9|AAA21160.3|  403|Caenorhabditis elegans Hypothetical
           protein C26E6.6 protein.
          Length = 403

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
 Frame = +1

Query: 304 QTALEKKALTSPIL---NDVKKNVTWTP---QTKRVGLIARKIGNYPLWCKDGKKVSTTL 465
           +T +EK+ L +  +   N  + NV+       ++RVGL+ RKIG  P W  +G ++  T+
Sbjct: 68  ETVIEKETLAASTIAFQNSQETNVSVVDIPDSSRRVGLVVRKIGMLPQWTNEGNRILCTV 127

Query: 466 LQVVDNHVIKYIPPE 510
           L+V +NHV+    PE
Sbjct: 128 LEVDENHVVSITSPE 142



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +3

Query: 570 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPN-GTPLYATHFRVGDC 746
           + VGA N DP+  T  Y   F   G+  K  L  F+V+ E ALP+ G PL A HF VG  
Sbjct: 165 VTVGAGNDDPTKYTLGYRRQFVRAGIPVKEKLGCFLVT-EDALPSAGQPLDARHFGVGQY 223

Query: 747 IDIRSNVNDY 776
           +       D+
Sbjct: 224 VTATGKTIDW 233


>AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical
           protein Y64G10A.1 protein.
          Length = 302

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 626 NI*QCWNAAKKAPLQICCITRICFTKWHS 712
           N   C NA K AP + CC T   +T+W S
Sbjct: 99  NFFHCTNATKSAPAKRCCPTGGVWTEWSS 127


>AC006792-1|AAF60741.2|  642|Caenorhabditis elegans Hypothetical
           protein Y50C1A.1 protein.
          Length = 642

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 450 GIHNSVTGC*QSCYQIYTSGEYKPMIKSNVKWVE---KQKYGCILVGAEN 590
           G+H+      ++ Y++ T+G  K  I+   KWVE    Q  G  L  +EN
Sbjct: 146 GVHDRQLSLRETLYELLTNGARKEAIRRRWKWVENHMNQSNGLALTLSEN 195


>Z99281-4|CAB16509.1|  571|Caenorhabditis elegans Hypothetical
           protein Y57G11C.7 protein.
          Length = 571

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 563 ILLFLYPFYIRFYHRFVFSG 504
           + L  YPF+I+ YH F F+G
Sbjct: 306 VFLIAYPFFIKVYHIFSFNG 325


>U41037-2|AAA82388.3|  651|Caenorhabditis elegans Hypothetical
           protein T24C12.3 protein.
          Length = 651

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = +3

Query: 525 IKSNVKWVEKQKYGCILVGAENIDPSVVTK--DYCGIFDSVGMLPKRHLCRFVVSPESAL 698
           I   V+++E     CI+ G EN+ PS  T+  D    F +  +    HL +   S    L
Sbjct: 175 IPKTVEYLETHSVNCIVYGQENVFPSFFTRTSDRKAQFCTESLEEVVHLLK--TSKSLGL 232

Query: 699 PNGTPL 716
           P GT L
Sbjct: 233 PYGTIL 238


>Z92827-5|CAB07325.1|  732|Caenorhabditis elegans Hypothetical
           protein C29F7.6 protein.
          Length = 732

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +3

Query: 312 IRKKSIDLSHFKRCQ-KKCNMD 374
           I   S++LSH +RCQ KKC  D
Sbjct: 684 IEDASVELSHVERCQGKKCKRD 705


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,495,367
Number of Sequences: 27780
Number of extensions: 422238
Number of successful extensions: 1178
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)