Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30496
(704 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 102 1e-21
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 102 1e-21
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 102 1e-21
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 102 1e-21
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 100 4e-21
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 52 2e-06
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 100 bits (240), Expect = 4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 441
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 442 RKLATQLRGPLMPVQ 486
KLATQL GP+MPV+
Sbjct: 144 LKLATQLTGPVMPVR 158
Score = 99.1 bits (236), Expect = 1e-20
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +2
Query: 32 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 211
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 212 YHTKVRAGRGFTLREL 259
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 644
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +3
Query: 510 RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAE 623
R ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE
Sbjct: 24 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,230,310
Number of Sequences: 237096
Number of extensions: 1993751
Number of successful extensions: 3811
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3781
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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