BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30496 (704 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 102 1e-20 UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 94 3e-18 UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 88 2e-16 UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 87 4e-16 UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 82 1e-14 UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 81 2e-14 UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 79 1e-13 UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 78 2e-13 UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 72 2e-11 UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 70 6e-11 UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 69 1e-10 UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 62 1e-08 UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08 UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 58 2e-07 UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 57 4e-07 UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 55 2e-06 UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 54 3e-06 UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 50 4e-05 UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 42 0.020 UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.14 UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3; Bacill... 36 1.3 UniRef50_A6PBF3 Cluster: Diguanylate cyclase precursor; n=1; She... 35 2.2 UniRef50_Q17A66 Cluster: Mixed-lineage leukemia protein, mll; n=... 35 2.2 UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|... 34 3.0 UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 33 5.2 UniRef50_A3SK38 Cluster: Putative ABC transport system, permease... 33 9.0 UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putati... 33 9.0 >UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens (Human) Length = 211 Score = 102 bits (244), Expect = 1e-20 Identities = 46/76 (60%), Positives = 52/76 (68%) Frame = +2 Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211 N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65 Query: 212 YHTKVRAGRGFTLREL 259 YHTKVRAGRGF+L EL Sbjct: 66 YHTKVRAGRGFSLEEL 81 Score = 100 bits (240), Expect = 3e-20 Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%) Frame = +1 Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441 AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143 Query: 442 RKLATQLRGPLMPVQ 486 KLATQL GP+MPV+ Sbjct: 144 LKLATQLTGPVMPVR 158 Score = 52.8 bits (121), Expect = 8e-06 Identities = 29/45 (64%), Positives = 34/45 (75%) Frame = +3 Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644 R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209 >UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal protein L13; n=1; Tribolium castaneum|Rep: PREDICTED: similar to 60S ribosomal protein L13 - Tribolium castaneum Length = 198 Score = 93.9 bits (223), Expect = 3e-18 Identities = 44/80 (55%), Positives = 52/80 (65%) Frame = +2 Query: 20 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 199 M + NNMIPNGHFHK WQ+ VK WFNQP ++ RRK R LRP+V C Sbjct: 1 MVRHNNMIPNGHFHKKWQQKVKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHC 59 Query: 200 PTVRYHTKVRAGRGFTLREL 259 P+ RY +KVRAGRGFT +EL Sbjct: 60 PSERYKSKVRAGRGFTFQEL 79 Score = 63.7 bits (148), Expect = 4e-09 Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%) Frame = +1 Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK-KVLK 420 AG++ +AR+ G+AVDPRRRN+ ES+ N+QR+ EY++RLI P K KVLK Sbjct: 82 AGMSDKYARSFGVAVDPRRRNRCTESIAANIQRLIEYKSRLIFLPDSKNKVLK 134 >UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viridiplantae|Rep: 60S ribosomal protein L13-3 - Arabidopsis thaliana (Mouse-ear cress) Length = 206 Score = 88.2 bits (209), Expect = 2e-16 Identities = 40/78 (51%), Positives = 50/78 (64%) Frame = +2 Query: 26 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 205 K NN+IP+ HF K WQ +VKTWFNQPAR+ RR+ R LRP+V T Sbjct: 2 KHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQT 61 Query: 206 VRYHTKVRAGRGFTLREL 259 ++Y+ KVRAG+GFTL EL Sbjct: 62 LKYNMKVRAGKGFTLEEL 79 Score = 75.8 bits (178), Expect = 1e-12 Identities = 36/74 (48%), Positives = 54/74 (72%), Gaps = 1/74 (1%) Frame = +1 Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441 AG+ A TIGI+VD RR+N+S+E LQ NVQR+K Y+A+L++FP + ++V G++ EE Sbjct: 82 AGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEE 141 Query: 442 RKLATQLRGPLMPV 483 ATQ++G MP+ Sbjct: 142 LANATQVQGDYMPI 155 >UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago maydis (Smut fungus) Length = 209 Score = 87.0 bits (206), Expect = 4e-16 Identities = 39/78 (50%), Positives = 50/78 (64%) Frame = +2 Query: 26 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 205 K NN++ N HF KDWQR VK WF+QP + RR+ R LRP VRCPT Sbjct: 4 KHNNILHNNHFRKDWQRRVKVWFDQPGAKKRRRTAR-EAKAAKLGLRPVQLLRPAVRCPT 62 Query: 206 VRYHTKVRAGRGFTLREL 259 +RY+TK+R+GRGFT+ E+ Sbjct: 63 LRYNTKIRSGRGFTIEEV 80 Score = 66.1 bits (154), Expect = 8e-10 Identities = 30/47 (63%), Positives = 39/47 (82%) Frame = +1 Query: 262 AAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 402 AAGL +AR++GI VD RRRNKS ESL++NV+RIK Y+ARL++ PK Sbjct: 82 AAGLGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQARLVVIPK 128 >UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7; Trypanosomatidae|Rep: 60S ribosomal protein L13, putative - Trypanosoma brucei Length = 229 Score = 81.8 bits (193), Expect = 1e-14 Identities = 42/69 (60%), Positives = 51/69 (73%), Gaps = 1/69 (1%) Frame = +1 Query: 262 AAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEE 438 AAG+ P +ARTIGI VD RR+NKS E + INVQR+K Y ++L+LFP KK KG+A EE Sbjct: 98 AAGVKPRYARTIGIRVDRRRKNKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATEE 157 Query: 439 ERKLATQLR 465 E K ATQ R Sbjct: 158 EVKAATQDR 166 Score = 68.1 bits (159), Expect = 2e-10 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 6/86 (6%) Frame = +2 Query: 20 MGKGNNMIPNGHFHKDWQRF------VKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXL 181 M KGNN IP+ H K W VK +FNQPA++ RR++ R+ L Sbjct: 12 MPKGNNAIPHVHQRKHWNPCSSQKGNVKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-L 70 Query: 182 RPIVRCPTVRYHTKVRAGRGFTLREL 259 RP V CPTVRY+ K R GRGF+L EL Sbjct: 71 RPQVNCPTVRYNMKRRLGRGFSLEEL 96 >UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13 - Trichomonas vaginalis G3 Length = 210 Score = 81.4 bits (192), Expect = 2e-14 Identities = 40/82 (48%), Positives = 47/82 (57%) Frame = +2 Query: 14 VKMGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIV 193 ++M NN IPN H K W VKT+F+ PAR RR+ R LRPIV Sbjct: 20 LEMVAKNNQIPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIV 79 Query: 194 RCPTVRYHTKVRAGRGFTLREL 259 RCPTVRY+ K R GRGFT +EL Sbjct: 80 RCPTVRYNMKTRLGRGFTPKEL 101 Score = 48.0 bits (109), Expect = 2e-04 Identities = 24/51 (47%), Positives = 33/51 (64%) Frame = +1 Query: 262 AAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKV 414 AAG +P AR GIAVD RR + ++ NV+R++ Y+ARLI KG+ V Sbjct: 103 AAGFDPALARFQGIAVDARRAHSKDAMVKQNVERLQAYKARLIKVKKGETV 153 >UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2; Cryptosporidium|Rep: 60S ribosomal protein L13, putative - Cryptosporidium parvum Iowa II Length = 207 Score = 79.0 bits (186), Expect = 1e-13 Identities = 37/76 (48%), Positives = 48/76 (63%) Frame = +2 Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211 NN+IPN H+HK+++R++KTW+NQP R+ R+ R LRPIV PT R Sbjct: 4 NNVIPNVHYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQR 62 Query: 212 YHTKVRAGRGFTLREL 259 Y+ K R GRGFTL EL Sbjct: 63 YNMKTRLGRGFTLEEL 78 Score = 54.0 bits (124), Expect = 3e-06 Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%) Frame = +1 Query: 262 AAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEA 429 A G+N A +IGIAVD RR + S E+ QINV R+K+Y ++L P KGKK KG A Sbjct: 80 ACGINKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYINGIVLQPRKGKKTKKGFA 136 >UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/Metazoa group|Rep: 60S ribosomal protein L13 - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181)) Length = 243 Score = 77.8 bits (183), Expect = 2e-13 Identities = 35/68 (51%), Positives = 46/68 (67%) Frame = +2 Query: 56 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 235 FHKDWQR V+ F+QP R++RR++ R+ LRP+VRCPTV+Y+ +VR G Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVG 89 Query: 236 RGFTLREL 259 RGFTL EL Sbjct: 90 RGFTLAEL 97 Score = 59.3 bits (137), Expect = 9e-08 Identities = 29/46 (63%), Positives = 35/46 (76%) Frame = +1 Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 402 AG+ ART+GIAVD RR N S ESL NV R+K+Y+ARLILFP+ Sbjct: 100 AGIPKKLARTVGIAVDHRRVNYSKESLVANVARLKDYKARLILFPR 145 >UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5; Plasmodium|Rep: 60S ribosomal protein L13, putative - Plasmodium chabaudi Length = 215 Score = 71.7 bits (168), Expect = 2e-11 Identities = 43/118 (36%), Positives = 60/118 (50%) Frame = +2 Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211 NN++PN H HK WQR+V+ FN+ +R +R+ R L P+V CPT R Sbjct: 5 NNVLPNVHLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQR 63 Query: 212 YHTKVRAGRGFTLRELGPQD*TQYLPERLGLL*IPVDATSLLNHCKSMFKE*RNTERV 385 Y+ K R G+GFTL E+ T +G++ VD N C+ KE N ER+ Sbjct: 64 YNYKTRLGKGFTLEEIKAVKLTPSAARSIGII---VDKRR-KNRCEESLKE--NAERL 115 Score = 46.4 bits (105), Expect = 7e-04 Identities = 22/49 (44%), Positives = 32/49 (65%) Frame = +1 Query: 262 AAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK 408 A L P AR+IGI VD RR+N+ ESL+ N +R+++Y L++ P K Sbjct: 81 AVKLTPSAARSIGIIVDKRRKNRCEESLKENAERLQKYLNSLVMIPLKK 129 >UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohymenophorea|Rep: 60S ribosomal protein L13 - Paramecium tetraurelia Length = 208 Score = 69.7 bits (163), Expect = 6e-11 Identities = 34/78 (43%), Positives = 46/78 (58%) Frame = +2 Query: 26 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 205 K N +PN H K W RFVKT++NQPA + RR+Q R LRP+VR T Sbjct: 2 KHNQQLPNAHMRKHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQT 60 Query: 206 VRYHTKVRAGRGFTLREL 259 ++Y++ + GRGF+L EL Sbjct: 61 IKYNSVQKLGRGFSLIEL 78 Score = 62.9 bits (146), Expect = 7e-09 Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 5/84 (5%) Frame = +1 Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK--GKK---VLKGEA 429 AGLN FART+GI+VD RRRN + E L NV+R+K Y ++L+L+P+ GK V+K Sbjct: 81 AGLNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSKLVLYPRVAGKPKNGVVKDST 140 Query: 430 NEEERKLATQLRGPLMPVQQPAPK 501 NE Q P + Q PK Sbjct: 141 NEVVAHPVAQNTNPEVLTFQRTPK 164 >UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomycota|Rep: 60S ribosomal protein L13 - Candida albicans (Yeast) Length = 202 Score = 68.5 bits (160), Expect = 1e-10 Identities = 33/71 (46%), Positives = 43/71 (60%) Frame = +2 Query: 47 NGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 226 N HF K WQ V+ F+Q ++ R+Q+R+ LRP+VR PTV+Y+ KV Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKV 69 Query: 227 RAGRGFTLREL 259 RAGRGFTL EL Sbjct: 70 RAGRGFTLAEL 80 Score = 68.5 bits (160), Expect = 1e-10 Identities = 36/81 (44%), Positives = 53/81 (65%) Frame = +1 Query: 262 AAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEE 441 A G+ P +ARTIGI+VD RR+NKS E+ NV R++EY+++L++F K K + + E+ Sbjct: 82 AVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQV 141 Query: 442 RKLATQLRGPLMPVQQPAPKS 504 AT PV+QPAP+S Sbjct: 142 DVSAT------FPVEQPAPES 156 >UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4; Piroplasmida|Rep: 60S ribosomal protein L13e, putative - Theileria parva Length = 205 Score = 62.5 bits (145), Expect = 1e-08 Identities = 29/55 (52%), Positives = 38/55 (69%) Frame = +1 Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA 429 AGL AR++G+AVD RR NK ESL +NV R+K Y ++L+LFP+ K KG A Sbjct: 82 AGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFA 136 Score = 54.8 bits (126), Expect = 2e-06 Identities = 33/80 (41%), Positives = 43/80 (53%) Frame = +2 Query: 20 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 199 M K NNM+ + H K RFVK NQ ++ RR+ R LRP+V Sbjct: 1 MVKHNNMLSDVHRVKCSHRFVKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHM 59 Query: 200 PTVRYHTKVRAGRGFTLREL 259 P+ RY+ K+R GRGFTL+EL Sbjct: 60 PSRRYNYKLRFGRGFTLQEL 79 >UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; Schizosaccharomyces pombe|Rep: Putative uncharacterized protein - Schizosaccharomyces pombe (Fission yeast) Length = 70 Score = 59.7 bits (138), Expect = 7e-08 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = +2 Query: 41 IPNGHFHKDWQRFVKTWFNQPARRYRRK 124 +PN HFHKDWQR+VKTWFNQP R+ RR+ Sbjct: 12 LPNAHFHKDWQRYVKTWFNQPGRKLRRQ 39 >UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia theta|Rep: 60S ribosomal protein L13 - Guillardia theta (Cryptomonas phi) Length = 127 Score = 58.4 bits (135), Expect = 2e-07 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Frame = +2 Query: 50 GHFHKDWQRFVKTWFNQPARRY-RRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 226 GHF K W+ V T FNQP + RRK + L+P+V+CPT ++TK+ Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKI 69 Query: 227 RAGRGFTLREL 259 + GRGF+++E+ Sbjct: 70 KLGRGFSIQEI 80 >UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba histolytica|Rep: 60S ribosomal protein L13 - Entamoeba histolytica Length = 138 Score = 57.2 bits (132), Expect = 4e-07 Identities = 30/83 (36%), Positives = 42/83 (50%) Frame = +2 Query: 56 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 235 F KDW+ V TW QP R+ RR Q R+ L+P V C R++ K+R G Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRV-EKAKSVFPATIKSLKPSVHCMNQRFNYKLRLG 70 Query: 236 RGFTLRELGPQD*TQYLPERLGL 304 RGF+L+EL + L +G+ Sbjct: 71 RGFSLKELRAAKIDKNLARTIGI 93 Score = 48.8 bits (111), Expect = 1e-04 Identities = 26/52 (50%), Positives = 32/52 (61%) Frame = +1 Query: 262 AAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVL 417 AA ++ ARTIGIAVDPRR+ S E L N QR+ EY RL L K++ Sbjct: 80 AAKIDKNLARTIGIAVDPRRKESSKECLTRNAQRLTEYMNRLCLKSVSVKIV 131 >UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1; Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry - Rattus norvegicus Length = 173 Score = 54.8 bits (126), Expect = 2e-06 Identities = 22/27 (81%), Positives = 25/27 (92%) Frame = +2 Query: 179 LRPIVRCPTVRYHTKVRAGRGFTLREL 259 +RPIVRCPTVRYHTKVR GRGF+L E+ Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEI 39 Score = 41.9 bits (94), Expect = 0.015 Identities = 20/61 (32%), Positives = 37/61 (60%) Frame = +1 Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEER 444 AG++ ARTI I+VDP+++ K E + +R+ E + I++PK +K + + +E + Sbjct: 42 AGIHKKMARTIDISVDPKKKKKKKERKKEKNERVTETNQKDIIYPKREKEREKKGMKEGK 101 Query: 445 K 447 K Sbjct: 102 K 102 >UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal protein L13 isoform 4; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ribosomal protein L13 isoform 4 - Canis familiaris Length = 102 Score = 54.0 bits (124), Expect = 3e-06 Identities = 22/30 (73%), Positives = 23/30 (76%) Frame = +2 Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRR 121 N MI HFHKDWQR V TWFNQPAR+ RR Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRR 35 >UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13 - Encephalitozoon cuniculi Length = 163 Score = 50.4 bits (115), Expect = 4e-05 Identities = 27/77 (35%), Positives = 36/77 (46%) Frame = +2 Query: 26 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 205 KGN+ +PN HF K + + P + R + LRPIVRCPT Sbjct: 2 KGNHALPNNHFRKTSLKI--RIHHDPETKARVMAEKKLRKAKALFPMPLKKLRPIVRCPT 59 Query: 206 VRYHTKVRAGRGFTLRE 256 ++Y+ R GRGFT E Sbjct: 60 IKYNRNERLGRGFTAAE 76 Score = 45.2 bits (102), Expect = 0.002 Identities = 30/78 (38%), Positives = 43/78 (55%) Frame = +1 Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEER 444 AGL+ AR +GIAVD RRR+ + E+ NV+RIK Y ++ ++ K EA E Sbjct: 80 AGLDYRHARRLGIAVDLRRRDTNQEAFDKNVERIKTYLGKITIYESVK-----EARESGA 134 Query: 445 KLATQLRGPLMPVQQPAP 498 K T+ +MP +P P Sbjct: 135 KPYTK---EIMPFVKPKP 149 >UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1; Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA sequence - Ostreococcus tauri Length = 527 Score = 41.5 bits (93), Expect = 0.020 Identities = 20/34 (58%), Positives = 21/34 (61%) Frame = -3 Query: 258 NSRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 157 NS V P P R L YR VG TIGR+ PA GRG Sbjct: 410 NSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443 >UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza sativa|Rep: 60S ribosomal protein L13 - Oryza sativa subsp. indica (Rice) Length = 138 Score = 38.7 bits (86), Expect = 0.14 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +2 Query: 185 PIVRCPTVRYHTKVRAGRGFTLREL 259 PIV+C T++Y+ K RAGRGF L EL Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEEL 71 >UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3; Bacillus|Rep: Polyketide synthase type I - Bacillus amyloliquefaciens Length = 1917 Score = 35.5 bits (78), Expect = 1.3 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 5/59 (8%) Frame = +1 Query: 352 NVQRIKEYRARLILF-----PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVED 513 N +R+KEY ARL++F P+G L + + + +L LRG L V A SV+D Sbjct: 895 NPERLKEYAARLLMFLKDEAPEGSGPLYDKIDTMQNQLEDALRGVLAEVLHVASGSVDD 953 >UniRef50_A6PBF3 Cluster: Diguanylate cyclase precursor; n=1; Shewanella sediminis HAW-EB3|Rep: Diguanylate cyclase precursor - Shewanella sediminis HAW-EB3 Length = 467 Score = 34.7 bits (76), Expect = 2.2 Identities = 24/85 (28%), Positives = 44/85 (51%) Frame = -3 Query: 432 IGLTLQHLFAFREQYKTRSVFLYSLNIDLQ*FNRLVASTGIYSNPNRSGKYWVQSCGPNS 253 +G +L ++ R+ +R+ L LN++LQ + + TGIY NR +Y+++S Sbjct: 273 LGFSLLYILQLRKTVSSRTAELRQLNLELQHLASIDSLTGIY---NR--RYFIRSLKDAC 327 Query: 252 RRVNPLPARTLVWYRTVGHRTIGRN 178 R +N + TL+ + +TI N Sbjct: 328 RTMNEEASLTLLLFDIDKFKTINDN 352 >UniRef50_Q17A66 Cluster: Mixed-lineage leukemia protein, mll; n=2; Culicidae|Rep: Mixed-lineage leukemia protein, mll - Aedes aegypti (Yellowfever mosquito) Length = 2874 Score = 34.7 bits (76), Expect = 2.2 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = +1 Query: 388 ILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAP-KSVEDLSLKMKRTSKLI 549 I FP G +V+K E+NEE++ + + P++P+ P P + + +SL R+ LI Sbjct: 2016 IHFP-GLRVIKEESNEEDQTMIFKRMSPIIPIVAPIPIRLKKGISLSSDRSLSLI 2069 >UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|Rep: CG17608-PA, isoform A - Drosophila melanogaster (Fruit fly) Length = 271 Score = 34.3 bits (75), Expect = 3.0 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Frame = +1 Query: 307 VDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 477 +D R+ S+ SLQ + I+E +L+LFP+G + K + +A Q + P+ Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200 Query: 478 PV 483 PV Sbjct: 201 PV 202 >UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L13 - Arabidopsis thaliana (Mouse-ear cress) Length = 87 Score = 33.5 bits (73), Expect = 5.2 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +2 Query: 179 LRPIVRCPTVRYHTKVRAGRGFTLREL 259 LRP+V T++Y+ KV +GFTL EL Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEEL 78 >UniRef50_A3SK38 Cluster: Putative ABC transport system, permease protein; n=1; Roseovarius nubinhibens ISM|Rep: Putative ABC transport system, permease protein - Roseovarius nubinhibens ISM Length = 287 Score = 32.7 bits (71), Expect = 9.0 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -2 Query: 694 FFLFIHFLGFTSLAVGAFVTSSGFSAASFNLLARIPTSLAMERAPL 557 F L L F + A+G ++T F+A +FN+ +P LA A L Sbjct: 23 FSLLFGILKFPNFAIGGYITVGAFAAYTFNVPLGLPLPLAAAAAML 68 >UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putative; n=6; Plasmodium|Rep: Nucleolar GTP-binding protein 1, putative - Plasmodium chabaudi Length = 682 Score = 32.7 bits (71), Expect = 9.0 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 310 DPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEAN 432 DP R+ + +S +QR K Y+ ++ + + KK KGEA+ Sbjct: 618 DPTRKMRIYQSTSTEIQRKKAYKLNIVAYRQIKKGTKGEAD 658 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 669,921,408 Number of Sequences: 1657284 Number of extensions: 13193076 Number of successful extensions: 34223 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 33298 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 34200 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 56198352344 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -