Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30495
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40948-5|AAA81731.2|  955|Caenorhabditis elegans Hypothetical pr...    61   7e-10
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr...    36   0.029
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr...    36   0.029
AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z75551-4|CAA99934.2|  228|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      28   5.8  
U64853-2|AAB04975.2|  529|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AF039710-9|AAB96685.2|  172|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U40948-5|AAA81731.2|  955|Caenorhabditis elegans Hypothetical
           protein F55D10.1 protein.
          Length = 955

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = +1

Query: 13  ENGERFTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGEALNETVL-GSGLVVRGKH 189
           EN + F+V+TDR+QG  +  +G VE+MLHRR  +DD FGV EAL+E    G+GLV  GKH
Sbjct: 754 ENAQ-FSVITDRAQGMVA-SDGVVEIMLHRRCFYDDHFGVEEALDEPGKDGAGLVAMGKH 811

Query: 190 RIL 198
            +L
Sbjct: 812 IVL 814



 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = +3

Query: 327  VKTPMPDGLHLLTLEPWGDQ-ILLRIENYKTGAEDSTI-EIDLQGIFNGIHIKSVKETTL 500
            +K  +P G+HLLTLE W  +  L+R EN   G E ++I E D   IF    I S KE  L
Sbjct: 858  LKFELPIGIHLLTLEKWHKKSSLIRFENIYHGEEGNSIKEFDPTHIFTNFDIVSFKELLL 917

Query: 501  TAN 509
             AN
Sbjct: 918  GAN 920


>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical protein
            F58H1.1b protein.
          Length = 1145

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
 Frame = +1

Query: 4    IYIENGE-RFTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGEALNE---TVLGSGL 171
            +YIE+   R ++ + ++ G +SL  G++E+ML RRL  DD  G+ + + +   TV    +
Sbjct: 927  VYIEDDTTRMSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGLQQGVRDNKRTVAHFRI 986

Query: 172  VVRGKHRILRSKDPVEIAKSVFQMHLPPWS 261
            V+        +K    +       HL  WS
Sbjct: 987  VIEPMSSSSGNKKEERVGFHSHVGHLATWS 1016


>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical protein
            F58H1.1a protein.
          Length = 1143

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
 Frame = +1

Query: 4    IYIENGE-RFTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGEALNE---TVLGSGL 171
            +YIE+   R ++ + ++ G +SL  G++E+ML RRL  DD  G+ + + +   TV    +
Sbjct: 925  VYIEDDTTRMSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGLQQGVRDNKRTVAHFRI 984

Query: 172  VVRGKHRILRSKDPVEIAKSVFQMHLPPWS 261
            V+        +K    +       HL  WS
Sbjct: 985  VIEPMSSSSGNKKEERVGFHSHVGHLATWS 1014


>AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical
           protein Y39C12A.8 protein.
          Length = 365

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 470 PYQKRKRDNANRKQWLDDYDKWTWNT-EGDFYESF-NKKYGSFE 595
           PY  +   N  RK + ++   ++WNT   D YE F  + Y S++
Sbjct: 162 PYSNQNNFNNTRKDYREEKSGFSWNTGSADDYEDFVYRNYQSYQ 205


>Z75551-4|CAA99934.2|  228|Caenorhabditis elegans Hypothetical
           protein T28H10.2 protein.
          Length = 228

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +2

Query: 173 WFAGNTGSCARR--IRLRSRKAFSKCTCRRGLHF--QRLRPQLRAMDEV 307
           W A + GSC R+  I+   RK+   C  R  L F  +RL PQL+ + ++
Sbjct: 31  WVASDRGSCQRKEYIKKNCRKSCGNCP-RYELKFDTRRLNPQLQPIHQL 78


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 405  NYKTGAEDSTIEIDLQGIFNGIHIKS 482
            NY+TG +DS + + L+ + + +H+ S
Sbjct: 2764 NYQTGVQDSVLAVWLEAVGDAVHLPS 2789


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 405  NYKTGAEDSTIEIDLQGIFNGIHIKS 482
            NY+TG +DS + + L+ + + +H+ S
Sbjct: 2775 NYQTGVQDSVLAVWLEAVGDAVHLPS 2800


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 405  NYKTGAEDSTIEIDLQGIFNGIHIKS 482
            NY+TG +DS + + L+ + + +H+ S
Sbjct: 2775 NYQTGVQDSVLAVWLEAVGDAVHLPS 2800


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 405  NYKTGAEDSTIEIDLQGIFNGIHIKS 482
            NY+TG +DS + + L+ + + +H+ S
Sbjct: 2775 NYQTGVQDSVLAVWLEAVGDAVHLPS 2800


>U64853-2|AAB04975.2|  529|Caenorhabditis elegans Hypothetical
           protein K11G9.2 protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 355 WSPSGIGVLTNFLQFSNLIHCS*LR 281
           W+P G G + + + F    HCS LR
Sbjct: 411 WNPDGFGPVGSIVPFKGAAHCSELR 435


>AF039710-9|AAB96685.2|  172|Caenorhabditis elegans Hypothetical
           protein C46E10.8 protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = -2

Query: 226 SRSQPDPSSAGSGVSREPPAPSREPFRSG-PHXXXXXXRAAISCAA 92
           S   P PSS+G      PPAP      SG P        A+ SC A
Sbjct: 99  SLGSPAPSSSGFATMIVPPAPLLSAISSGSPQLGDTRVLASFSCFA 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,800,346
Number of Sequences: 27780
Number of extensions: 364170
Number of successful extensions: 1409
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)