Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30495
         (713 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   6.6  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   6.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   6.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.8  

>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 233 FSKCTCRRGLHFQRLRPQLRAMDEV 307
           F+ C C   +  + L+ QLR + E+
Sbjct: 8   FAFCICVNAMTIEELKIQLRDVQEI 32


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 127 GVGEALNETVLGSGLVVRG-KHRILRSKDPVEIAKS 231
           G+G+ L E ++G G+ V G   ++ + K  VE  KS
Sbjct: 18  GIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKS 53


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 564 KASTRNTGASRP*TKLSTDLTSE 632
           K+S  +TG+S P   LST L S+
Sbjct: 357 KSSESSTGSSIPKLNLSTALMSQ 379


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 500 NRKQWLDDYDKWTWNTEGDFYE 565
           N  QWL +YD+   + +G  +E
Sbjct: 290 NSGQWLREYDRELEDFDGRLFE 311


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 382 SPQGSRVSRWSPSGIGVLTNFLQ 314
           +PQG  +S + P G+ +L + ++
Sbjct: 361 TPQGVFLSLYQPQGMNILGDLIE 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,682
Number of Sequences: 438
Number of extensions: 4320
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)